Clinocottus analis (woolly sculpin): 137803310
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Entry
137803310 CDS
T10471
Symbol
grin1b
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1b isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04020
Calcium signaling pathway
cana04080
Neuroactive ligand-receptor interaction
cana04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
137803310 (grin1b)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
137803310 (grin1b)
04082 Neuroactive ligand signaling
137803310 (grin1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cana04040
]
137803310 (grin1b)
Ion channels [BR:
cana04040
]
Ligand-gated channels
Glutamate (ionotropic)
137803310 (grin1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
SIP
Peripla_BP_6
DUF6724
Motif
Other DBs
NCBI-GeneID:
137803310
NCBI-ProteinID:
XP_068457741
LinkDB
All DBs
Position
Unknown
AA seq
905 aa
AA seq
DB search
MELRAVLLLAVLQCCSVARGGCEPRLVNIGAVLSQKRYEQVFKEAVSQANALYGKDKFKM
NAISVTHKPNAIQMALSVCEDLISNQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVLG
LTTRMSIYSDKSIHLSFLRTVPPYSHQAHVWFDLMREFRWNHIILIVSDDHEGRAAQKRL
ETLLEERETKTKNRNYETLDQHNFDFRRTPKAEKVLLFSPDTNLTALLLEAKDLEARVII
LSASEDEAAAVYKAARQLNMTGSGYVWLVGEREMTGRALSEAPDGLLGLQLINGKNESAH
IADAVAVVAQSLQELFEKENITEPPRGCVGNTNIWRTGPLFKRVLMSSKYPDGLTGRIEF
NDDGDRRFATYSILNYQQKPGRLVQVGVFNGSQVVMNPQRKIIWPGGETEKPVGYQMSTK
LKIVTIHQEPFVYVKPTKADGTCREEFTVNGVLIKKVICTGPNGTTPGQPIVPQCCYGFC
IDLLIKLAMSMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTI
NNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYL
LDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGF
AMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVEL
STMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFG
IGMRKDSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFML
VAGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQPYPTDITGQLNLSDPS
VSTVV
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atggagcttcgcgccgtgctcctcctcgccgtgctgcagtgctgctccgtcgctcgcggc
ggctgcgagccccggctggtgaacatcggcgcggtgctgagccagaagcgctacgagcag
gtgttcaaggaggcggtgagccaggccaacgccctgtacggcaaggacaagttcaagatg
aacgccatctccgtcacgcacaagcccaacgccatccagatggccctgtccgtctgtgag
gacctcatctccaaccaggtgtatgcgatcctggtcagccaccctcctcagtccaacgac
cacctgactccgacacccgtctcctacaccgccgggttctaccggatccccgtgctgggt
ctgaccacgcgcatgtccatctattcggacaagagcatccacctgtccttcctgaggacg
gtgcccccgtactcccaccaggcccacgtctggttcgacctcatgagggagttcaggtgg
aaccacatcatcctcattgtgagcgacgaccacgaaggacgagccgctcagaagagactg
gagacgctgctggaggagcgcgagaccaagactaaaaacaggaactatgaaaccctcgac
caacacaactttgacttcaggagaacgcccaaggcggagaaggtgctgctgttcagcccg
gacaccaacctgacggctctgctgctggaggccaaagacctggaggcccgagtcatcatc
ctctctgccagtgaggatgaagctgccgctgtgtacaaagcggcccggcagctcaacatg
accggatccggctacgtctggctcgtgggagagagagagatgaccggcagagctctgagt
gaagctccagatggcctgctgggcctccagctgattaacggtaagaacgagtcggctcac
atcgcggacgccgtggccgtggtggcccagtctctgcaggagctgtttgagaaggagaac
atcacggagcctccgcggggctgcgtgggcaacaccaacatctggaggaccgggccgctc
ttcaaacgagtgctgatgtcatccaagtacccggacggcctgacgggccgcattgagttc
aacgacgacggcgaccgccgcttcgccacctacagcatcctgaactaccagcagaagccg
ggtcgcctcgtccaggtcggagtcttcaacggatctcaggttgtgatgaaccctcagagg
aagatcatctggcctggaggggagacagaaaaaccagttggataccagatgtcaactaaa
ctgaagatcgtgacgatccatcaggagccgtttgtttacgtgaagccgacaaaagctgac
ggcacgtgtagagaagagttcacggtgaacggggttctgatcaagaaggtgatctgtacc
ggacccaacgggaccacaccaggtcagcccatcgtccctcagtgttgctatggtttctgc
atcgacctgctcatcaagctggcgatgagcatgaacttcacctacgaggttcacctggtg
gctgatgggaagtttggcacgcaggagcgcgtgaacaacagtaacaagaaggagtggaac
ggcatgatgggagagctgctgggaggactggccgacatgatcgtggctcctctcaccatc
aacaacgagcgcgcccagtacatcgagttctccaaaccgttcaagtaccagggcctcacc
atcctggtgaagaaggaaatccctcgcagcactctggactcgttcatgcagccgttccag
agcacgctgtggctgttagtcggtctgtcggtccacgtggtggcagtgatgctttaccta
ttagaccggttcagcccgtttggaaggtttaaagtaaacagtgaagaagaagaagaagac
gccctcaccctgtcctctgccatgtggttctcatggggagtgctgttgaactctgggata
ggagaaggagctcccaggagtttctcagcgaggattctgggtatggtgtgggcaggtttc
gctatgatcatcgtagcgtcctatactgccaacctggcagccttcctagtgttggaccgg
cctgaggagcgcatcactggcatcaacgaccccaggctgcgtaacccgtcggataagttc
atctacgccacggtgaagcagagctcggtggacatctacttcaggaggcaggtggagctg
agcaccatgtaccgccacatggagaagcacaactacgagagcgccgccgaggccatccag
gccgtcagagacaataagctgcatgccttcatctgggacagcgctgtcttggagttcgag
gcgtctcagaaatgcgacctggtgacgaccggagagcttttctttcgctctggatttggg
attggaatgaggaaggacagtccctggaaacagaacgtgtctctggctattctcagctct
catgagaatggcttcatggaggatttagacaagacgtgggttcgataccaggaatgtgac
tccaggagtaacgcccccgctaccctcacctttgagaacatggcaggtgtgttcatgctg
gttgccgggggcatcgtcgccgggatcttcctcatcttcatcgagatcgcctacaaacga
cacaaagacgctcgaaggaaacagatgcagctcgccttcgctgctgtgaacgtctggagg
aagaacctgcagccgtacccaactgacatcaccggccagctcaacctatcagatccctcc
gtcagcaccgttgtctga
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