Clinocottus analis (woolly sculpin): 137803359 Help Entry 137803359         CDS       T10471                                  Symbol col4a1 Name (RefSeq) collagen alpha-1(IV) chain   KO K06237   collagen type IV alpha Organism cana  Clinocottus analis (woolly sculpin) Pathway cana04382   Cornified envelope formation cana04510   Focal adhesion cana04512   ECM-receptor interaction cana04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:cana00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     137803359 (col4a1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     137803359 (col4a1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     137803359 (col4a1)  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     137803359 (col4a1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:cana04147]     137803359 (col4a1)    00536 Glycosaminoglycan binding proteins [BR:cana00536]     137803359 (col4a1) Exosome [BR:cana04147]  Exosomal proteins   Exosomal proteins of other cancer cells    137803359 (col4a1) Glycosaminoglycan binding proteins [BR:cana00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    137803359 (col4a1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  137803359 NCBI-ProteinID:  XP_068457854 LinkDB All DBs Position Unknown AA seq 1587 aa AA seqDB search MGFPGMQGHEGPAGPMGPTGGLGEPGAFGLKGVRGPPGLPGFPGNPGLPGINGNDGPPGA HGIPGCNGTKGDRGRDGTPGYSGLQGPPGISGVPGMKGDPGGVIGIVPLKGDRGFPGTPG FPGPSGSLGPIGPPGNRGYQGPKGETGLPGPPGEMGDKLSFESEKGDKGDPGFRGPPGPP GPPAQGVEGHTTVHIPGPPGAKGRLGDKGDKGFCIPHHAGVKGEAGPPGSIGKSGKAGED GLKGEKGFVGSVGYTGSQGEKGERGPPGHGDGSPGPPGSPGFPGLEGEKGFPGPQGEAGA PGRYVDGPQGESGQKGSAGEKGDKGVEGESLVGPPGQPGSSGPPGPPGPPLDRLQCDVEK GAPGPPGPPGLQGELGQKGDVGDTCVQCESYGPPGLPGPLGPKGDRGPPGLVGGKGQKGE SGSSGEPGRPGAEGAPGLMGAPGAVGEPGDVLALPGLKGDKGLTGASGTPGRPGRDGAPG RDGAPGFPGSKGESAREGMKGERGPEGEPGLIGPPGDQGPAGLPGFGRPGESGEKGSQGR PGIPGAPGPAGIKGESGKGVSTPGPQGVPGPEGKTGLPGLPGDKGLHGDAGVPGFPGPKG EQGPPGIGFPGLTGPKGISGIPGASGLPGEPGRPGPDGLTGQPGTPGPKGEPGRGLPGLK GSQGPSGLVGFQGEKGVIGLPGVPGREGQTGPAGPQGAKGDVGPPGTPGQVGLPGAPGKG SPGAPGPQGPAGDQGPYGEEGVKGEKGYPGPSGLDMPGPQGEKGGSGFPGPSGSKGLPGP PGFPGRDGLIGNQGSKGEMGVIGTPGVPGFPGPPGTAGSTGLRGDPGNTGPRGVNGEPGT KGERGDQGLQGPPGNMSDVDMEHMKGEKGDLGSIGDPGGTGEKGHRGLSGNPGMPGKDGE PGLPGQPGEKGDPGFPGEPGRMGPGGQKGTVGEMGVPGVPGSKGTKGDIGTSGHPGARGT DGQKGDKGTPGDPGIGLPGLPGDKGHTGQPGFPGSPGERGPKGHEGMSGQPGLPGTRGEK GLVGYTGQSGRPGEKGSPGLPGAAGESGHDGRPGEAGLQGPPGVPGEKGDPGVDGIPGSS GERGEPGLAGQAFPGPPGVLGGKGDKGSSGFPGTPGHPGVSGIKGDKGLPGSLGPPGETG ERGPTGVSLPGPKGQKGEAGPSGESGTPGGPGPSGLPGRQAQKGDKGDQGLPGFQGELGH KGDPGAPGLHGQSGLPGIDGQIGERGLQGVPGFPGVRGNSGDIGFKGEVGDRGFPGEIGK DGPPGPPGPSTFTKGDIGFPGVQGLPGPQGPYGFPGQKGQQGMTGVPGPKGDDGIPGYDG