Clinocottus analis (woolly sculpin): 137804304
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Entry
137804304 CDS
T10471
Name
(RefSeq) leucine-rich repeat-containing protein 4C-like
KO
K07523
netrin-G1 ligand
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
137804304
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cana04515
]
137804304
Cell adhesion molecules [BR:
cana04515
]
Immunoglobulin superfamily
NGL family
137804304
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
V-set
LRR_14
Ig_2
LRR_9
LRRNT
LRR_NXF1-5
DUF7617
Ig_6
Sp38
DUF4293
Syndecan
Motif
Other DBs
NCBI-GeneID:
137804304
NCBI-ProteinID:
XP_068459554
LinkDB
All DBs
Position
Unknown
AA seq
648 aa
AA seq
DB search
MLNKMTSSQQQQMMRGPRWNRALSDPFFVLLLALQLLVVAGLVRAQTCPSACSCSNQFSK
VICTRRGLRDVPDGISTNTRYLNLQENLIQVIKVDSFKHLRHLEILQLSKNHIRKIELGA
FNGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISEGAFEGLSNLRYLNLGMCNLKEIPNLIPLVKLDELEMSGNQLTVIRPGSF
KGLIHLQKLWMMHAQIQIIERNSFDDLQSLVELNLAHNNLTLLPHDLFTPLHHLERVHLH
HNPWNCNCDILWLSWWLKEMVPANTSCCARCSSPTHHKGRYIGELDQNYFHCYAPVIVEP
PADLNVTEGSAAELKCRASSLTSVSWITPNGSIMTHGAYKIRISVLNDGTLNFTNVTMQD
TGTYTCMVSNSAGNTTASATLNVSSTENSSFSYFTTVTVETIETPHNEAYTTAVQQKVGP
TPSAGSWESVSATSTTTTTVRTPLYTRATEKTYTIPVTELGGEGSLNGLDEVMKTTKIII
GCFVAITLMAAVMLIIFYKMRKQHHQQNHHAPTRTIEIINVDEDCVTGGPGMEGHLSLPP
LEHEHLNHYNAYKTAYNHASTINSIHSSAHEPLLIRASSKDNVQETQI
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgttaaacaagatgacctcctctcagcagcagcagatgatgcgaggtcctaggtggaac
cgggccttgtccgaccctttttttgtgctgcttctggccctgcagctgctggtggtagca
gggctggtacgtgctcagacgtgcccctctgcctgctcctgtagtaaccagttcagcaaa
gtcatctgcacccggcgaggcctccgggatgtccctgatggcatctctaccaacacccgt
tatctgaatctgcaagaaaatctaattcaggtcataaaggtggacagcttcaagcaccta
agacatctggagatcctgcagctgagtaaaaaccacatacgcaaaattgagctgggggcc
ttcaatggactggccagcctcaataccttggagctttttgataaccgcctcactactatc
ccaaacggggcatttgagtacctgtccaaactaaaagagctttggctaagaaataacccc
atagagagcattccctcctatgctttcaacagagtgccctcattacgtcggttggacctt
ggggagctcaaacggctctcctacatatctgagggggcctttgaagggctgagcaatctg
cgctacctaaatctgggaatgtgcaatctgaaggaaattcccaatcttattcccctggtg
aagcttgatgaactggagatgtcggggaaccagctaactgtcatccgaccgggctccttt
aagggacttatccatttgcagaagctatggatgatgcatgcccagatccagatcatagaa
agaaactcttttgatgacctgcaatcattggtggagctcaatctagcccataacaacctt
accctcttgccccatgatcttttcactcctttacatcacctggagagggtgcatttgcac
cacaacccttggaattgtaactgcgacattctctggcttagctggtggctaaaggagatg
gtaccagctaacaccagctgctgtgcccgctgcagctcaccaactcaccataaaggacga
tacattggtgagctggaccagaactactttcactgttatgctcctgttattgtggagcct
cctgcagacctaaatgtgacagaaggaagtgctgcagagttgaaatgcagagccagctcc
ttgacctcggtaagctggattacacccaatggttccatcatgacacacggtgcttacaag
ataagaatctccgtgttaaatgatggcaccctgaacttcaccaatgtcaccatgcaagac
acaggcacatacacatgtatggtcagtaattctgcaggaaacacaacagcatctgccacg
ctaaatgtgtcttctacagagaacagcagcttcagctacttcaccacagtgacagtggag
accatagaaacaccacataatgaagcctacaccactgctgtgcagcagaaggtgggccca
acaccttctgctggttcgtgggagtctgtttcagccacctccacaactaccacaacagtc
cggactccactctacactcgcgccacagagaagacttacacaatccctgtcacagagctg
ggtggggaaggctcactgaacggcttggatgaggtcatgaagacgactaagatcatcatt
ggctgctttgttgcaatcacactcatggcagcagtcatgctgatcattttctacaagatg
cgcaaacagcaccaccagcagaaccaccacgcacccacacgcaccattgagatcatcaat
gtggacgaggactgtgtaacaggaggcccgggcatggaaggccacttaagcctgcctcct
cttgagcatgagcacctcaaccactacaacgcctataagactgcatacaaccatgcctcc
actatcaactccatacacagttcagcgcacgaacctttgttaatccgggccagctcaaaa
gacaatgtacaagagacccaaatctaa
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