Clinocottus analis (woolly sculpin): 137804055
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Entry
137804055 CDS
T10471
Symbol
itga11b
Name
(RefSeq) integrin alpha-11
KO
K06587
integrin alpha 11
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04510
Focal adhesion
cana04512
ECM-receptor interaction
cana04810
Regulation of actin cytoskeleton
cana04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137804055 (itga11b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
137804055 (itga11b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
137804055 (itga11b)
04810 Regulation of actin cytoskeleton
137804055 (itga11b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cana04515
]
137804055 (itga11b)
Cell adhesion molecules [BR:
cana04515
]
Integrins
Integrin alpha subunits
137804055 (itga11b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
FG-GAP
VWA_2
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP_3
FG-GAP_2
LYRIC
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
137804055
NCBI-ProteinID:
XP_068459108
LinkDB
All DBs
Position
Unknown
AA seq
1210 aa
AA seq
DB search
MDHHRLPLLLWTCCFLPDLQLCFNFDTKNFKIFSGSKESQFGYTVQQHEVGGRQWLLVGA
PFESTGKQQTGDVFRCPLDNRNSANCTKLNLGRLSLDNVSERKDRMRLGMTLTSNPRDGS
FVTCGPLWSHECGSSLYSTGVCSRVSRSFRLGLSMAPALQRCETLMDIVIVVDGSNSIYP
WYEVQDFLITILQKFYIGPGQTQVGVVQYGSTVVHEFGLGEYQTVEEVVEAARAIDQRGG
EETRTALGINVARSEAFRRGGRPGAQKVMIVITDGESHDSPQLVQAVADSERDNVTMYAI
AVLGYYNRRGINPEAFLKEIKFIASDPDEKHFFNVSDESALKDIVDALGERIFSLEGTSS
QGRGFGLQMAQAGFSSHLVKDGVLLGAVGAYDWTGAVLKETKHGKVVPPKSSYQDEFPDE
LKNHAAYLGYSVGSLTSSRGSQLYVAGAPRFNHTGKVIVFSLKNSGNLTILQALLGEQIG
SYFGSELLSMDIDDDGRTDVLVVAAPMFYSRGWERGKVYVYSVTPQTSFVLQGALEVSDC
SQNSRLGSALAQIPDMNGDGFRELVIGAPLEDDHQGAVYVFYGQDKTIQHQYRQRLSAAG
FSAGLQYFGQSLHGVLDVNGDGLVDLAVGALGAAVIIWSRGVVRVHAELVFEPEKVNVFK
KDCRRGGKEVTCMSVNVCLSLEARTKTKTRTKIRTRTRTDVAVWFNLVLDERRFPPRAVL
DEPDRQQPGSVFLQVGGRSCRRLGFSIQETTDYGRPVAVLLEAGLRSPDEGPVLDPDWPS
VLRAELPFWNGCEQEDTCVPDLVLSSHTDLMDVQQFCSSRAAWSLCSLRGAPQGSERVVE
AGRRRMVVFARLENRGENAYGAAIHISASSNLLFSSLIVKDQSDIQIECFPENRLANQRS
CNISAPFMKSSSQLSFRVEFEFSRSVFLDHVRVSMATDSEGEDSYPDDNINDIFLPLKYQ
ADLLFTRDPNPPRFEISSSSSSSSSSSSSSSSRDQPDSSSPAFNLTYFIQNLGIFPVQDV
LLRADIWAVTRRGNQLVSITDYSIEPVTGSRCTLPSPRTTNQVTAEDLSHLAQLNHSNSV
SMAVQCRVNLPASGELKVTLRGRLLLPALLAVSFRSLELLTAASIQLEASSPMFLQEARP
VRQVLLELRKDEDYVFPVWIILGSTLGGLLLLALLVLALWKLGFFNRRRRRDEEEEEEEP
VANGKAAEEL
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atggatcatcatcgtcttcctctgctgctctggacctgctgctttctgccagatcttcag
ctctgcttcaacttcgataccaagaacttcaagatcttctccggttctaaagaaagccag
tttggatacacagtccagcagcatgaggtgggaggacgccagtggctgctggttggagca
cccttcgagtcaaccgggaagcagcagactggtgatgtgttcaggtgccctctggacaac
agaaactctgcaaactgcaccaaactgaacctggggagactctctctggacaacgtgtct
gagaggaaggaccggatgaggctcggcatgacgctgacctctaacccccgggacggcagc
tttgtgacctgcggccctctctggtcccacgagtgtggaagctcgctctacagcaccgga
gtctgttccagggtcagccggagcttcaggctcggcctcagcatggcccccgccctgcag
aggtgtgagacgttgatggacatcgtgatcgttgtggacggttctaactccatctacccg
tggtacgaggtgcaggacttcctcatcaccatcctgcagaagttctacatcggcccgggt
cagacgcaggtgggcgtggtccagtacggctccacggtggtccacgagttcggcctgggc
