Clinocottus analis (woolly sculpin): 137803568
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Entry
137803568 CDS
T10471
Symbol
cftr
Name
(RefSeq) cystic fibrosis transmembrane conductance regulator
KO
K05031
cystic fibrosis transmembrane conductance regulator [EC:
5.6.1.6
]
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana02010
ABC transporters
cana04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
137803568 (cftr)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
137803568 (cftr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cana02000
]
137803568 (cftr)
Enzymes [BR:
cana01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.6 channel-conductance-controlling ATPase
137803568 (cftr)
Transporters [BR:
cana02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC7 subgroup
137803568 (cftr)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CFTR_R
ABC_membrane
ABC_tran
AAA_21
AAA_29
DUF87
AAA_16
RsgA_GTPase
T2SSE
nSTAND3
FtsK_SpoIIIE
Dynamin_N
MeaB
Zeta_toxin
NB-ARC
nSTAND1
Motif
Other DBs
NCBI-GeneID:
137803568
NCBI-ProteinID:
XP_068458221
LinkDB
All DBs
Position
Unknown
AA seq
1516 aa
AA seq
DB search
MQKSPVEDANFLSKYFFCWTTPLLRKGFQKKLELTDVYKAPSFDLADNLSERLEREWDRE
VVSAKNKPRLMRALARCFIGPFVFFGILLYLGEVSKAVQPQLLGRIIASFDPFHAPERSQ
GYYLALGLCLLFTARFLLLQPAIFGLHHLGMQIRIALFSLIYKKTLKLSSRVLDKISTGQ
LVSLMSAHLNKLDESLGLAHFIWITPLQCILCVGLIWELIEVNGFCALASLTLLGIIQAW
LSQKMGPHRATRGGMISRRLALTSEIVENIHSVKAYGWEDVMETIIKNIRQDEMTLTRKI
GSLRYFYSASYFFSAILVIVSAIVPHALSKGIILRRIFTTASYCMVLRMTLTRQLPGSIQ
MWYDTLALVQKIEEFLMKEEYRVLEYNLTTTDLELVNVSASWDEGIGELFEKIKQENKAN
GHLNGDAGLFFTNLYVTPVLKNISLYLEKGKMLAVAGSTGSGKSSLLMMILGELVPSEGK
IRHSGRISFSPQTSWIMPGTIRDNILFGLTYDEFRYTSVIKACQLEEDFDLLPEKDKTHL
LEGGVTLSGGQRARLGLARAVYKDADLYLLDAPFTHLDIVTEKEIFEKCVCKLMASKARI
VVTSKLEHLKRADRILLLHNGDCFFYGTFSELQAKRPDFSSLLLGMEAYDNVNAERRSSI
LTETLRRVSVDETAGCFRSPETIRQSFRQQPPPPPPPNIVSGSQGHPGGDGHPEKRKQSL
ILSPLAAARKFSFIGNSQPAANAPQSATIEDGARELSERRFSVVPEDDQVEEVLPRGNLY
HHGLQHLNGQRRQSVLAFITKSQGQERREQIQSSFRKKLSITPQCDLVSELDIYARRLSK
DSVYDISEDVDETDMEQCFADDRENIFETTSWSTYLRYITTNRSLVYVLIFIFLVFFVEV
AGSVIGIFLITDEIWRDGANPSSPNFIDEQQPNSSGPPTHLAVIVTPTSAYYIIYIYVAT
SESVLALGFFRGLPLVHTLLTVSKRLHEQMLSAVLRAPMALLNTMKSGRIMNRFTKDMAT
IDDMLPLVLFDLIQLTLIVTGAIFTVSIIRPYIFIAAIPLAIVFVMLRKYFLRTGQQLKL
LEAEARSPIFSHLIISLKGLWTIRAFGRQTYFETLFHKALNTHTATWFHYLSTLRWFLFR
CDMIFVLFFTAAAFIAVGTNQDKPGEVGIIVALAMLILGTFQWAVITSITVDGLMRSVDR
VFKFIDLPSEEPLPERPGSREPDLVIDNPHAERCWPNRGHMQVQGLTAKYTEAGRAVLSD
ISFSVEGGQSIGLLGRTGSGKSTVLSALLRLASTDGEISIDGVSWSSVSLHTWRKAFGVV
