Clinocottus analis (woolly sculpin): 137804016 Help Entry 137804016         CDS       T10471                                  Symbol nlrc5 Name (RefSeq) protein NLRC5 isoform X1   KO K22615   NLR family CARD domain containing 5 Organism cana  Clinocottus analis (woolly sculpin) Brite KEGG Orthology (KO) [BR:cana00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04054 Pattern recognition receptors [BR:cana04054]     137804016 (nlrc5) Pattern recognition receptors [BR:cana04054]  Cytoplasmic pattern recognition receptors   NOD-like receptors    137804016 (nlrc5) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  NACHT LRR_6 NLRC4_HD2 LRR_4 Atypical_Card ABC_tran AAA_30 NOD2_WH Germane RsgA_GTPase CdhC Motif Other DBs NCBI-GeneID:  137804016 NCBI-ProteinID:  XP_068459040 LinkDB All DBs Position Unknown AA seq 1927 aa AA seqDB search MAEGVDPDAENVNSVLAQEFSELLHILSGQSPAVIIELCHLMPCDAGWNSNPASSSPSTE HIKAMLEYFRGANSADCSNFLQSMCLLCENIPMHLESRLMSVAGYETSVCEHSSASPPDG KSSSLPSEQLIKRPRIDYWIQYIAAVMHLLQRRWERLSERLVRGVQLENVWVSLRTANRV RDRPDQTPGSADKGGKTPESDGDYGSMDSRVTLETFLQECTGKVTVLLGPAGSGKSLLMS CLGQQWAHELGPIPSSYLFVLLEFRQLNVLTHSLSLSELLFRHYVPLKEGDHEKEAIVDY LLSNPEQSCWVLDGYDEFHSKLAKQEVHRELLDPEKPLPVADLISGLLNRQLLPGCTVLV TCRVRDVLDLEGKADKVGQLLGWECHEIKEYVDSFFGEKGHSANRALGVQAAEVLLSNRH LLGMSSLPALCNICCIYLEHLLLEHTDQGKMWIAEERGRETRRTAGGKEEKGVQQCPGAR RGEEGSRGGRKKQGGGSEDMMTDGTNSRAQLPLTHAQIPSTLTQVYLSVLDTFLNRDPDP RGSNDELNTMRLPQGILTQHRSELCELSQLAWTGFEDSKILFMEEDISQEALEFSIRTGL FLQVELRHEDGMLVNSYCFTHLTLQEFLAALRIMTSADVSDTQLKKRFSLRTRWTTKSDQ RTVFTDSLHLFVCGLASPYCTPALVQLARAPGGTGGQSWVQKRQNLVLKLLKNLCHSNTL TGPKILELCHCVQESQNHQIAQQVLGARPTLELRNIRLLPNDIDALAFVVNSVGDNGIGL DFGACTMESECLDVLPRCQYIQYLGFRRRKYDDKFAEKLSSILPKLTSLRKLEFCGTSLT ATGAASLASALPSCPDVTEINLSDNNLKDDGIKHIADIFTKQPKLVLVKLGRNNSSLGAV DYLIGKMSSFSNIQEVHADGLKELTVTFSQNSDLISHKTKSEPTICLLNQKWSKPDMQKL AKSLACCPALSVLDISGGRLDVETLRMLIKFLPKVNVTQKIIANDSCLTVEGLTIVTALL ADCPAVVELRIRLQSSVQVSIVFSGGREQTNEVSKLLCLSCCGLLPTHLERVWRSLGTAP DLTSLDLSSNQLGSSGLRKLLDFLPHLRSIQEIDASNNGIGKERVGMLAGALCSHNNLTH IHISDGDGEQVILKFCHDKRDDKQQKKMFRINNSSLPPSIMTTLCKRLVQCRSHLELDLS HSLLSDKAIEDLLKVLPKMKSLQRLNVSHSFESTTAALMLLRCLTVSERVTAVELRPQTA SFIQFDSVKAEQASCRLTHCSLKGDNVQRLLEILLQGPQLSVLDLSSNQLEDEGVKHVVD CLQKLKITRYVNLSNNGLTQEGMMDVANTLCTYNNVSGVEISLEAEERCLVWFTQNNCVK SLSVRDSSLERGHLVRLAEIVSISPGLTTLEFKNNLLQLDWIEDFVKLLNSYQRDFSISI EERWIRSEEAVTLLCRCLHVSSNIQTIRVHNTTLHLFLKKSTELQNQKPFTSSDGCADLT PRIATEKICLWNCAVQGYHLASMKSIISRCPLLTDLDFSHNSLGVEGAEFLCSVLPLLPN ITSLSICSKETSVTVVEKLSEALLQAAAIQCLTLSGHVISDTGAQILSRTLSRLRSLNLS HCQWSASGGLQLIKALGECVCLEGLCLDCLWLNEESRTCLAKVLRKINSIRSLKLNKIST EMGPSQAIGVLDLLAATEGLTRAQEIELEGWRMADRGIEELTRLLPAWKELRKIRLSKNL ISDQLGVVLLEALNSCTHLEELHLPSNSLGNLTAARMALVLPSLTHITVLDISENRIGYE GSVSLSKAIMCMKNLTKINLTSVGTSELCPVAASLAHCPVLQDVGLGWNNCGDKVAVELA RVMPLCQKLMRIDLESNAVSVSGAEALAGALESCPALQLIRLWRNNVSSTEACRLSLRER RLNFSST NT seq 5784 nt NT seq  +upstreamnt  +downstreamnt atggctgagggggttgatcccgatgccgaaaatgtgaactctgtcttggctcaggagttc