Clinocottus analis (woolly sculpin): 137804130
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Entry
137804130 CDS
T10471
Symbol
rfwd3
Name
(RefSeq) E3 ubiquitin-protein ligase rfwd3.S
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
cana Clinocottus analis (woolly sculpin)
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cana04121
]
137804130 (rfwd3)
Enzymes [BR:
cana01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
137804130 (rfwd3)
Ubiquitin system [BR:
cana04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
137804130 (rfwd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
Beta-prop_WDR5
Beta-prop_THOC3
zf-RING_2
WD40_CDC20-Fz
zf-RING_UBOX
zf-C3HC4
EIF3I
WDR55
Beta-prop_WDR3_1st
zf-rbx1
WD40_Prp19
Beta-prop_EML_2
Rtf2
zf-RING_5
zf-C3HC4_2
zf-ANAPC11
Beta-prop_WDR3_2nd
zf-C3HC4_3
zf-C3HC4_4
Beta-prop_IFT122_1st
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
zf-RING_11
zf-RING_Vps41
Beta-prop_RIG_2nd
WD40_2
CFAP43_N
NSRP1_N
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EIPR1
zf-UDP
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
137804130
NCBI-ProteinID:
XP_068459270
LinkDB
All DBs
Position
Unknown
AA seq
730 aa
AA seq
DB search
MEAMEVDFPGVLLGGGGRRRSSRSSRQRAINAAADLAGSDAAAPPHVISDSGSSTEVDED
EDDEGGRSASRAPPRLPATWAFSQRAVGGSAAPSAAQGARIRRRLRQGLRVHYPSQTAAP
SRGFPDFLLRAPAASAAEPESGSTTEVSDSDDDEDEEGGREEGPPAAPGPASQTVAAPAS
PHLGPRPQDAASTNSGSAAEDERTAAADQTVQPAASASVQPAASEEGEGDICSICFEAWT
TAGEHRLSALRCGHLFGFTCIQRWVKAQGPSAKCPQCNKKAKRSDIVLLYAPKLRALDNS
EQEALKKSLEQEQSLRRKAELESAQFKLKLQVVTNKYGQAQQELQELRALMAHAGRSSLS
SSSSSSSSSSASGSLLLLSSQRPAGSRAAQYGFSKALLVSQAGGSRVLSYCETLSCLLAS
QPSPHATLLPGCGVKKVTVVNMKASQYVPIHSKQIRGLSFNRQNDSLLLSAALDNTIKLT
SLLTNTVVQTYNTGKPVWSCCWCLDNSNYVYAGLSNGSVLVYDTRDTSTHVQELQPLRSR
CPVASLCYVPRAASSSFPCGGLIAGSLEGGCFWEQLNETTYQPHALPLEAAGCTDIQVEP
ESRHCLVTYRPGRSHPALRCVLMALTRAPQQDSAQQPGCSCSPVQTFSAGSSCKLLTKNA
VFRRPDGGGALVCAGDEASNSTMVWDAASGALLQKLPADLPVLDISPFSQNGEHFLASLT
EKMLKLYRWE
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggaggccatggaggtggacttcccaggggtgctgctgggaggaggaggaagaagaaga
agcagcagaagcagcagacagcgtgcgatcaacgccgcggcggacttggcaggatcggac
gccgccgcgccgccgcacgtcatctcggactccggcagcagcaccgaggttgacgaggac
gaggacgacgaaggggggcggtcggcgtcgcgcgcgccgcccagacttcctgccacttgg
gccttcagtcaaagagcggtgggcgggtccgccgcgccgtcggccgctcagggggcgcgc
atacggaggaggctcaggcagggcctcagggttcactaccccagccagacggcggcgccc
tccagaggcttccctgacttcctgctgcgggcgccggccgccagcgcggccgagcccgag
tccggcagcaccaccgaggtcagcgattctgacgacgacgaggatgaggaaggtggccgc
gaagaaggcccgcccgccgccccggggcccgccagccagacggtggcggcgcccgccagc
cctcacctcggcccgcggccgcaggacgccgcctcgaccaactccggctcggctgcagag
gacgagaggacggcggccgcagatcagaccgtccagccggcggcgtcggcgtccgtgcag
ccggcggcgtcggaggagggcgaaggcgacatctgctccatctgcttcgaggcgtggacg
acggcgggcgagcaccggctgtccgctctgcgctgcggccacctcttcggcttcacctgc
atccagcgctgggtgaaggcgcagggcccatccgccaaatgcccgcagtgcaacaagaag
gcgaagcgctccgacatcgtgctgctctacgcgcccaagctccgagcgctggacaactct
gagcaggaggcgctgaagaagtctctggagcaggagcagtctctgaggaggaaggctgag
ctggaatccgctcagttcaaactgaagctgcaagtcgtcaccaacaaatacggacaagcg
caacaagagctgcaggagctgagggccctgatggctcacgccggccggagctcgctctcc
tcctcttcctcctcctcttcctcctcctcggcgtccggctcgctcctcctcctctcgtcc
cagcggccggccggctcgcgggcggcgcagtacggcttctccaaggcgctgctggtgtct
caggccggaggctccagggttctgtcgtactgcgagacgctgagctgcctgctggcctcg
cagccctcgccgcacgccacgctgctgcccggctgcggcgtgaagaaggtgaccgtggtc
aacatgaaggccagtcagtacgtcccaatccactccaaacagatccgagggctgtccttc
aaccggcagaacgacagcctgctgctgtcggctgctctggacaacaccatcaagctgacc
agtctgctgaccaacacggtggttcagacctacaacactgggaagcccgtgtggagttgc
tgttggtgtttggacaacagcaactacgtctacgccggtctgagcaacggctccgtgctc
gtgtacgacaccagagacacgagcacgcacgtgcaggagctgcagccgctacgctcacgg
tgtcccgtggcgtccctgtgctacgtcccgcgggcggcgtccagctcgttcccctgcggc
gggctgatcgccggctcgctggagggcggctgcttctgggagcagctcaacgagacgacg
taccagccgcacgcgctgccgctggaggccgccggctgcaccgacatccaggtggagccg
gagagccggcactgcctggtcacctaccggccaggccgctcccacccggccctgcgctgc
gtgctcatggcgttgacgcgcgccccgcagcaggactcggcccagcagcccggctgctcg
tgctctccggtgcagacgttcagcgccggctcgtcctgcaagctgctcaccaagaacgcc
gtgttcaggaggccggacgggggcggggccctggtgtgtgccggggacgaggcctccaac
tccaccatggtgtgggacgcggccagcggcgctctgctgcagaagctgccggccgacctg
ccggtgctcgacatcagcccgttctctcagaacggagaacacttcctggcctcgctgacg
gagaagatgctgaagctctacaggtgggagtga
DBGET
integrated database retrieval system