QPGGKGDPGLPGPQGPRGYPGPSGPDGVPGQVGHPGPSSMDHGFLVTRHSQTVEVPLCPE GTSLIYDGYSLLYVQGNERSHGQDLGTAGSCLRKFSPMPFLFCNINNVCNFASRNDYSYW LTSPEPMPMSMAPIGGEGIKPFISRCSVCEAPAMVIAIHSQTIMIPACPGGWDSLWIGYS FVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATVEDSDMF RKPVPTTLKAGSLRTHISRCQVCMKRT NT seq 4764 nt NT seq  +upstreamnt  +downstreamnt atgggattcccagggatgcagggacatgaaggtcctgcaggcccgatgggccccacggga ggtctgggagaacccggagcttttggactgaaaggagtgcggggtcctcctggtctgcca ggcttcccaggaaacccaggacttccaggcatcaatggaaatgatggcccaccaggtgca cacggtatcccaggatgcaacgggactaaaggagacagaggcagggatggtactcctggt tattctggtcttcaaggccctcctggcatctcaggagttcctgggatgaagggcgaccct ggtggcgttatcggcatcgttcccctgaaaggagacagagggttcccgggcacacctgga tttcctggacccagtggctctctgggaccgatcggacctccagggaatcgaggctatcaa ggacccaaaggtgaaaccggcctgcccggtcctcctggagagatgggtgacaagctgtcc tttgagagtgagaaaggagataagggcgacccgggcttcaggggcccccccggacccccc ggcccccccgcacagggcgtggagggacacaccacggtgcacatcccgggtccaccggga gcgaaaggacgactcggagacaaaggagacaaaggcttctgcatcccacatcatgctgga gtcaagggggaagccggtcctcctggatcaataggtaaatctggaaaggctggagaggac gggctgaagggagagaaaggcttcgtgggctcggttggatacaccggctctcagggtgaa aagggagaaagaggacctccaggtcatggcgacggctccccgggtcctcccggctctccg gggtttccagggttagaaggagagaaagggtttcctggtcctcaaggagaggcaggtgca ccaggccgctacgtggacggccctcaaggggagagcggccagaagggaagcgctggagag aaaggagacaaaggcgtggagggagagtctctcgttggacctccaggacaaccggggagc tccggaccgccgggaccgccgggaccgccgctggaccgtcttcagtgtgacgtagagaaa ggtgctccgggcccacctggacctccaggacttcagggggaactgggacagaaaggtgac gtaggagatacctgtgttcagtgtgaaagctacggcccacctgggctacctggccccctc ggccctaaaggcgaccgaggacctccagggctggtcggtggtaagggacagaagggagag tcgggttcttctggagaaccgggacgacctggcgctgaaggagccccggggctgatggga gcaccaggtgccgtcggggagccgggggacgtcctggccctccccggtctgaagggggac aaaggcctgaccggtgcttctggcactccggggcggccgggccgggacggagcgccgggc cgggacggagcgccgggtttcccgggctccaagggagagtcggccagagaaggcatgaag ggcgagcgaggaccagaaggagagcccggtctcattgggcctccaggagatcaaggacca gctgggctgccggggttcggacgaccgggagagtctggagagaagggcagtcaagggagg ccgggcatccctggagcgcccggtccagctggaattaaaggagaatcaggaaaaggtgtg agcactcctggacctcaaggagttcctggaccagaaggaaaaaccggcttacctggactt ccaggagacaaaggcctgcacggagacgccggggtgcctgggttccctggacctaaggga gaacaaggcccccctgggattgggtttccaggcctcactggccctaaaggaatcagtgga attccaggagcgtcgggattaccaggagagcctggaagaccgggaccggacggcttgaca ggacagccgggaacacctggcccgaagggggaaccaggacggggtcttccaggcttaaaa ggttctcaggggccctcaggactggttggcttccagggagaaaagggcgtcattggactt cctggcgttcctggacgagaaggccagacgggcccagcaggccctcagggagccaaaggt gacgtgggacccccaggaactcctggacaggtgggcttaccgggagctccaggtaaaggc tctcctggagctcctgggccacaaggaccagctggagatcaaggaccgtacggtgaggaa