tcagaactgctccacatccttagcggtcagtcacccgcagtcatcatagaattgtgccat ttgatgccctgtgatgctggttggaacagcaatccggcctccagtagcccctcgacagag cacatcaaagccatgttggagtacttcaggggggccaactctgcagattgcagcaacttc cttcagagcatgtgtctattgtgcgagaacatccccatgcacctggagtccaggctcatg tcagtggctggatatgaaactagtgtttgtgaacattccagtgccagtccacctgatgga aagtcgtcatcgttgccttcagagcagctcatcaagcgcccacggattgattactggatc cagtacattgctgcagtcatgcatttactgcaaaggaggtgggagcggctcagtgagcgc ctggtgaggggggtgcagctggagaatgtgtgggtcagcctaagaacggcgaaccgagtc agagacagacctgatcaaactcctggatcagcggacaaagggggcaaaacaccagagtct gatggggactatgggtctatggattccagagtgacattggagaccttcctccaggaatgt acagggaaggtgacagtccttcttggcccagctggatcagggaaatctctgctgatgtct tgcttaggacaacagtgggcacatgaactaggcccgattccttcatcttacctgtttgtc ctgctggagtttcgtcagctcaacgtgctgactcactctctctccctgtctgagctgcta ttcagacactatgtccccttaaaagagggtgaccatgaaaaggaagccattgtggattac ctcctttccaatccagagcaaagctgttgggtgctggatggctatgacgagtttcacagc aaacttgccaaacaagaagtgcacagagagctactggacccagaaaagcctttgcctgtt gcagacctcatatcagggctgttaaatcgtcagcttctcccaggatgtactgtgctggtc acttgtcgtgttcgcgatgtcctcgatttggaaggcaaagcagataaagttgggcagctg ctgggttgggaatgccatgaaatcaaggagtatgtggacagcttttttggcgaaaaaggt cactcagccaaccgggctcttggggtgcaggcagcagaagtccttctttccaatcgacac ctgctcggtatgtcctccctccctgccctctgcaacatctgctgcatctatctggagcat ttactgctggagcatacagatcaaggaaagatgtggatagctgaagaaagaggaagagag acaaggagaacagcgggtggaaaagaagaaaaaggagtacagcagtgtccaggagcaaga agaggagaagagggcagtaggggagggaggaaaaagcaaggcggagggagtgaagacatg atgacagatggaacaaactctagagcccagctaccgctcacacacgcccagataccctcc accctcacccaagtctacctcagtgttcttgatacgtttctgaaccgtgaccctgatcca agaggaagcaatgacgagctgaataccatgagacttccgcagggtattctgactcagcat cgatctgagttgtgcgaactcagtcagctggcctggactggcttcgaggacagcaagatc ctcttcatggaagaagacatttctcaggaggcgttggagttttcaatcaggacggggctc tttttacaggtggagctcagacatgaggatgggatgcttgtcaactcctactgcttcact catctgactttacaggagtttttggctgcactcagaatcatgacgagtgccgatgtgagt gacacacagctcaagaagagattcagtctgagaactcgctggacaaccaagtcagaccag aggacagtctttactgactccctgcacctgtttgtatgtggcctggcctctccatactgc actccagccttagttcaattagccagggcccctggtggaacaggaggccaaagttgggtc caaaaacgacaaaaccttgttctgaaactgctaaaaaacctttgtcacagcaacaccctg actggaccaaagatattggagctttgccactgtgttcaggagagccagaaccaccaaata gctcagcaggttctgggtgcgagacccaccttggagctgcgcaacatccggcttctacct aatgatattgatgctctggcgttcgtagttaactcggtcggtgataatggcattggattg gactttggagcatgcacaatggagtcggagtgtttagatgtcctgccaaggtgtcagtac attcaatacctcgggtttcgcagacgcaagtacgacgacaagttcgctgagaagttgtcc tccattttgccaaaactcacaagcctgaggaaactagagttctgtggtaccagtctgacg gccaccggagcggctagtttggcctctgctctaccgagctgtccagacgtcactgaaatc aacctgagtgacaacaatctgaaagacgatgggatcaaacacatagctgatatttttacc aaacagccaaagctggttttggtgaagttgggtcgaaacaacagctctctgggagcagtg gactatctcattgggaaaatgtcttcgttctcgaacatccaggaggttcatgcagacgga ttgaaggaattgacagtcactttctctcaaaactcagatttgatcagccataaaactaag tctgaaccaacaatctgcttgttgaaccagaaatggagcaagccggatatgcaaaaactt gcaaagtcattggcatgttgccctgccttgtctgtcctggatatttctggaggtcgcttg