Clinocottus analis (woolly sculpin): 137803645
Help
Entry
137803645 CDS
T10471
Symbol
irf7
Name
(RefSeq) interferon regulatory factor 7 isoform X1
KO
K09447
interferon regulatory factor 7
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04620
Toll-like receptor signaling pathway
cana04621
NOD-like receptor signaling pathway
cana04622
RIG-I-like receptor signaling pathway
cana04623
Cytosolic DNA-sensing pathway
cana05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
137803645 (irf7)
04621 NOD-like receptor signaling pathway
137803645 (irf7)
04622 RIG-I-like receptor signaling pathway
137803645 (irf7)
04623 Cytosolic DNA-sensing pathway
137803645 (irf7)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
137803645 (irf7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cana03000
]
137803645 (irf7)
Transcription factors [BR:
cana03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
137803645 (irf7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
137803645
NCBI-ProteinID:
XP_068458422
LinkDB
All DBs
Position
Unknown
AA seq
438 aa
AA seq
DB search
MQSLPKPQFASWLIEQVETGQYTGLRYEGQNKFRVPWKHNSRKDCNDEDSKVFRAWAVAS
GKITEFPNDKARWKTNFRCALNNLSLRFKMIMDNSKISDDPHKIYEIINTEYNYESLPTQ
DSQEDSVMTPDIYSSPVECFPSGNEHNLLNNLMALDLGCQTSDKQLWVEDYGQPKPTAPG
SYHVAAENHPLPLPAQPSYCEVNPPQLPSSPLQQPSIFDLEISIHYRKSEMLKITLNTAL
LQLHYLQEASDLNGHNICFPSTDSLLDHKQVEYTNRILNSIERGLCLEVRDTGIYAWRQD
RCHVFASTSDPSVADPDPRKLPQNTMVELLNFGKYVTELKQFRENNGVSPDYTINMCFGE
KFPDGRPLEKKLIIVKVVPLICRHFHEIAQMEGASSLHSANVSLQISHNSLYDLINSVFG
LPMDDEPARAAAPFLPQS
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagccttcccaagccccagtttgccagctggctcatcgagcaggtggagacgggc
cagtacacgggcctccgctacgagggccaaaacaagttcagagtcccctggaagcacaac
tccagaaaggactgcaacgatgaagacagtaaagtgttccgggcatgggcagtagcaagt
ggaaaaatcaccgagttccccaacgacaaggccagatggaaaaccaacttccgctgcgct
ctgaacaacctctctctgcgcttcaagatgataatggataattccaagatttcggacgac
cctcataagatctatgagattatcaacactgaatacaactatgaaagtctgccaacacaa
gactcccaggaggattctgtcatgactccagacatctacagctcccccgtagagtgcttc
ccctcaggaaacgagcataatctacttaacaatctcatggccttggatcttggttgccag
acatcagacaagcagctgtgggtagaggactatggtcagcccaaaccaactgcccctgga
agctatcacgtagcagctgagaaccacccactgcctttacccgctcagccgtcttactgt
gaggtaaatccaccacaactcccaagttcacctctgcagcagccaagtatatttgacctg
gagatttccatccactacaggaaaagtgaaatgctaaagatcacattgaacactgcgctt
ctccagctccactacctgcaggaggcctcggacctcaatggccacaatatctgctttccc
tcaacagacagtctgctggaccacaaacaggttgagtataccaaccgcatcctcaacagc
attgagaggggcctatgcctggaggtacgggacactggtatttatgcctggaggcaggac
cggtgccacgtgtttgctagcaccagtgaccccagtgtggctgacccagacccaagaaag
ctgccccagaacaccatggtggagctcctcaactttgggaagtatgtaactgaactgaag
cagtttagagagaacaacggtgtctctcccgattacaccatcaacatgtgctttggagag
aagtttcctgatggaagacctttggagaagaagctcatcatagttaaggtggtgcctttg
atctgtcgacactttcatgagattgcccagatggaaggggcttcgtctcttcacagcgcc
aacgtcagcctccagatctcacacaacagcctctatgatcttattaactctgtctttggt
ctgccgatggatgacgagccagcacgggccgctgcaccttttctacctcagtcctga
DBGET
integrated database retrieval system
