Clinocottus analis (woolly sculpin): 137804109 Help Entry 137804109         CDS       T10471                                  Symbol sf3b3 Name (RefSeq) splicing factor 3B subunit 3   KO K12830   splicing factor 3B subunit 3 Organism cana  Clinocottus analis (woolly sculpin) Pathway cana03040   Spliceosome Brite KEGG Orthology (KO) [BR:cana00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     137804109 (sf3b3)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:cana03021]     137804109 (sf3b3)    03041 Spliceosome [BR:cana03041]     137804109 (sf3b3)    03036 Chromosome and associated proteins [BR:cana03036]     137804109 (sf3b3) Transcription machinery [BR:cana03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      137804109 (sf3b3) Spliceosome [BR:cana03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     137804109 (sf3b3)  Complex B     137804109 (sf3b3)  Complex C    U2 SnRNP specific factors     137804109 (sf3b3) Chromosome and associated proteins [BR:cana03036]  Eukaryotic type   Histone modification proteins    HAT complexes     STAGA complex      137804109 (sf3b3)     TFTC complex      137804109 (sf3b3) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_RSE1_1st Beta-prop_RSE1_2nd CPSF_A Motif Other DBs NCBI-GeneID:  137804109 NCBI-ProteinID:  XP_068459231 LinkDB All DBs Position Unknown AA seq 1217 aa AA seqDB search MFLYNITLQRATGITHAIHGNFSGTKMQEIVVSRGKILELLRPDANTGKVHTLLTVEVFG IVRSLMAFRLTGGTKDYIVVGSDSGRIVILEYHPSKNMFEKIHQETFGKSGCRRIVPGQF LAVDPKGRAVMIGAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEALEEHGNFLITVPG GADGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF FLAQTEQGDIFKVTLETDEEMVTEIRLKYFDTIPVATAMCVLKTGFLFVCSEFGNHYLYQ IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQENLSPIMSCQIADLANEDT PQLYVACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRKHVEDEFDAYIIVSFVN ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRVNEWKTPG KKTIVRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ RSRFLAVGLVDNTVRIISLDPLDCLQPLSMQALPAQPESLCIVEMGGVEKQDELGEKGTI GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW LSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP LQYTPRKFVIHPETNNLILIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA AFLNENLPEAIFGAPKAGAGQWASLVRLFNPIQGVTLDQVQLEQNEAAFSVAVCRFPNTG DDWYVLVGVARDMILNPRSVGGGFIYTYRLISGGEKLEFVHKTPVEDVPLAIAPFQGRVL VGVGKLLRIYDLGKKKLLRKCENKHVPNLVTGIHTIGQRVIVTDVQESLFWVRYRRHENQ LIIFADDTYPRWVTTACLLDYDTMACADKFGNISIVRLPPNTSDDVDEDPTGNKALWDRG LLNGASQKAEVIVNYHVGETVLSLQKTTLIPGGSESMVYTTLSGGIGILVPFTSHEDHDF FQHLEMHMRSEFPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMDPHKQKSVAEELDRT PPEVSKKLEDIRTRYAF NT seq 3654 nt NT seq  +upstreamnt  +downstreamnt atgtttttgtacaacatcactctccagcgtgccacgggcatcacgcatgccatccatgga aacttctcaggaaccaaaatgcaggagatcgttgtttccaggggaaagattttggagtta ttgcggccagatgccaacacagggaaggtacacactctgcttacagtggaggtgtttggt atcgttcggtccctgatggccttcagactcacaggaggaaccaaagactacattgttgtt ggaagcgacagtggtcgaattgtcatcttggaatatcatccgtcaaaaaacatgttcgag aagatccaccaggaaacgtttgggaagagcggctgccggcgcatcgtccccggacagttc ctggctgtcgacccaaaaggccgagctgttatgataggagcaatagagaagcagaagctg gtttatattctgaacagggatgcagctgccaggctgaccatctcctctcctctggaagca cacaaggcaaatacactggtctaccatgtagtcggagtcgatgtcggctttgaaaatccc