PQKVFILTGTFRMNLDPYGRHGDEELWRVAEEVGLKSVIEQFPDKLDFQLEDGGNVLSNG
HKQLLCLARSILSKARILLLDEPSAYLDPITLQVLRKTLKHAFSGCTVILSEHRVEPLLE
CQSFLMIEGTSIKSYDSLQKLLNETSHLKQAMSPADRLRLFPALHRLNSSKRAPPPAAKI
SSLPEEAEDEVHDTRL
NT seq
4551 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagtcaccggtggaagatgccaacttcctctccaagtatttcttctgttggacg
acgccgctgctgaggaagggcttccagaagaagttggagctgacggacgtgtacaaggct
ccttccttcgacctggcggacaacctctccgagagactcgagagagaatgggaccgagag
gtggtgtcggccaagaacaagccccggctgatgagagcgctggcccggtgcttcatcggc
cccttcgtcttcttcgggatcctcctctacctcggggaggtgtccaaggcggtgcagcct
cagctgctgggccgcatcatcgcctccttcgacccgttccacgctccggagcggagccag
ggctactacctggccctgggcctttgcctcctcttcaccgcccgcttcctgctgctgcag
cccgccatcttcggcctgcaccacctgggcatgcagatccgcatcgccctgttcagtctc
atctacaagaagaccctgaagctgtccagtcgagtcttggataagatcagcaccggtcag
ctggtcagtctgatgtcggcgcacctcaacaagctggacgagagcttgggtctggcccac
ttcatatggatcaccccgctgcagtgcatcctgtgcgtgggtctgatctgggagctgatc
gaggtgaacggcttctgcgcgctggcgtcgctgacgctgctgggcatcatccaggcctgg
ctctcgcagaagatgggccctcaccgcgcgacgcgaggagggatgatcagccgccgtctg
gcgctcacctcggagatcgtggagaacatccactctgtgaaggcgtacggctgggaggac
gtgatggagaccatcatcaagaacatcaggcaggacgagatgacgctgacgaggaagatc
ggctccctgcggtacttctacagcgcctcctacttcttctccgccatcttggtcatcgtg
tcggccatcgtgccgcacgcgctcagcaagggcatcatcctgcgccgcatcttcaccacc
gcctcctactgcatggtgctgcgcatgacgctcacccgccagctgccgggctccatccag
atgtggtacgacacgctggcgctggtccagaagatcgaggagttcctgatgaaggaggag
taccgagttctggagtacaacctgaccaccaccgacctggagctggtcaacgtctccgcg
tcctgggacgagggcatcggtgagctgtttgagaagatcaagcaggagaacaaggctaac
ggacacctgaacggggacgccggcctcttcttcaccaacctctacgtcacgcccgtcctc
aagaacatcagcctgtacctggagaagggcaagatgctggcggtggccgggtccaccggc
tccgggaaaagctccctgctcatgatgatcctcggagagctggtgccgtcggagggtaag
atccgtcacagcggtcgcatctccttctcgcctcagacctcctggatcatgccggggacg
atccgggacaacatcctgttcggcctgacgtacgacgagttccgctacacctccgtcatc
aaggcctgccagctggaggaggactttgacctgctgcccgagaaagacaagacgcacctc
ctggaaggaggcgtgaccctcagcggggggcagagggcgcggctcggcctggccagggct
gtgtataaagatgcggacctctacctgctggatgcacctttcacccacctggacatcgtg
acggagaaagagatctttgagaagtgcgtctgtaaactcatggcgtccaaggcgcgcatc
gtggtcaccagcaagttggagcacctgaagcgggcggaccggatcctcctgctgcacaac
ggggactgcttcttctacggcaccttctcggagctgcaggccaagcggcccgacttcagc
tccctcctcctgggcatggaggcctacgacaacgtcaacgcggagcgacgcagctccatc
ctcaccgagaccctccgccgggtctccgtcgacgagaccgccggctgcttccggagcccc
gagaccatccgccagtcgttccggcagcagccgccgccgccgccgcctccgaatatcgtc
tccggatcccagggccacccggggggcgacggccacccggagaaacgaaagcagtccctt