gagtaccagacggtggaggaggtggtggaggccgccagggccatcgaccagcggggcggc
gaggagacgaggacggcgctgggcatcaacgtggcgcggtcggaggcgttcaggcgcggc
gggcgacccggcgctcagaaggtgatgatcgtgattacggacggagaatctcacgacagc
ccacagctggtgcaggccgtcgccgacagcgagcgagacaacgtcaccatgtacgccatc
gcggttctgggttattacaaccgcagaggaatcaaccccgaagcctttctgaaggaaatc
aagttcatcgccagcgacccggatgagaagcacttcttcaacgtgtcggacgagtcggcg
ctgaaggacatcgtggacgcgctgggagaaaggatcttctctctggaaggaaccagcagt
cagggccgagggttcggtttgcagatggctcaggcgggtttctcctctcatctagtcaaa
gacggcgttctgctcggggcggtcggcgcctacgactggaccggcgccgtgctcaaagag
accaaacacgggaaagtggttccgcccaagtcgtcgtatcaggacgagtttccagacgag
ctgaagaaccatgcggcgtacctggggtactcggtgggttcgctcacttcgtctcgcggc
tctcagctctacgtggccggagcgccgaggttcaaccacaccgggaaggtcatcgtcttc
agcctgaagaactccgggaacctgaccatcctgcaggcgctgctgggggagcagatcggc
tcatatttcggcagtgagttgttatcgatggacatagacgacgacggacgaacagacgtg
ctggtggtggcggcgcccatgttctacagccggggctgggagagagggaaggtctacgtc
tactcggttactccacagacatcgttcgtcctgcagggggcgctggaggtctctgactgc
tctcagaactcccggctgggttcggcgttggctcagatacccgacatgaacggggacggg
ttcagggagctggtgattggggcgccgctggaggatgaccaccagggggcggtctacgtc
ttttacggccaggacaaaaccatccaacaccagtacagacagcgtctgtctgcagccggg
ttctctgcaggtctgcagtatttcggtcaaagtcttcacggcgttctggatgtcaatgga
gacgggctcgtcgacctggctgtgggagcactgggagctgctgtcatcatctggtctcgt
ggcgtggtgcgggttcacgccgagctggtctttgaacccgagaaggtcaacgtcttcaaa
aaggactgtcgtcgaggtgggaaggaggtcacctgcatgtccgtgaacgtctgcctgagt
ctggaggccaggaccaagaccaagaccaggaccaagatcaggaccaggaccaggactgat
gttgcggtttggttcaatctggtgctggacgagaggcgttttcctcctcgagctgttctg
gacgaaccggaccggcagcagcccgggagcgtgttcctgcaggtcggagggcggagctgc
cgacgcctcggcttctccatccaggagacgaccgattacgggcgtcccgtggcggttctc
ctggaggcggggctgaggagtccagacgaggggccggtgctggacccggactggccgagt
gtgctgagggccgagcttcccttctggaacggctgtgagcaggaagacacctgcgttccc
gacctcgtcctctccagtcacactgacctcatggatgttcagcagttctgcagctcgcgg
gccgcatggtcgctctgcagcctccggggggcgccgcagggctcggagcgcgtggtggag
gccggtcggaggaggatggtggtgtttgctcgactggagaatcggggagagaacgcttat
ggagctgccatccacatctccgcctcctccaacctcctcttctccagcctcatagtcaag
gaccaatcagacattcagattgagtgcttccctgagaacagactggccaatcagaggagc
tgtaacatcagcgctccgttcatgaagtcctcgtctcagctttccttccgcgtggagttt
gagttcagccgctccgtcttcttggatcacgtccgggtctccatggcgaccgacagtgag
ggagaggatagttacccagacgacaacatcaatgacatcttcctccctctgaagtaccaa
gctgacctcctcttcaccagagacccaaaccctcctcgtttcgaaatcagctcctcttcc
tcctcctcctcctcctcttcctcctcctcttcctcaagagatcaaccagacagcagctct
cccgccttcaacctcacgtattttatccagaacctgggcatcttcccggtgcaggacgtc
ctgctcagggctgatatctgggcggtgacccggcgggggaaccagctggtcagcatcacc
gactacagcatcgagccggtcaccgggtctcgctgcacgctgccgtcgcccagaacaacc
aatcaggtgacagcggaggacctgtctcacctggctcagctgaaccatagtaacagcgtc
agcatggcggtccagtgcagagtgaacctgccggcctctggagagctgaaggtgacactg
agaggacgcctgctgctcccggctctgctcgctgtgagcttcaggtccttggagttactg
acggctgcctccatccagctggaagcctccagtcccatgttcctgcaggaggcccgaccc
gtcagacaggtgcttctggagctcaggaaggacgaggactacgtgttccccgtgtggatc
atactgggcagcacactgggaggcctgctgctgctggccttactggtgctggccctgtgg
aagctcggcttcttcaaccgccggaggaggcgggatgaagaggaggaagaggaggagccg
gtagccaatgggaaggcagcagaggagctgtaa
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integrated database retrieval system
