Clinocottus analis (woolly sculpin): 137803540
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Entry
137803540 CDS
T10471
Symbol
vps16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog isoform X1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04140
Autophagy - animal
cana04148
Efferocytosis
cana05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
137803540 (vps16)
04148 Efferocytosis
137803540 (vps16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
137803540 (vps16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cana04131
]
137803540 (vps16)
Membrane trafficking [BR:
cana04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
137803540 (vps16)
Hops complex
137803540 (vps16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
137803540
NCBI-ProteinID:
XP_068458163
LinkDB
All DBs
Position
Unknown
AA seq
832 aa
AA seq
DB search
MAFITANWNPLGNAFYRKSELYEMCWNLRDGLRDCLVAAAPYGGPIALLREPHRRSPSSR
PQLEIYSASGVGIASFPWKSGPVVHLGWTVSDELLCIQEDGSVLIYDLFGSFKRHFSMGQ
EVVQSQVLEAKVFHSPYGTGVAIVTGSSRFTLATNIDDLKLRRLPEVPGLQGTPSCWVVL
TQDRQTKVLLAIGPELYILDSTSCSAVCPPGLGPQAGSILHMSVSFSYKYLALFTDSGHL
WTGPSHLQDKMSEVDTQKSTPPKQMVWCRRPKSQQPSVVLMWDRLLLVAGVCNDTIQFPT
EDPCVLVGELDGVRIIGSTNQELLQEVPLVCQDIFKIASMAPGALLLEAHREYEKSSQKA
DEYLREIKEQSMLGEAVRQCVEAAGHEYDTDTQKSLMRAASFGKCFLTDFSPDAFVSTCR
ELRVLNAVRESGVGLPLTHTQFKQMTLQVLIDRLVYRQFYPLAIEMCRYLKIPDYQGVSR
VLKHWASCKVQQKDLSDEAIARTVCVKVGDSPGVSYSHIAAKAYECGRPELAIKLLDFEA
RSGEQVPLLLKMKRSQLALSKAVESGDTDLVYTVVTYLKNEMNRGDFFMTLRNQPVALSL
YRQFCKLQEQETLKDLYNQDDDHQELGNYYVSASYREKRLENRLSLLQSAVDEYNKAKNE
FSAKATEEEMRLLRFQRKLDDEKGAGLLELSLQATMEALLALGLHKQAEQLYRDFRVPDK
RYWWLKLKSLAEKEEWEELEKFSKSKKSPIGYLAFVEVCMKSNNKYEAKKYVSKVTPEQR
VKAHLAISDMEGAADAAIERKNESEMGAVLSRCSASDHLLIDRLNRAAAVKK
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcatcacggccaactggaacccgctggggaacgcgttctaccgtaagagtgag
ctgtatgagatgtgttggaacctgagggacggactcagagactgtctggtggctgcagct
ccttatgggggtccaatagctctcctcagagaacctcacagacgttctcccagttctcgt
cctcagttggagatctattctgcgtcgggagtcggcatcgccagcttcccatggaagagt
ggcccggtggtccacttgggttggacggtgagtgacgagctgttgtgtatccaggaggac
ggatcggttctgatctacgatctgttcggatccttcaagagacacttcagtatgggacag
gaagttgtccagagtcaggtgttggaagccaaagtgttccactctccgtatggcaccggc
gttgccatcgtaactggctcctcacgcttcaccttggcaaccaacattgatgacctgaag
ctccggaggttacctgaagtcccaggtctgcaggggacgccgtcctgctgggtcgtcctc
acccaggaccggcagaccaaagtcctgctggccatcggccccgagctctacatcctggac
agcacgtcctgttctgctgtgtgtcctccaggtctcggtcctcaggctggcagtatcctc
cacatgtctgtgtctttcagctataaatacctggctctcttcactgactctggacacctg
tggacaggcccctcccatcttcaggacaaaatgagtgaagtggacacacaaaagtcgaca
cctcccaaacagatggtttggtgtcgcagaccaaagagtcagcagccgtctgtagtgttg
atgtgggaccgactgctcctggtggccggagtctgtaacgacaccatccagttccccaca
gaggacccgtgtgttttggtcggtgagctggacggagttcgcatcatcggctcgaccaat
caggagctgcttcaggaagttcctctggtctgtcaggacatcttcaaaatcgcttcaatg
gctcctggagctctgctgctggaggcccaccgcgagtacgagaagtcgagtcagaaagct
gacgagtacctgagagagatcaaggagcaaagcatgctgggagaagcagttcgacagtgc
gtggaggcagcgggccacgagtacgacactgacacccagaagtccctgatgagggccgca
tcctttgggaagtgcttcctgacagacttcagtcccgatgcgtttgtgtcgacttgcaga
gaactccgggtgctcaacgccgtgagagagagcggcgtggggctgccgcttactcacacg
caattcaaacagatgactctacaggttctgatcgacaggttggtgtatcgacagttttac
cccttagcgatagaaatgtgtcgttacctgaagatcccagattaccagggagttagcaga
gtccttaaacactgggcttcatgcaaggtgcagcagaaggacctatcggacgaggccatt
gcccgaacggtgtgtgtgaaggtgggagactcacctggtgtgtcttactctcacatcgca
gcaaaagcttatgaatgtggacgccctgagctcgccatcaagctgttggactttgaggct
cgctctggagagcaggttcctctgctgttgaagatgaagaggagtcagttggctctcagt
aaagctgtggagagcggagacaccgacctagtttacacagtggtgacgtacctgaagaac
gagatgaacaggggagacttcttcatgactctgaggaaccaaccagtcgcactgagcctc
tacagacagttctgtaaactgcaggaacaagaaactctgaaggacctttataaccaggac
gatgaccaccaggaactcggcaactactacgtcagtgccagttacagagaaaagaggctg
gagaaccgtctgtctctgctgcagagcgctgtggacgaatacaacaaagccaagaatgag
ttttctgcaaaggccacagaggaagagatgcgtcttctacgtttccaacgcaaactcgat
gatgagaaaggggcggggctactggaactatctcttcaggcgaccatggaggctctgctg
gctttaggactccacaaacaagcagaacaactgtacagagacttcagagtacctgacaaa
aggtactggtggttaaagctgaagtctctggcagagaaggaggagtgggaggagttggag
aagttctcaaagagcaagaagtctccgattggctacctggcatttgttgaagtttgcatg
aagagtaacaacaagtacgaagccaagaagtacgtctccaaggtaacacctgagcagagg
gtcaaagctcacctggccatcagtgacatggagggagctgcggacgccgccatcgaaaga
aagaatgaatccgagatgggggcggtcctctccagatgctccgcctccgaccacctgttg
attgacaggttgaaccgagccgctgctgtcaaaaagtga
DBGET
integrated database retrieval system
