Clinocottus analis (woolly sculpin): 137802677
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Entry
137802677 CDS
T10471
Symbol
vps36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
137802677 (vps36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cana04131
]
137802677 (vps36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cana04147
]
137802677 (vps36)
Membrane trafficking [BR:
cana04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
137802677 (vps36)
Exosome [BR:
cana04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
137802677 (vps36)
Exosomal proteins of colorectal cancer cells
137802677 (vps36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
Xre-like-HTH
TssO
MA3
Motif
Other DBs
NCBI-GeneID:
137802677
NCBI-ProteinID:
XP_068456833
LinkDB
All DBs
Position
Unknown
AA seq
384 aa
AA seq
DB search
MDRFSWSNGLLEINETLVIQQRGVRLYDGDDKAKLDVGVALLSTHRLIWRDVKNHECCIA
MPLSQIHVFEEQAAGIGKSAKIVIHLQGTPANKEPGPYQHSKYSFIKLSFKEHGQIEFYR
RLTEEMTQKRWENTPASQPIPTGTGSQAGRTRAVGIVGIERKIEEKRKETDKNISEAFED
LSKLMVKAKEMVELSRSIANKIKDKQGDITEDETIRFKSYLLSMGIANPVTRETHGSGTH
YHMQLAKQLGDMLQAPLEERGGMMALTEVYCLVNRARGMELLSPEDLVNACKMFESLKLP
LRLRVFDSGVMVVQLQSHSEEEMIASALDNVSDKGSLTAEEFAKLLGLSVLLSKERLLLA
EKMGHLCRDDSVEGLRFYPNLFCS
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcttttcgtggtcaaatgggctcctggaaataaacgaaactttagtgatccag
caacgtggtgtcagactgtatgacggtgatgataaggctaagcttgacgttggggttgcc
ttgttgagcacccatcggttgatctggagggacgttaaaaaccacgaatgctgcatagcc
atgcccctgtcacagatccacgtctttgaggagcaggctgcaggaataggaaagagtgca
aaaatagttatccacctgcaaggaacacctgccaacaaggagccaggtccctaccaacat
agcaaatactccttcatcaagctgtccttcaaagaacatgggcagattgagttttacagg
aggctaactgaagaaatgactcagaagaggtgggagaatacaccagcttcacaacccatc
cccacaggaaccggttctcaggcaggaagaacacgtgccgtggggattgttggcattgag
aggaagatagaggagaagaggaaagaaacagacaaaaacatttctgaggcctttgaggat
ctcagcaagctgatggtgaaggctaaggagatggtggagctgtccagatctatagccaac
aagatcaaagacaagcagggagacattacggaagatgagacaattcggtttaagtcctac
ctgctgagcatgggtatcgctaaccccgttaccagagaaacgcatggatcaggtacacat
taccatatgcagctagctaagcagctgggcgatatgctacaggctcctctagaggagcgt
gggggtatgatggctctcacggaggtgtactgtctcgtcaaccgtgctcgagggatggag
cttttatctccagaagatttggtaaatgcctgcaagatgtttgagtcgttgaagctccca
ttgaggctgcgtgtgtttgacagtggtgtgatggtggtccagctgcagtctcacagcgaa
gaggaaatgatagcctcagcactggacaatgtgtccgataaaggctctttgacagcagag
gaatttgcaaagctcctgggtctctctgttcttctctcgaaagaaagattgttgctggct
gagaagatgggccacctgtgtcgagatgactctgttgagggtttgagattctacccaaac
ctcttttgttcatag
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