Clinocottus analis (woolly sculpin): 137804460
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Entry
137804460 CDS
T10471
Symbol
myo5c
Name
(RefSeq) unconventional myosin-Vc
KO
K10357
myosin V
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
137804460 (myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cana03019
]
137804460 (myo5c)
04131 Membrane trafficking [BR:
cana04131
]
137804460 (myo5c)
03029 Mitochondrial biogenesis [BR:
cana03029
]
137804460 (myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cana04812
]
137804460 (myo5c)
Messenger RNA biogenesis [BR:
cana03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
137804460 (myo5c)
mRNA cycle factors
P-body specific factors
137804460 (myo5c)
Membrane trafficking [BR:
cana04131
]
Others
Actin-binding proteins
Myosins
137804460 (myo5c)
Mitochondrial biogenesis [BR:
cana03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
137804460 (myo5c)
Cytoskeleton proteins [BR:
cana04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
137804460 (myo5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Csm1_N
AAA_16
AAA_22
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
137804460
NCBI-ProteinID:
XP_068459810
LinkDB
All DBs
Position
Unknown
AA seq
1745 aa
AA seq
DB search
MNMALLELYTEYNRVWIPDADHVWKSAEIMRDFHSGDNVLKLLLEDGTEHHLSVDPVTPQ
LPPLRNPDILVGENDLTALSYLHEPAVLHNLKVRFAESRIIYTYCGIILVAVNPYKQLHV
YGDAIIHAYSGQNMGDMDPHIFAVAEEAYKQMARNHKNQSIIVSGESGAGKTVSARYAMR
YFAVVSKSGSKTHIEDKVLASNPITEAIGNAKTTRNDNSSRFGKYTEISFDRRYRIIGAN
MRTYLLEKSRVVFQTDNERNYHIFYQMCSCAHLPQFKNLRLLSADKFRYTCKGGDITIEG
VDDKKDMEETRKTFSLLGLKEDFQSNVFKVLAAILHLGNVKIRNSGDGKSSVAPGDQHLA
VFCELLSVSAEELGRWLCHRRIVLVAETVVKPVPIERAVNAQDALAKQIYAHLFDCIIKR
INSALQVPGQQHAFIGVLDIYGFETFDINSFEQFCINYANEKLQQQFNLHVFKLEQEEYM
REDIPWTLIDFYDNQPVIDLIEAKMGILDLLDEECLFPQGTDQSWLQKLFNYLDANPLFE
KPRLSNEAFVIQHFADKVEYQCTGFLEKNRDALYEELVDIMRVSKFPFLANLFREEKQSS
VTSKVVKVRPARPGVKPANKQLRTSVGDKFCSSLSLLMETLNATTPHYVRCIKPNDEKLP
FEYDSRRVVQQLRACGVLETIRISAQSYPSRWTYNEFYGRYSILMSHQESDFNDKKQTCK
NVLQRLIQDPNQYKFGRTKIFFRAGQVAYLEKLRLDRLRGACVTIQKHVRGWSKRRKYLR
MREAAIILQEYIRGKKTIRKTVTAATLKRGWAALVIQRYWRGYRMTQIFQVVRLASITIQ
AFTRGWMARKRYKKMVKEQKALILQKYARAWLARRRFQTMRRLVINVQLSYRVQQLRKKV
EEQNKENRGLMERLTSLANSHSQTVDKLQGLEAQLEKSTSQKAVLEAREKKSKEDASLTT
AQLQKEIHALNLEKQNLENRFKAGTKEAKESFDQIKMNLLEEKEHEARFRKVAENNAEIQ
RQDHETEVETLKEEIKRLKEQNIRLQRELEEAGQVNADLQEQVIQLTKHVKVIPELRRDL
NNLQNHRTNMDRKMKQQSEQARAKMNDITRQLLGGVVEEEVILGLTPDDPEKIYEVEDLL
AAFDGLQKATRILENRQKEQKESYETQVQGLKLKVDHLQNENSQLQNLFQEKSNLNENIL
QEVSRLSSENSVIPELKLQTSELQRQKQELEAHVEMQSRELAEKTEEITNILQKKIKEES
SQCRHFEAKAEELEELKRELQGRVEELEDDTAHLKRQLLMESEAKNKLRQETSQLTAENM
DFEEQLDQKDRMIKKLQNHIKSLETSQRAKQTPAPATPKDYLGMLEYRREDESRLIQNII
LDLKPKGVVVNMIPGLPAYILHMCIRHADYLNDEVKLKSLMNAIIVAVKKVITSQPKDFE
LLSFWLSNMYQLLNCLKQYSGEEEFMKQNTARQKKNCLQNFDLSEHRQILSDLAIQIYHQ
FVSIMENTLTPAIVPGLLEHESLQGISSMKPTGFRKRSNSIYEDSETHTISSIVQQLSVF
