KEGG   Clinocottus analis (woolly sculpin): 137804149
Entry
137804149         CDS       T10471                                 
Symbol
skic8
Name
(RefSeq) superkiller complex protein 8
  KO
K12602  WD repeat-containing protein 61
Organism
cana  Clinocottus analis (woolly sculpin)
Pathway
cana03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cana00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    137804149 (skic8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cana03019]
    137804149 (skic8)
Messenger RNA biogenesis [BR:cana03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     137804149 (skic8)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_IFT122_1st Beta-prop_EML_2 Beta-prop_WDR3_2nd WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR90_POC16_2nd WDR55 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR75_1st CFAP251_N DSE1_N Beta-prop_VPS8 Beta-prop_SCAP Beta-prop_Aladin Beta-prop_Vps41 Beta-prop_RIG_2nd eIF2A Beta-prop_ACSF4 Beta-prop_WDR35_TULP_N Beta-prop_NOL10_N Beta-prop_WDR19_1st Beta-prop_NWD2_C Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_WDR41 Tricorn_2nd Beta-prop_SPT8 Ge1_WD40 PD40 ASA1 Beta-prop_Nup120_160 Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_IFT140_1st NBCH_WD40 PROPPIN Beta-prop_NUP159_NUP214 Cytochrom_D1 PAC11 TRM82_WD Beta-prop_WDR75_2nd WDR54 WD40_like Beta-prop_pof12 Beta-prop_IFT122_2nd Vgb_lyase UCP007778 DUF2415
Other DBs
NCBI-GeneID: 137804149
NCBI-ProteinID: XP_068459305
LinkDB
Position
Unknown
AA seq 305 aa
MSTQYSILFKQEHAHDDAIWTAAWGKSESDGSETIITGSLDDLVKVWKWSDEKLELQWTL
EGHQLGVVSVDISHDGAIAASSSLDAHIRIWDLDSGKQIRSMDAGPVDAWSVAFSPDSKH
IATGSHHGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG
KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAF
SPDNTHFVSSSSDKSVKVWDAGTRACINTFFDHQDQVWSVKYNSNGSKIISAGDDRSIHI
YDCPM
NT seq 918 nt   +upstreamnt  +downstreamnt
atgagcactcaatacagcattctttttaagcaagaacacgcacacgatgatgctatctgg
acagcagcgtggggtaaaagtgagtctgacgggtcagaaactatcatcaccggctcacta
gatgatttggtgaaagtctggaaatggtcagacgagaagctggagctgcagtggactctg
gagggccaccagctgggcgtggtgtcggtggacatcagtcacgacggagccattgccgcc
tccagctccctcgacgctcacatccgtatctgggacctggattctggaaaacagatcagg
tccatggacgctggaccagttgacgcttggtcggtcgccttctccccagactccaaacac
atcgccacaggaagccaccacggcaaggtcaacatcttcggtgtggagagcggcaagaag
gaatattctctggacactcgagggaaattcatcttgagcatagcttacagccctgatgga
aaatatctggccagcggcgccattgatggaatcatcaacatctttgacatcgccaccgga
aagcttctccacacactggaagggcacgccatgcccatcagatccctcactttctcgccc
gactctcagctgctggtcacggcctccgacgacggctacatcaaaatatacgacgtgcaa
catgccaacctggccggcacactgagtggacatggatcctgggttcttaatgtcgccttc
tccccagataacacccactttgtctcgagctcgtccgacaagagcgtgaaggtttgggac
gccggcaccagagcgtgtatcaacactttcttcgaccatcaagaccaggtgtggagcgtc
aagtacaacagcaacggctcaaagatcatctcggccggagacgaccgctccatccacatc
tacgactgccccatgtga

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