ggagtgaagggggagaagggctacccgggtccttctggtctggacatgccgggtcctcag ggggagaagggaggctccgggttcccagggccctcgggttctaaaggacttcccggacca ccgggcttccctggcagggacggactcattgggaatcaaggctctaaaggtgaaatgggg gtcatagggacaccaggagtaccaggattccctggcccacctggtacagctggatccact ggacttagaggtgatccaggtaacaccggacctcgaggggtcaatggagagcctggtact aaaggagaaaggggagatcaaggtctccagggtcctcctggaaacatgagcgacgtggac atggagcacatgaagggggagaagggagacctcgggagcatcggtgaccctggcggcact ggagagaaaggtcatcgtggactgtctggaaaccctggaatgccaggcaaagatggagag cccggattacctggacagccaggtgagaaaggagaccctgggtttcctggagaacccggc aggatggggccgggcgggcagaagggcaccgtgggggagatgggggtcccaggtgtgcct ggttctaaggggactaaaggagatatcggtacatcgggtcaccctggagccagaggcaca gacggacagaaaggagacaagggaacacctggtgatccaggtattgggcttccagggctt ccaggagataagggtcacaccggccagccgggcttcccaggatcacctggtgagagaggt ccgaaggggcacgagggaatgtcgggccagccgggactcccagggacccgaggagagaaa ggactcgttggttacacaggtcagtctggtagaccaggagagaagggaagcccggggctg ccgggagctgctggagagtctggtcatgacggtcggcctggtgaagccggcctgcagggc ccgcctggtgttcctggagagaagggagatcctggagtggacggtatccctggatcctca ggagagagaggagagccaggtttagctggacaagcgttccctggacctcctggggtactg ggtggcaaaggtgacaaaggcagcagtggcttccctggcactccaggtcacccaggtgtc tctggcatcaaaggggacaagggacttccaggctccctgggccccccaggagagaccggg gagagggggcccacaggtgtctctctgccgggccccaagggacagaagggggaggcgggg ccatctggagaatcaggaaccccaggaggcccgggaccctcgggcctgcccggcagacag gcccagaagggggacaaaggagaccaaggcctccctggtttccagggagagctgggccac aagggagaccctggagctccaggacttcatggacagtcaggccttccaggtatcgatgga cagatcggagagagaggactgcagggcgtccctggcttcccaggtgtgagaggtaactcc ggggacattggattcaaaggagaagttggagacagaggattcccaggagaaataggcaag gacggcccccccggcccgcccggccccagcaccttcaccaaaggagacatcgggttccca ggagtccaagggctgccgggcccccaggggccttatggctttcctggacagaaaggacag caaggtatgacaggtgtcccggggccaaaaggagatgacggcatccctggatacgacggt cagcctggagggaaaggagatccaggtcttccggggccacagggacccagaggatacccc ggcccctcggggcccgacggcgttccgggtcaggtgggccaccccggcccctcctccatg gaccacggcttcctggtgacgcgccacagccagacggtggaggttcctctctgccccgag ggaacgtcactcatctacgacggatactcactgctctacgtgcagggaaacgagcgctcg cacggccaagacctgggtacggccggcagctgcctgaggaagttcagcccgatgcccttc ctgttctgcaacatcaacaacgtgtgcaactttgcgtctcggaacgactactcgtactgg ctcacgtccccggagcccatgcccatgagcatggcgcccatcggcggggagggcatcaag cccttcatcagcaggtgttctgtgtgtgaggcgcccgccatggtcatcgccatccacagc cagaccatcatgatcccggcgtgccccggcggctgggactccctctggatcggctactcc tttgtgatgcacaccagtgccggtgccgagggctcgggtcaggctctggcctctccgggt tcttgcctggaggaattccgcagcgctccgttcatcgagtgtcacggccgaggaacctgc aactactacgccaactcctacagcttctggctggccacggtggaggacagcgacatgttc aggaaacctgtccccacgacgctgaaagcaggaagcctccggacgcacatcagccgctgc caggtgtgcatgaagaggacctag

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