Clinocottus analis (woolly sculpin): 137804463
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Entry
137804463 CDS
T10471
Symbol
hps5
Name
(RefSeq) Hermansky-Pudlak syndrome 5 protein
KO
K20191
Hermansky-Pudlak syndrome 5 protein
Organism
cana Clinocottus analis (woolly sculpin)
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cana04131
]
137804463 (hps5)
Membrane trafficking [BR:
cana04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
137804463 (hps5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_HPS5
TPR_HPS5
PEP5_VPS11_N
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_RIG_2nd
WD40_CDC20-Fz
Beta-prop_Vps41
Beta-prop_THOC3
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_1st
ANAPC4_WD40
Beta-prop_WDR3_1st
Motif
Other DBs
NCBI-GeneID:
137804463
NCBI-ProteinID:
XP_068459814
LinkDB
All DBs
Position
Unknown
AA seq
1119 aa
AA seq
DB search
MPLIPVVPENHSHVLAEFDCLDPLLSALRLDSGRLKCTCLAVSRKWLALGTSAGGLHLIQ
KEGWKQRLILTHKEGSIAEVACCPHDEDFIAVATSQGLVVVWELQLERRGRPERVSVSWE
HRGQAITALCWDSSALRVFVGDTGGKVSFLRAGSSKMGKGSAFVIFPVQTVTTVDSRVVQ
LGYQDGRLLVSSLSRCYLCDTEREKFWRVGNKERDGEYGACFFPQNRGLLVGQPPLMYSA
RPGSRIWEVSFNGEVLSTHQFKQPLACPPLPLITYRDEPQHYNPVQKSPQSIAFPKLLYF
GDQNLLTWTDSAIYIFTPQNGQVLLWTEVKDLVDIAVYRNELFCLHGSGRLSHLSLLSAE
RCVERLLRRESWPLAAIVCCMFQHTIATTRARKAIPIDRLEHLRSQLSSNTHHELTGQLE
EVITKLEPLDSASSSRRSSISSHESFNVLDCGIYRVISRRGSQSDEETSSLIHQSMSEEE
RLKEFSFAQEDEPVDHDPQSSERMEAERSEQGMHFHLPLSFRPKPPRIALQAVKDSVSSF
VKKTTEKINTLQMNSELWQRPEFKDSGHLDMSASASFSEEMDNEVYDDVPNAEADTQELC
SATERAMSQIQDPLVLLDPVCLGEALQEWLAVLERILGPVVHRSTAAKDSNVDEPGEERW
DYLNSCSEQQEESLILSGEPTESITEEKKEESHELEEKEDQFDSTEKKAEVSNGSPQDPV
RVVSPKPVPSDLLANLTQLATLYTEMRCFRNQENEVLGCTTFLRSYFFLLDHERVRRMCL
LCCQDQPEVQSSFIEAMLDLTQSSKVVEVIQRGDLLRSLRSLRELQPWSAPPLLAHLHRL
YQKHREAAARSFTQFYPTITPADVMAMAQQSHFLAYLDNLVQSQTEEHRLSFLQSLLEPE
SLRQDWLELALTHDAPQRCDTLSPDGQPRWRSHCFSWGYGRLLSLLIRLPADLSSKQKMA
ETCRSHGYWMGYIYLCCELQCRREAFTTVCQLDDISLLEEADGVLPQTLEEWRLLIQLSQ
RCSGAVDSEQVTGVNGSNWSNGSADCGGKISPENLTLMLARTAGPDRAMAVLEECGVQLV
LSPHSTLVCELLRVTEKRQRAMIQTMLERCDRFLWSQHA
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgcctttgataccagttgtgccagagaaccacagtcatgtactggccgagtttgactgc
ctcgatccacttctgtctgctctgcgtttggactctggcaggctcaagtgtacctgtttg
gcagtgtcaaggaagtggctcgctttaggaacatcagcaggagggttgcacctgattcag
aaggagggctggaagcaaaggctcatcctcactcacaaggagggctctatcgctgaggtg