HSTMSQHGMEQGLIKQAVKQMFFLIGATTLNNIMLRKDMCSCRKGMQIRCNISYLEEWLK
EKELQSSNAIDTLMPLSQAAWLLQVNKSTDDDVKEITDKCTELNPVQIVKILNSYTPIDD
FEKRVTSSFVRKVQSLLQDRDGPSSQLMLDSDYRFQVTFPFCPSSQALELLQVPSSLHLS
FLTRI
NT seq
5238 nt
NT seq
+upstream
nt +downstream
nt
atgaatatggctttgttggaactgtacaccgagtacaaccgagtgtggataccagatgca
gatcatgtgtggaagtcagccgagattatgagagactttcattctggggataatgttctc
aagttgcttcttgaagatggcactgagcaccacctctctgttgaccctgtgacaccacaa
ctccctcctcttcgcaacccggacatcttggtgggggagaatgacctcaccgctctcagc
tacctgcacgaacctgcagtccttcataatcttaaagtgcgatttgcggagtccagaatc
atctacacctactgtggtattatactggtggctgtaaatccatacaaacagcttcacgtc
tatggagatgcaatcattcatgcctactcaggccagaacatgggggacatggaccctcat
atatttgcagtagcagaggaggcttacaaacagatggccagaaaccacaagaaccagtcc
atcatcgtcagtggtgaatctggagctgggaaaacggtgtctgctcgatatgctatgagg
tactttgcggttgtgagcaaatctggaagtaagactcacattgaagacaaagtcctggca
tccaatccgataacagaggcaataggaaacgcaaagaccacccggaacgacaacagcagc
cgtttcgggaaatacacagagatcagctttgacaggaggtaccggatcatcggagcgaac
atgaggacctatctcttggagaaatcgagagtcgtctttcagacagacaacgagcgaaac
taccacatattctaccagatgtgttcctgtgctcacctgccacagttcaagaatctaaga
ctgctgagtgcggataagttccggtacacctgcaagggcggggatatcactattgaaggt
gtcgatgacaagaaagacatggaggagactcgaaagaccttctcactgctggggttaaag
gaggactttcagtcaaatgtgttcaaagttttggctgccattttgcatttgggaaatgtc
aaaatcagaaactctggagatggaaaatcatcagttgctcccggtgaccaacacctggcg
gtcttctgtgagctgctgagcgtgagcgcagaagagttggggcgttggctgtgccatcgg
aggatcgttctggtggccgagacggtggtgaagccggtgcccattgagcgggctgtaaat
gcccaagatgcccttgccaagcagatctatgcccacctgtttgactgtattattaagagg
ataaatagtgcactgcaggttccgggtcagcaacacgctttcattggtgtactggacatt
tatggctttgaaacgtttgacatcaacagctttgagcagttttgtatcaactatgcgaac
gagaagcttcagcagcagtttaacttgcacgtgttcaagctggagcaagaggagtacatg
agagaggacataccgtggacgttgatagatttctatgacaaccagccggtcattgacctg
attgaagcaaagatggggatcctggacttgcttgatgaagaatgtttgtttcctcaaggt
actgatcaaagctggctgcaaaagctcttcaactaccttgatgccaatcctctgtttgag
aagcccaggttgtcaaatgaggcatttgttattcaacactttgcagacaaggtggaatat
caatgtacaggttttcttgaaaagaacagagacgctctgtatgaagaattggttgacatt
atgagagtcagcaagtttccttttctggccaaccttttccgagaggagaagcaaagctct
gtgacaagtaaagttgtcaaagtgagacctgccagacctggagtgaaaccagccaataaa
cagttgagaacctctgtgggagataagttctgcagctccctctctttactgatggaaaca
ctgaacgctaccacccctcactatgtacgctgcattaagcccaatgatgaaaagctccca
tttgaatatgactccaggagggtggtgcagcagttgcgagcgtgtggagtccttgaaact
attcgtatcagcgcacagagctatccgtccagatggacatacaatgagttttatggccga
tacagtatcctgatgtcacaccaggagtcagacttcaatgacaagaaacagacctgcaag
aacgtgttgcagaggttgattcaggaccccaaccagtacaagtttggtcgaacaaagatc
ttcttccgagctggtcaggtagcttatctcgagaagctgcgtctggaccgacttagagga
gcctgcgtgaccatccagaaacatgtccgcgggtggagcaagaggaggaagtatctgcgc
atgagagaggcagccatcatcctccaggagtacatccgtggaaagaagacaatccgtaaa
actgtgactgctgcaacactgaagcggggctgggcagcactggtgatccagagatactgg
agaggttaccgcatgacacagatcttccaggtagtccgtctggcttccatcaccatccag