atgtttgcctgcctcgagatggattatgaggaagctgacaatgacccgacgggtgaagcg gccgctaacacgcaacagacgctcaccttttacgagctggaccttggcttaaatcacgtg gtccgcaagtacagcgaggctctggaagagcacgggaattttctcatcactgttcccggt ggtgctgatgggcccagtggagttttgatctgctctgaaaactacatcacttataagaat tttggagaccagccagacattcgctgtcccatcccacgacgcaggaatgacctggatgac cccgagcgtggcatgatatttgtctgctcagccacccacaagaccaagtccatgttcttc ttcctagctcaaactgagcagggagatatctttaaggttaccctggagacggatgaagaa atggtcacagaaatccggctgaaatactttgacacaatccctgtagcaacagccatgtgt gtcctgaagactggcttcttgtttgtgtgttcagaatttggaaaccattacctttaccag atcgctcacttgggtgatgatgatgaggagcctgagttctcctctgcaatgccgttggaa gagggagacacattcttcttccagcctcgccccctcaagaaccttgtgctggtggacgag caggagaacctatcacccatcatgtcctgccagattgctgatttggccaatgaagataca ccacagttgtacgttgcctgtggtcgaggaccccggtctactctgagggtccttagacat ggactggaggtatcagagatggctgtgtctgagctgcccggtaaccctaacgcagtgtgg acggtacgcaaacatgtggaagatgagtttgatgcctacatcattgtgtctttcgtgaac gccactctggtcctgtccatcggagagactgtagaggaagtgacagattcgggatttctt ggaacaacgcctactctctcctgctcactgctcggtgaagacgcgctggtgcaggtctac ccagatggaattcgccacatccgagcagacaagcgtgtgaatgagtggaagactcctggt aaaaaaaccattgtccgctgcgctgtgaaccagcggcaggttgttatcgcactcaccgga ggggagctggtctactttgagatggacccgtccggtcagctgaatgagtacactgagcgg aaggagatgtctgcagatgtggtttgtatgagcctcgcaaacgttccacctggtgagcag cgttcgcgattcctggccgtaggactggttgacaacactgtccgaatcatctctctggac cctttggactgcctacagccgttgagcatgcaggccctaccggcccagccagagagtctg tgtattgttgagatgggaggggtcgagaaacaggatgaacttggagaaaagggaaccatt ggcttcctctacctcaacataggacttcagaacggtgtgctgctgaggactgtgctggac ccagtgaccggtgacttgtcagataccagaacacgctacctggggtcacgacctgtcaaa ctcttcagagttcggatgcagggacaagaagctgtgctggcaatgtctagtcgctcctgg cttagctactcgtaccagtctcgctttcacctgacccctctgtcatatgagactctggag tacgcctctggctttgcctccgagcaatgccctgaaggcatagtggccatttccaccaac acactgagaatcttggctttggagaaattaggagcagtcttcaaccaggtggcctttcct ctgcagtacactcccagaaaatttgtaatccacccggagacaaacaacctaattttgatt gagacggaccacaatgcctacactgaggcaaccaaagcccagaggaagcaacaaatggca gaggagatggtggaggctgctggtgaagatgaaagggaactggctgctgagatggctgcc gccttcctcaacgagaatctcccagaagccatttttggggcacccaaagctggagccgga cagtgggcctcacttgtgcgcctctttaaccccatacagggtgtaacgctggaccaggtg cagttggaacagaatgaagctgcgttcagcgttgctgtgtgtcgtttccccaacacagga gatgattggtacgttctggtgggcgttgccagagacatgattctcaaccccagatcagtg ggcggtggctttatctacacctatcggctcattagtggaggcgagaaactggagtttgtg cacaaaaccccggtagaggacgtgcctttggccattgctccattccagggacgagtcctg gttggagttggaaaactgctgagaatctacgacctgggcaaaaagaagctgctccgcaag tgtgaaaacaagcacgttcccaacctggtgactggcatccacaccatcggccagcgggtg atcgtgactgacgttcaggagagcttgttctgggttcgttacagacgccacgagaaccag ctcatcattttcgctgacgacacgtatccccgttgggtgaccacggcctgtctgctcgac tacgacaccatggcctgtgctgacaagtttgggaacatcagcattgttcgtctacccccc aacaccagcgacgatgtggatgaagaccccacaggaaacaaggctttatgggacagaggc ctccttaatggagcatcacagaaggctgaggtgatcgtgaactaccatgttggtgagacg gtgttatccctccagaaaaccacgctaatccctggaggttcagagtccatggtctacacc actttgtctggaggcatcggcattctggtccccttcacctcacatgaggaccatgacttc ttccaacatttagagatgcacatgcgctctgagtttcctccactgtgcggcagagaccat ctcagctttagatcctactacttcccagtcaagaatgtgattgacggagatctatgtgag cagttcaacagtatggaccctcataagcagaaaagtgtggcagaagagcttgacagaacg ccgcctgaggtttctaagaagctggaggacattcgcactcgctacgccttctaa

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