Clinocottus analis (woolly sculpin): 137802726
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Entry
137802726 CDS
T10471
Symbol
ddx52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
cana Clinocottus analis (woolly sculpin)
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cana03009
]
137802726 (ddx52)
Enzymes [BR:
cana01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
137802726 (ddx52)
Ribosome biogenesis [BR:
cana03009
]
Eukaryotic type
90S particles
Helicases
137802726 (ddx52)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
137802726
NCBI-ProteinID:
XP_068456902
LinkDB
All DBs
Position
Unknown
AA seq
687 aa
AA seq
DB search
MDAFELFRKLGAGAKFDLKRFGQDAARFQVARSHVGEASEDALSAIDYFGTGLTSRAQSS
PVGLDGGGDDDDDDEENEVESEESGAGGKRKQRDEEKVLRKKKKRTKSDQVEAAGGPLKD
MAESGITWTSSLDRKTENLPGDGKEKSSLKRMKHLHQEKVNRIRSQHRINVHGCDVPDPV
STFEDLQSEYRLNPRVLQNLKDAGLSSPTAVQMQAIPLMMHGRELLACAPTGSGKTLAFC
LPLLAQLQQPANLGFRAVVISPTRELANQTYRELLRLSEGVGFRVHILDKASLAAKKYGP
QSNKKYDILVSTPNRLVFLLKQDPPALELSSVEWLVVDESDKLFEGGKTGFREQLAAVFL
ACSGSKVRRAFFSATCTPDVEQWCRLNLDNLVSVNIGHRNTAVDSVEQKLLFVGTENGKM
VAMRDIIKKGFLPPMLVFVQSIDRARELFHELVYEGINVEVIHADRTQQQRDNVVNSFRS
GKIWVLICTALMARGIDFKGVNLVLNYDFPTSAVEYIHRIGRTGRAGHQGKAITFFTEND
KPLLRSIANVIKQAGCPVPDYMIGFKKIHSKVKRRLENKPPTRSTICSTPRILMKKKGKV
TNKGQKGEKQLVGGEQKEEKIPQTPVLQQKGEKKTKGQASKSRNKTQKQGGSEKHKKTTS
NSSGAKLKKRKGRKNKPQEDQKRVAED
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggacgcctttgagttgtttcggaaactcggagctggagctaaatttgacctgaagagg
tttggtcaagacgccgctcggtttcaggtcgccagatctcacgtcggagaagcgtccgag
gatgctttatctgcgatcgattattttggcacaggactaaccagtagagcccagagcagc
cctgtaggactggatggtggtggagatgatgatgatgatgatgaggaaaatgaagtggaa
agtgaagaatctggtgcaggaggcaaaaggaagcaaagggatgaagagaaagtcttgagg
aaaaaaaagaaaagaacgaaaagcgaccaggtggaagctgctggtggaccactaaaagac
atggcggaaagcggcatcacatggacctcctcattagaccgaaagaccgaaaacctgccg
ggcgacgggaaggagaaatcctcgctgaagaggatgaagcatcttcatcaggaaaaggtc
aatcgcattcgctctcaacaccgtataaacgtgcacggctgcgacgtacctgaccctgtg
agcacgtttgaggaccttcagtccgagtatcggctcaaccctcgtgtcctccagaacctc
aaagacgcggggctgagctccccgacggcagtacagatgcaggcgataccgctcatgatg
catggtcgggagctcctggcttgcgctcccacaggatcgggaaagactttggctttctgt
ctcccgctgctcgcccaactgcagcagccggccaaccttggcttcagagctgtagtcatc
tccccgaccagagagctggccaaccagacctacagagagttgctccgcctgtcagaggga
gtaggatttagagttcacatcttagacaaagcttctctggcagccaagaagtatggacca
cagtcaaacaaaaaatacgatatactcgtcagtactccaaacagactggtattccttctc
aagcaggatcctccagctctcgagttgagcagtgtggagtggctggtggtcgatgagtcc
gataagctgtttgagggcggtaagaccggcttcagggagcagctcgctgcagtttttctg
gcctgctctggatcaaaggtgcgcagggctttcttcagcgccacctgcacgccagatgtg
gagcagtggtgccgtctgaaccttgacaacctggtgtctgtcaacattggacacagaaat
acggccgtcgattcagtggaacagaagctgctgtttgtcgggacggagaacggcaaaatg
gtggctatgagggacatcatcaaaaagggtttcctgcctcccatgctggtgtttgtgcag
tctatagaccgagcacgggagcttttccatgagttggtgtacgagggcatcaatgtagag
gtgatccatgcagaccgcacacagcagcagagggacaacgtagtgaacagtttcaggtct
ggtaaaatttgggtgttgatctgcacggctctgatggccagaggaattgacttcaaagga
gtcaatctcgtgctgaactacgacttccccaccagcgctgtggagtacatccaccgaatt
ggtcggactggtagagccggacatcaggggaaggccatcaccttcttcacagaaaatgac
aagccactgctgcgcagcatcgctaatgtcataaaacaagccggctgtcctgtacccgac
tacatgattggctttaagaaaatacacagtaaggtgaagcggagacttgagaataaacct
cccacaagaagcaccatttgctcaactcctcgcatcttaatgaagaaaaaaggaaaagtg
acaaataaaggacagaagggagaaaagcagctagtgggtggagagcagaaagaggaaaag
atacctcaaacaccagtgctgcagcagaaaggagaaaagaaaacaaaaggacaggcgtca
aagagtagaaataaaacacagaagcaagggggaagtgagaagcacaagaagacgacatcc
aattcctctggagccaagctaaaaaagagaaaggggaggaaaaataagccacaagaggac
cagaaaagagtggcagaagactga
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