Clinocottus analis (woolly sculpin): 137803651
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Entry
137803651 CDS
T10471
Symbol
roraa
Name
(RefSeq) nuclear receptor ROR-alpha A isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
cana Clinocottus analis (woolly sculpin)
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cana03000
]
137803651 (roraa)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cana03310
]
137803651 (roraa)
Transcription factors [BR:
cana03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
137803651 (roraa)
Nuclear receptors [BR:
cana03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
137803651 (roraa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
137803651
NCBI-ProteinID:
XP_068458435
LinkDB
All DBs
Position
Unknown
AA seq
519 aa
AA seq
DB search
MESPPDPASDPGNSASEPATPVRETPVNLETLRKADHPAPVRRQTCSSTNRGISVAKKTH
TSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNAAYSCPRQKNCLIDRTSRNR
CQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQQQREHQQQPGEAEPLTP
SYGLSANGLTELHDDLSGYMDGHTPDGSKPDSAVSSFYLDIQPSPDQSGLDINGIKPEPI
CDFAPGSGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHMETCQYLREELQQMTWQAFL
QEEVESYQSKPREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVV
FVRMCRAFDSQNNTVYFDGKYAGPDVFKSLGCDDLISSVFEFGKNLCSMHLSEDEIALFS
AFVLMSADRSWLQEKVKVEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRALCSRH
TEKLTAFKAIYPDIVRAHFPPLYKELFGSDFEQSMPVDG
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggagtcccctccagatccagcgagcgacccgggcaacagcgcctcggagccggctacc
ccggtcagggaaaccccggtaaacctggagacgctccggaaagcggaccatccagccccg
gttcggaggcagacctgctcaagcaccaacagaggtatctcagtagcaaagaagacacat
acctctcaaatcgaaataattccctgcaagatctgtggagacaaatcatcaggcatccat
tacggcgtgataacatgtgaaggctgtaagggcttcttcaggaggagtcagcagagcaat
gcggcctactcctgcccccgtcagaagaactgcctgatcgaccgcaccagccgcaaccgc
tgccagcactgccggctgcagaagtgcctggcagtgggcatgtcacgagatgcggtgaag
tttggccgcatgtcgaagaagcagcgagacagcctgtacgctgaggtccagaagcaccgg
ctgcagcagcagcagcgtgaacaccaacaacagcctggagaggcggagccgctcacacct
agctatggcctctcagccaatggcctcactgagctccatgacgacctcagcggctacatg
gatggtcacacccctgacggcagcaaaccagactcggcggtcagcagcttctacctggac
atccagccatctcctgaccagtcaggcctggacatcaacggcatcaagccggagcccatc
tgcgactttgcccctggctctggcttcttcccttactgctccttcaccaacggagaaacc
tcccccaccgtgtccatggctgaactagagcacctggcccagaacatctccaagtcacac
atggagacatgtcagtacctgagggaggagctgcagcagatgacctggcaggccttcctg
caggaggaggtcgagagttaccagagcaagccccgggaagtcatgtggcagctgtgtgct
atcaaaataacagaggccattcagtatgtggtggagttcgccaagcgcatcgacggcttc
atggagctgtgtcagaacgatcagatagtgctgctgaaagcaggctctttggaagttgtg
tttgtcagaatgtgccgtgcctttgactcgcaaaacaacaccgtctattttgatggaaag
tatgccggacctgatgtgttcaagtcattaggctgtgacgacttgatcagctccgtcttc
gagtttgggaaaaacttgtgttctatgcacctgtctgaggatgagatcgccctgttctcc
gcctttgtgttgatgtcggctgatcggtcttggctccaggagaaggtgaaggtggagaag
ctccagcagaagattcaactggctctccagcacgtcctgcagaagaaccacagagaggac
ggtatacttacaaagttgatatgcaaagtgtcgacactgcgagcgctgtgcagtaggcat
acagagaagcttacagctttcaaagcaatatacccagacattgtgcgtgcccacttcccc
cccttatacaaggagctgttcggatcagactttgagcagtccatgcccgttgacgggtag
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