Clinocottus analis (woolly sculpin): 137803435
Help
Entry
137803435 CDS
T10471
Symbol
casc3
Name
(RefSeq) protein CASC3 isoform X1
KO
K14323
protein CASC3
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana03013
Nucleocytoplasmic transport
cana03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
137803435 (casc3)
03015 mRNA surveillance pathway
137803435 (casc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cana03019
]
137803435 (casc3)
Messenger RNA biogenesis [BR:
cana03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
137803435 (casc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
TFIIA
Motif
Other DBs
NCBI-GeneID:
137803435
NCBI-ProteinID:
XP_068457991
LinkDB
All DBs
Position
Unknown
AA seq
791 aa
AA seq
DB search
MADRRRRRRRASQDSEDDDDESGSGSDSGRSGSPTSKSRVKDPDPPEETAARVEPKVKAE
SECESEDGVGEAVLSDYDSADPEENGSHSEGAEEEAEQFSDEEAPAAASEAEPPAAAQQQ
EEEQEVQEEVEVEKEEEPEEGQEEEQRQRQQQQQQQQQQQQQEEEEEEEEKEAQEEEGGR
SKEENRAEEKENLSGERQSGDGQESTDDPEKNPAGEPGQKLDDDEDRKNPAYIPRKGLFF
EHDVRGHAQEEERPKGRNRKLWKDEGRWDHDRFREEEQAPKSREELIAVYGYDIRNGGAA
ERVHRQRRPRQSSSPGRDKRWRDGGERPVRSWQGGGGGGGGGGPNRAAPPSSLHPSLSCP
SPHPSRAPPRSRPPSYRNNESSAPPVPRERHGPKAACDPSGGVAFRGVASRGVAVRAPGR
SGGRGPCVVIEDVRDQDPSVGAPASSQPGGYRSASPPKRQQDQRGGGDRAASGLAASSDP
ALQSTNREASPPAERPVERKSYALARRTRSRPADLGSKQASVEEPATPAPSGVGGKSWGD
GGGGGGGGGGGGAAAAAAAAAAAAAALEQLDQDVARLSLAGQNWSPSPTSYFRSEMRGLP
GSLHLPASPPQFPNMEEMGVGSNRAKRYSSQRQRAGPEPAPPIHLGVMEGHYYEPMSYQG
PIYAHGDGPAPIPPQGMLVQPEMHLPHPGLHPHQSGGPISSPALYGGPPVPLSPGQPQQL
LPPPFYPPPGVMTFPYPTMYPTPQAQAQVTYGGVTYYDTVQQQAQPKPSPPRRTSQPVTV
KPPPELHFVSE
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcggcgaaggaggaggcgcgcgtcccaagacagcgaggacgacgacgat
gagtccggctcgggttcggacagcgggaggtccgggtccccgaccagcaagagccgcgtg
aaggacccggacccaccggaggagaccgcggcccgggtggagcccaaagtcaaggcggag
tccgagtgtgagagtgaagacggagtgggagaagcggttctctctgactacgacagcgcc
gacccagaagagaacggctcccattcagagggagctgaagaggaggcggagcagttcagc
gatgaagaagctccagcagccgcaagcgaggctgagcctcctgcagccgcccagcagcag
gaggaggagcaggaggtgcaggaggaggtagaggtggaaaaggaggaggaaccagaggag
gggcaagaggaggagcagcggcagcggcagcagcagcagcagcagcagcagcagcagcag
cagcaggaggaagaggaggaggaagaagagaaggaggcgcaggaggaggaaggaggacgc
tctaaagaggagaacagggctgaggagaaggagaacctgtctggagaacgacagagtgga
gacgggcaggagtcgacagacgaccctgagaagaacccagctggggaaccgggtcagaag
ctcgacgatgacgaggaccgtaagaacccggcctacatcccgaggaagggtttgttcttt
gagcacgacgtgagaggccacgcccaggaggaggagagacccaaaggccgcaacaggaag
ctgtggaaggacgagggccgctgggaccacgaccgcttcagagaggaggagcaggcaccc
aagagccgcgaggagctcatcgccgtctacggctacgacatccgcaacgggggagccgcc
gagcgtgtgcaccgccagcgccggcccagacaaagttcgtctcccggcagagacaagcgg
tggagagacggaggagagcgtccggtccggtcctggcagggaggaggaggaggaggagga
gggggaggaccgaaccgagcagctcctccctcgtccctacacccctccttgtcgtgcccc
tccccacacccttcccgggcgccgccccgcagccgcccgccctcatacaggaacaacgaa
tcgagcgcgcccccggtgccccgagagcggcacggccccaaagctgcgtgcgacccctcg
gggggcgtagccttcagaggcgtggcctccaggggcgtggcagtgcgggccccgggccgc
agcgggggtcgcggcccctgcgtggtcatcgaggacgttcgggatcaggacccgagcgtc
ggagcgccggcgtcgtcgcagccgggcgggtaccgatccgcctcaccgccgaagcggcag
caggaccagcgggggggcggtgacagggccgcgtcaggattggccgcttcctctgacccc
gcccttcagtcgaccaatcgggaggcatctcctcccgccgagcggccggtggagcgcaag
tcgtacgctctcgctcgcaggactcgatcccggccagcggacctgggcagcaagcaggcc
tcggtggaggagcccgccacgcccgcccctagcggggtaggtgggaagagctggggggac
ggaggtggaggaggtggaggaggaggaggaggaggagcagcagcagcagcagcagcagca
gcagcagcagcagcagcgctggagcagctggaccaggacgtggctcgactcagtctggcc
ggacagaactggagtccgagtccaacgtcctacttcaggtctgagatgagaggcctcccc
ggcagcctgcacctccccgcctcgccaccgcagttccccaacatggaggagatgggtgtc
ggctccaatcgagccaaacgctattcgtcccaacgccagagggcggggccagagccggct
ccgcccattcacctcggagtgatggagggacactattacgagcccatgtcgtaccaggga
cccatctacgctcacggagacggccccgcccccatcccgccgcaaggcatgctggtccag
cctgagatgcacctgccccacccaggtctccatccccaccaatcgggcggcccgatctct
agccccgccctctacgggggcccgcccgtccctctgtctccggggcaaccgcagcagctg
ctgccgccgcccttctacccgccgccgggggtcatgaccttcccgtacccgaccatgtac
ccgacgccgcaggcgcaggcgcaggtgacgtacggcggcgtgacgtactacgacaccgtg
cagcagcaggcgcagcccaagccgtccccgccgcgccgcacctcgcagcccgtcaccgtg
aagccgccgccggagctgcacttcgtctcagagtga
DBGET
integrated database retrieval system