Clinocottus analis (woolly sculpin): 137803059
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Entry
137803059 CDS
T10471
Symbol
lamc1
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04510
Focal adhesion
cana04512
ECM-receptor interaction
cana04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137803059 (lamc1)
04518 Integrin signaling
137803059 (lamc1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
137803059 (lamc1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
Alanine_zipper
Peptidase_M16
DUF6061
DUF7979
MobI
Motif
Other DBs
NCBI-GeneID:
137803059
NCBI-ProteinID:
XP_068457425
LinkDB
All DBs
Position
Unknown
AA seq
866 aa
AA seq
DB search
MRFLLRALVAWCWAAACGRAAMDECSDEQHRAQRCMPEFVNAAFNVTVAATNTCGSPPEE
YCVQTGATGVTKSCHICDARDPRNHHSAVYLTDYNNQQDTTWWQSQTMLAGVQYPNSINL
TLHLGKSFDITYVRLKFHTSRPESFAIYKRSSEAGPWVPYQFYSGSCQKTYRKPGRGFIR
TGEDEQQALCTDDFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQVNFFGFSASGCKPC
DCDPEGSRSAQCQEVGRCECRPGFVGARCDMCEENYFYNRSAPGCQQCPSCYSLVRDKVN
QQRQKLHDLQTLIDGLGSGRDAVTDEAFEDRLKEAEKAVMELLEEAQASKDVDRGLLDRL
SGINSTLTTQWNRLQSIRSTVDDTGTQADRARHRVRDAEDLIDRARQELDKAKDAVGKVD
IKPPSGTGDPNNMTLLAEEARTLADKHKMDADQIEKIAKDANDTSTKAHNLLLKTLEGES
RTSQEIDELNKKYNEAKELAKNLEKQANKVQAEAEDAGDKALKIFANLTSVPALDPKALE
DEASKIKKEASDLDKLIDKTEKEYNDLRDDLRGKEQEVRKLLEKGRSEQQTADQLLARAD
AAKALAEEAARKGQSTFREAEGILEDLRDFDRRVNDNKTAAEDAMKKIPAINATIMAANQ
KTQQAEAALGNAAADAREAKEKAEEAEKIASSVQKGSAKTKQEAEAAFQDTSELDGQVGA
MMDQLDAAERELLRKKAEADGDMMMAGMASDNAKEAEDNARKAKSAVKTVLTTITVLLDQ
LGNIDKVDLSKLNQIDESLKRAKGKMADSALDRKLTELNDAARSQEDMILDYDRQIREIR
ADIANLNDIKNTLPEGCFNTPSLERP
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgcgatttttgctccgggctctggtggcctggtgctgggcggcggcgtgcggccgcgcg
gccatggacgagtgctcggacgagcagcaccgcgcgcagcgctgcatgccggagttcgtg
aacgccgccttcaacgtcacggtggcggccaccaacacctgcgggtccccgccggaggag
tactgcgtgcagaccggcgccaccggcgtcaccaagtcctgccacatctgcgacgcccgc
gacccccggaaccaccacagcgccgtgtacctgaccgactacaacaaccagcaggacacc
acctggtggcagagccagaccatgctggcgggggtccagtacccgaactccatcaacctc
accctgcacctcggtaaatccttcgacatcacctacgtgcggctgaagttccacaccagc
cgcccggagagcttcgccatctacaagcgcagctcggaggcgggcccctgggttccgtac
cagttctacagcggctcctgccagaagacgtaccgcaagccgggccgcgggttcatccgc
accggagaggacgagcagcaggcgctctgcaccgacgacttcagcgacatctcgccgctc
accggcggcaacgtggcgttctccacgctggagggccggcccagcgcgtacaacttcgac
aacagcccggtgctgcaggtcaacttcttcggcttcagcgcatctggatgcaaaccctgt
gactgcgaccccgagggctcccgctccgctcagtgtcaggaggtcgggcgctgcgagtgc
cgtcccggcttcgtgggcgcgcgctgcgacatgtgtgaggaaaactacttctacaaccgc
tcagcgccgggatgccagcagtgcccgtcctgctacagcctggtgcgggacaaggtgaac
cagcagaggcagaagctgcacgacctgcagaccctgatcgacggcctcggctccggccgc
gacgccgtcaccgacgaggccttcgaggaccgactgaaggaggcggagaaagcagtgatg
gagctgctggaggaggcgcaggccagcaaagacgtggaccgcgggctgctggaccggctg
agcggcatcaacagcacgctgaccacgcagtggaaccggctgcagagcatccgcagcacg
gtggacgacaccggcacgcaggccgaccgcgcccgccaccgcgtccgcgacgccgaggac
ctgatcgaccgcgcccgccaggagctggacaaggccaaggacgccgtgggcaaagtggac
atcaaacccccgagcggcaccggagacccgaacaacatgacgctgctggcggaggaggcg
cgaacgctggccgacaaacacaagatggacgccgaccagatcgagaagatcgccaaagac
gccaacgacacgtcgaccaaagctcacaacctgctgctgaagactctggagggagagagc
aggacgagccaggagatcgacgagctcaacaagaagtacaacgaggccaaggagctcgcc
aagaacctggagaaacaggccaacaaggttcaggccgaggccgaagacgccggagacaaa
gccctgaagatcttcgccaacctgacgagcgtcccggcgctggaccccaaggccctggag
gatgaagccagtaagatcaagaaggaggcgtccgacctcgacaagctcatcgacaagacg
gagaaggagtacaacgacctgcgagacgacctgcggggcaaagagcaggaagtgcgcaag
ctgctggagaaaggaaggagcgagcagcagactgcagaccagcttctggctcgagccgac
gccgccaaagctctggctgaggaggcggcgaggaaaggccagtccaccttcagggaggcc
gagggcatcctggaggacctcagggactttgacaggcgggtgaacgacaacaagacggcg
gcggaggacgccatgaagaagatcccggccatcaacgccaccatcatggccgccaaccag
aagacccagcaggccgaggcggcgctcggcaacgcggccgccgacgcccgggaggccaag
gagaaggcggaggaggcggagaagatcgccagcagtgtgcagaagggctcggcgaagacg
aagcaggaagcggaggcggcgttccaggacaccagcgagctggacgggcaggtgggcgcc
atgatggaccagctggacgccgccgagcgggagctgctccgcaagaaggccgaggccgac
ggcgacatgatgatggcgggaatggcgtcggacaacgccaaggaggccgaggacaacgcc
cgcaaggccaagagcgccgtgaagacggtgctgaccaccatcaccgtgctgctggaccag
ctggggaacatcgacaaagtggacctgagcaaactgaaccagatcgacgagtccctgaag
agggccaagggcaagatggccgacagcgctctggaccgcaagctgacggagctgaacgac
gcggcgcgctcgcaggaggacatgatcctcgactacgaccggcagatccgagagatccgc
gccgacatcgccaacctcaacgacatcaagaacacgctgccggagggctgcttcaacacg
ccgtccctggagcggccgtag
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