atcctgagtccgctggcggcggcccgcaagttctccttcatcgggaactcccagccggcc
gccaacgctccccagtccgcgacgatagaggacggggcgcgggagctctccgagcggagg
ttctcggtggtgcccgaggacgatcaggtggaggaggtgctccccagggggaacttgtac
caccacgggctgcagcacctcaacgggcagcggcgccagtccgtcctggcgttcatcacc
aagtctcagggccaggagcgcagggagcagatccagtcctccttcaggaaaaagctgtcc
atcacgccgcagtgcgacctggtgtccgagctggacatttacgcccgccgcctgtccaag
gacagcgtttacgacatcagcgaggacgtggacgaaacagacatggagcaatgcttcgca
gacgaccgagagaacatctttgaaactacctcgtggagcacgtacctccgctacatcacc
accaacaggagcttagtctacgtcttgattttcatcttcctcgtcttcttcgtcgaggtt
gctggttcagtcattggaattttcctcattacggacgagatctggagggacggcgccaac
ccctcgtcgccgaacttcatcgacgagcagcagccgaacagctcgggcccgccgacccac
ctggcggtcatcgtgacgccgaccagcgcctactacatcatctacatctacgtggccacg
tcggagagcgtgctggccctgggcttcttccggggtctcccgctcgtgcacacgctgctc
accgtgtccaagaggctgcacgagcagatgctcagcgccgtgctgcgagcgcccatggcg
ttgctcaacaccatgaagtctggccgcatcatgaacagattcaccaaggacatggccacc
atagacgacatgctgcctctggtgctgttcgacctcatccagctgacgttgatcgtcacg
ggcgccatcttcaccgtgtccatcatacggccttacatcttcatcgccgccatcccgttg
gccatcgtcttcgtcatgctcaggaagtactttttgcgaaccggacagcaactcaagctg
ctggaagccgaagctcgcagcccgatcttctcccacctcatcatctccctgaagggcctg
tggacgatccgggccttcggccgccagacgtacttcgagacgctcttccacaaggcgctg
aacacgcacacggccacctggttccactacctgtccacgctgcgctggttcctcttccgc
tgcgacatgatcttcgtcctgttcttcacggccgccgccttcatcgccgtcgggaccaac
caggataaaccaggggaggttggcatcatcgtggccctggctatgctcatcctggggaca
ttccaatgggccgtcatcaccagcatcactgtagacggactgatgcgctcggtggaccgg
gtgttcaagttcatcgacctgccgtcggaggagccgctgccggagcgtccgggctccaga
gagccggacctggtgatcgacaacccccacgcagagcgctgctggcccaacagaggacac
atgcaggtccagggcctcaccgccaagtacacggaggcggggcgcgccgtgctgagcgac
atctccttcagcgtggagggagggcagagcatcggcctgttggggcgcaccggctcgggg
aagagcaccgtgctctccgctctgctgcgtctggcctccaccgacggggagatctccatc
gacggcgtctcctggagctccgtgtcgctgcacacctggaggaaggccttcggcgtggtg
ccgcagaaagttttcattctgaccggaacgttccggatgaacctggacccgtacggacgg
cacggcgacgaggagctgtggagggtcgccgaggaggtgggcttgaagtcggtgatcgag
cagttcccggacaagctggacttccagctggaggacggaggcaacgtgttgagcaacggc
cacaagcagttgctgtgcctggcgcgctccatcctgagcaaagcccgcatcctgctgctg
gacgagccctccgcctacctggaccccataacgctgcaggtcctgaggaagacgctgaag
cacgcgttctccggctgcaccgtcatcctgtcggagcatcgggtggagccgctgctggag
tgccagtccttcctgatgatcgagggcacctccatcaagagctacgactccctccagaag
ctgctgaacgagacgagccacctgaagcaggccatgagcccggccgacaggctccgcctc
ttccccgcgctgcaccgcctcaactccagcaagcgggcgccgccgccggccgccaagatc
tcctcgctgccggaggaggccgaggacgaggtccacgacacgcgcctctag
DBGET
integrated database retrieval system
