Clinocottus analis (woolly sculpin): 137804281
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Entry
137804281 CDS
T10471
Symbol
thoc1
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana03013
Nucleocytoplasmic transport
cana03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137804281 (thoc1)
09122 Translation
03013 Nucleocytoplasmic transport
137804281 (thoc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cana03019
]
137804281 (thoc1)
03041 Spliceosome [BR:
cana03041
]
137804281 (thoc1)
Messenger RNA biogenesis [BR:
cana03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
137804281 (thoc1)
Spliceosome [BR:
cana03041
]
Complex C
Other components
EJC/TREX
137804281 (thoc1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
137804281 (thoc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
Motif
Other DBs
NCBI-GeneID:
137804281
NCBI-ProteinID:
XP_068459526
LinkDB
All DBs
Position
Unknown
AA seq
676 aa
AA seq
DB search
MSSCVSSGFEGVTMSLFNFVDARDTFTASARNALVGKNSKPLVNVFNQFPGNEAEKKTTL
DQALRGVLGDQIVEQKACCDEYLSLIYLSIDAVTEGICSPTTPFLLLGDVLDCLPLDQCD
KIFSFVEENVSTWKSNSFYTAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLS
EKSGLNLQSQFNLENVTVFNKNEQESTFGQKHTEEKEDGMEVEEGEMGEEDAPAPCSIPI
DYNLYRKFWTLQDYFRNPVQCYDKFSWMTFLKFSDETLAVFKSYKLDDMQVSKRKLEELR
ASGGEHVYFAKFLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSSCVLNDDQ
TTWIEETTKLVFQLLKEIPPDGDKFATMVEHILNTEENWNGWKNEGCSSFVKERTVDDKP
KRPTRKRQAPEDFLGKGPDRKVFMGNDELTRLWNLNHDNMEACKSDSREFMPSLDEFFAE
AIEQADPTNMVEDEYKAVRNPNYGWRALRLLSRRSPHFFQPTNQKFKSLADYLDSMVSKL
AKELPKDIPSEEIKTGEEDDDDNGDNLLKDSNDSPSMQSKMVTNQQMDDIAAKLGAQWKT
LASHLEMKAAELREIETDSEDVDMQAKLLLVAWQDREGSQANVESLVTALSAAGFAQIAD
NLLAEFWRPAGETVMQ
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcttgcgtcagttccggtttcgaaggtgtaacgatgtcgctatttaattttgtc
gacgctagagacacatttacggcgtctgccagaaatgcgctggtcggtaaaaacagcaag
cctttggtaaatgtgttcaaccagttcccgggaaacgaggcagagaagaagaccaccctg
gaccaggcgctgaggggtgttctcggcgatcagattgttgagcagaaggcctgctgtgat
gaatacttgtctctcatctacctgagcattgatgccgtaacagaaggcatctgttctcct
acaactcctttccttctgctgggagatgtactggactgtcttcccctcgaccaatgtgac
aaaatattctcttttgtcgaggagaatgtttcgacctggaaatcgaactctttttacact
gccgggaagaactacttgctgaggatgtgtaatgatcttcttaggaggctgtccaaatcc
cagaatacggtattctgtgggcgaatccagctcttcctggcacgactcttccctctgtcg
gaaaaatcagggctcaatctgcagagccagtttaatctggaaaatgtaacggtgttcaac
aaaaatgaacaagaaagcactttcggccagaagcacacagaagaaaaggaagatggcatg
gaggtggaggaaggagaaatgggagaggaggatgctcctgcaccatgttccattccaatt
gactacaacttgtacagaaagttctggactctgcaggactacttcagaaaccctgtgcag
tgttatgataaattctcttggatgacattccttaagttctcagatgagacgttggcggtg
tttaagagctataaattggacgacatgcaggtctctaagaggaagctggaggagctgaga
gcatccgggggagagcatgtttactttgccaagtttctaacaagtgaaaagctgatggac
ttgcagctcagcgacagcaacttcaggcggcacattctcctgcagtacctaatcctcttc
cagtacctgaagggtcaggtcaagttcaaaagctccagctgtgtcctgaatgatgaccag
actacctggattgaagagacaaccaaactggtttttcagctgctgaaggagatccctcct
gatggggacaagtttgccaccatggttgaacatatcctcaacacagaggagaactggaac
ggctggaagaacgagggatgctcgagctttgtgaaagaaaggaccgtagatgacaaaccc
aaaagacccaccaggaaaagacaagcgccagaagacttccttggaaaagggccggaccga
aaagtcttcatgggaaatgacgagttgactcgactgtggaacctgaaccacgacaacatg
gaggcctgcaagtcagacagcagggagtttatgccatcgctggacgaattcttcgcggag
gccattgaacaggccgatcctactaacatggtggaggatgagtacaaggctgtgaggaac
ccaaactacggctggcgcgctctcaggctgctgtccaggagaagtccacacttctttcaa
ccaaccaaccagaagttcaagagcctcgcagactacctcgacagcatggtcagcaaactg
gccaaagagctgccgaaggatattccctctgaagagatcaagacgggagaagaggatgac
gacgacaacggagacaatcttctcaaagacagcaacgacagtcccagcatgcagagcaag
atggtgacgaaccagcagatggatgacatcgccgcaaagctgggcgctcagtggaagacg
ctggcatctcatctggagatgaaggcggcagagttgcgagagattgaaacggacagcgag
gacgtcgacatgcaggccaaactgctgctcgtagcctggcaggacagagagggatcccaa
gctaacgtggagagcctggtcacagcgcttagtgctgcaggattcgcccagattgcagac
aacctcttggcagagttctggagacctgctggagaaacagtgatgcaataa
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integrated database retrieval system