gatgttgaaactctgaggatgctgattaagtttttgccgaaggtcaacgttacccaaaaa atcattgcgaatgacagctgcttgacagtggagggtttgacgattgtgactgctctgctg gccgattgtcctgctgtggtggagcttcgtatcagactacagagttctgttcaggtgtcc atagtgttttctggagggagagaacaaactaatgaagtgtctaaactgctctgcctcagc tgctgtggtctgctgccgactcatctggagagagtgtggaggagtttgggaactgctcct gatctcacttctctggatctgtccagtaaccaattaggcagcagcggtctgaggaaactg ttggacttccttccccatctaagaagcatccaggaaatagatgccagtaacaatgggatt ggcaaggaaagagtgggcatgctggctggtgctttgtgctcccataacaacttaacacac atccacatcagtgatggagacggagagcaggtgatcctgaagttctgccatgacaaaagg gatgacaaacagcagaaaaagatgttcaggataaacaacagcagtctcccaccatccatt atgaccacactctgtaaacgattggtccagtgtcgctcccatttggagttagatttgtct cacagcttattgtcggacaaggccatcgaggatctgctgaaggtcctgcccaagatgaag tcactgcagagactcaatgtcagccacagcttcgaatccacaactgcagcgctgatgctg ctcagatgtttgactgtcagtgagcgagtcaccgcagtggagctcaggcctcagactgcg tccttcatccagtttgacagtgtgaaagcagaacaagccagctgcaggttaacgcattgt agcctgaaaggagacaacgtgcagagactgctggagatcctcctgcagggtcctcaactg tcggtcctggatttatcaagtaaccaactggaagatgagggggtgaagcatgttgtggat tgtctacaaaagcttaaaatcacacgctatgtgaatttgagcaacaatggcctgacgcag gaggggatgatggatgtggccaacacactgtgcacctataacaacgtctcaggtgtagaa atcagtttggaagcagaggagagatgtctcgtctggttcacgcaaaacaattgtgtaaaa tcgctgagtgtcagagacagcagtttggaacgtggccatctggtcagactagcagagatt gtgtccatcagtcctggtctaacaacactagagttcaagaacaatttgctacagttggat tggattgaagactttgtgaagctgttgaacagctaccagagagacttcagcatcagtatt gaggaacgttggatcagatctgaggaagctgtgactttgttgtgtcgctgtctgcatgtc agcagcaacatacaaactatcagggttcacaacaccacgctacatctgtttttgaagaag tccactgaacttcagaatcagaaaccgtttacttccagcgacggctgtgcagatctgact ccacgaatagccacagagaaaatctgcctctggaactgtgcagtacaggggtaccacctt gcatccatgaagagcatcatctcgagatgtcctttactcacagacctggatttttcccac aacagcctgggcgtggagggagctgagtttctctgttctgtcctgcccttactgccaaat atcacttctctcagtatttgttccaaagagacttctgtgactgtggttgagaagctgtca gaggccctgctgcaggctgcagccatccagtgcttaactctgtcaggtcatgtgattagt gacacaggagcccagattctgagcagaacgttgtctcggctaagatcactcaatctgtct cactgccagtggtcagcgtctggagggctgcagctcatcaaagcactgggagagtgtgtc tgtctggagggcctttgtctggactgcttgtggctgaatgaggagagcagaacgtgcctg gcaaaagtactaaggaaaatcaactctatacgcagtctcaagctaaataagatttcaaca gaaatgggaccatcacaagcaatcggtgtgctagatctcctcgctgctacggagggactc acgcgagcgcaggagatagagttggagggctggaggatggctgatagaggaatagaagag ctgaccagactccttcctgcctggaaagagctcagaaagatcaggctatcaaagaacctt atcagcgaccagttgggagtcgtgctcctggaggctctgaacagctgtactcatctggaa gagctccatctgcctagcaacagcctcgggaatctcactgctgccaggatggcccttgtt ctaccgtcactgacacacatcactgtgctggatatttcagagaacaggattggatatgaa ggatcagtgagcttgtccaaagcaataatgtgcatgaagaacctcaccaagatcaatctg acctctgtggggacctcagagctgtgtcctgttgctgcgagtctggcccactgtcccgtc ctacaggatgtgggcctaggatggaataattgtggcgataaagtggcagtggagctggcc agagttatgcctctatgtcagaagctgatgagaatagatctggagtcaaacgctgtgagt gtttccggagcggaggccctggctggagccttagagtcgtgtcctgctctgcagctcatc aggctgtggaggaacaacgtctcctccactgaggcctgcaggctcagtctgagggagagg aggctgaacttctcatctacctaa

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