gccttcacgcgaggctggatggcccgtaaacggtacaagaagatggtaaaggagcagaaa
gccctcattctccagaagtatgccagggcgtggctggcacggcggcgttttcaaaccatg
cgtcggctggtgatcaatgttcagctctcctacagggttcagcagctcagaaagaaggtt
gaagagcagaacaaagagaaccgtggattgatggaaagacttacaagcttggccaactcc
cactctcaaaccgtggacaagcttcagggtctggaggcacagctggaaaaatcaaccagt
cagaaggcggttttggaggcgagagagaaaaagagcaaagaagacgcaagtctgaccact
gcacagcttcagaaggaaatacatgcactaaatcttgaaaagcagaacttggagaacagg
tttaaagccggcaccaaagaggccaaagagagctttgatcaaataaagatgaacctcctg
gaagagaaagaacatgaagcaaggtttagaaaagttgcagagaacaacgcagagatccag
agacaggaccatgagacggaggtggaaactctgaaagaggagattaagagattgaaagaa
cagaatatccgtctgcagagagagttggaggaggcgggccaggtgaacgctgacctgcag
gaacaggtcatccagctcaccaaacatgtcaaggtcattcccgaactccgcagagatctc
aacaacctgcaaaaccacaggactaacatggaccgaaagatgaagcaacagtcggaacaa
gcaagagctaaaatgaacgatattacgagacaacttcttggtggtgttgttgaggaggag
gttattttggggctaactccagacgacccggagaagatttatgaagtggaagatttgctg
gcagcctttgatggcctacagaaagcgaccagaatactagaaaaccgccagaaggagcag
aaggaaagctacgagacacaagtgcagggcttgaaattgaaggtggaccaccttcaaaat
gagaacagccagttgcaaaacctgttccaggagaaaagtaatctcaacgaaaatattctc
caagaagtgtccaggctcagcagcgagaactcagttataccggagctcaagctgcagact
tcagagctgcagagacaaaaacaagagttggaggcccacgtagagatgcagagcagagag
ctagcagaaaaaactgaagagatcacaaacattcttcagaagaagattaaagaagaaagc
tcccaatgcaggcactttgaggcaaaagctgaagagctggaggagttgaagagggagctt
caaggcagagtagaggagctggaagacgacactgctcatttgaagagacagctgctgatg
gagagcgaagcgaagaacaaactaagacaggagacttcacagttaactgctgaaaatatg
gactttgaagagcagctcgaccagaaagacagaatgataaagaaactccagaatcacata
aagagcctcgaaacatcacagagagccaagcaaacgcctgcgccagccactcccaaagat
taccttggcatgttggagtacaggagagaggatgaatccaggctcattcaaaacatcatt
ctggacctgaagcccaagggcgtggtggtcaatatgatccccggtctgccggcttacatc
ctccacatgtgcatccgccatgctgactacttgaacgatgaagtcaaactcaagtctctt
atgaatgcgatcatagttgctgtcaaaaaggtcatcacgagtcagcccaaagactttgag
ttgctgtcattctggctctcaaacatgtaccagctgctcaactgtctgaagcagtacagc
ggggaagaggagttcatgaaacaaaatactgctcgacagaaaaagaactgcttgcagaat
tttgacttgtctgaacacagacagattctcagcgacctggccattcaaatctaccatcag
tttgtctccatcatggaaaacacactaactcctgcaattgtgccaggtttgttggagcac
gagagcctccaggggatttccagcatgaagccgacaggcttcaggaagcgctccaacagc
atctacgaggactcggagacacacaccatctcctccatcgttcagcagctcagtgtcttc
cactccaccatgagccagcatggcatggagcagggactcatcaaacaggcagtcaagcaa
atgttcttcctcattggtgcgaccaccctcaacaacatcatgctccgaaaagatatgtgt
tcctgcagaaaggggatgcaaatcaggtgtaacatcagttacctcgaggaatggttgaaa
gagaaggaactgcaaagctctaatgctatagatactctgatgccgttgtctcaggccgcc
tggctgctgcaagtcaacaagtccactgacgacgacgtcaaggagatcactgacaaatgc
actgagctcaacccagttcagattgtcaagattttgaactcgtacactcccattgatgat
tttgagaaaagggtgacgtcgtcatttgttcgcaaagttcagtcgttactacaagatcgt
gacgggcccagctcacagctgatgctggactcagactatcgtttccaggtcacgtttcct
ttctgcccgtcgtcgcaggctctggagctgctgcaggtcccgagcagccttcacctgagc
ttcctaacccggatctga
DBGET
integrated database retrieval system