gcatgttgccctcatgatgaagactttattgctgttgcaacaagtcagggtctggtggtg
gtgtgggagctgcagctggagcgacggggtcgtccagagagagtcagtgtgtcctgggag
cacagaggtcaggccatcactgcactctgctgggactccagcgcacttagagtttttgtc
ggcgacactggaggcaaggtgtcctttctgcgcgcaggatcctccaagatgggcaagggg
tcagcattcgttatcttccctgttcagaccgtcactactgtggactccagagtggttcag
ctcgggtaccaagatggtcgcctgctagtgtcttccctcagccgctgctacctctgtgac
acagagagggagaagttctggcgtgttggaaataaggagcgtgatggggagtatggagca
tgttttttccctcagaacagagggttattggttggtcagccccccctgatgtactcggcc
cggccagggtctcgaatatgggaggtcagttttaatggcgaggttctgagcacccatcag
tttaaacagccactggcctgtcctcctctgcctctcatcacttacagagatgagccacag
cattacaacccagtgcagaagagccctcagtcaatcgccttcccgaaactgctttatttt
ggagaccaaaacttgctcacttggaccgattcagctatttatatattcacacctcagaat
ggtcaagtgcttctgtggactgaagtcaaagacttggttgatattgccgtctaccgcaac
gagctcttctgtcttcatggcagtggacgcttgtctcacctctccctgttatctgctgag
cgctgtgttgagcgtctgctccggagggagtcctggcctctggcggccatagtctgctgt
atgtttcagcacacaatcgccaccaccagggccaggaaagcaattcccatcgaccgcctt
gaacatctccggtcccagctcagctccaacacgcaccacgagctgaccggccagctggag
gaagtcatcactaaactagagcctttggactccgcctccagcagccgaagaagtagcatc
tcctcacacgagagcttcaacgtcctggactgtggaatctatcgcgtgatcagccgcaga
ggaagtcagtcagatgaggagacgagctcgctcatccatcagtccatgtcagaggaggag
cggctcaaagagttcagctttgcgcaggaggatgagccggtggaccatgatccacagagc
agtgagcgtatggaggctgagcgatctgagcaagggatgcacttccacctccccctgtca
ttccgtcccaaacctcctcgcatcgctctgcaggctgtcaaagacagtgtttctagtttt
gttaagaagacaacggagaagattaacaccctccagatgaactctgagctctggcagcgg
cctgaattcaaagacagcggacatttggacatgtcggcctcggcttccttctcagaggaa
atggacaatgaagtttatgatgacgttccaaacgctgaggccgacacgcaggaactttgc
tcagcgacggagcgtgctatgtcccagatccaagatccattggtgctactggatccagtc
tgcctgggagaagctctgcaggagtggctggcggtgctggagcgaatactcggacctgta
gtgcacaggtcaactgctgcgaaggattcaaatgtggatgaaccaggagaggagaggtgg
gattatctaaactcctgctcagagcaacaagaggagtctttgattttgtcaggagaacca
acagagagcatcacagaggagaagaaagaagagtcacatgagcttgaagaaaaagaagac
cagtttgactccactgagaagaaggctgaagtttcaaatgggagccctcaagatcctgtt
cgagtggtgtctcccaaacctgtaccatcggatctactggcaaatctcacccagctggca
acattatacacagagatgaggtgctttagaaaccaggagaatgaagtattgggttgtaca
actttcctgcgctcctacttctttctgcttgaccacgagcgtgtgcgaagaatgtgtctg
ctgtgttgtcaggatcagccggaggtgcagagctccttcatcgaggccatgctagatctc
actcagtccagtaaggtggtggaggttattcagagaggggatttgctgagatcactgcgc
agtttaagagagctgcagccctggagtgctcctccactcctcgctcacttacacaggctg
tatcaaaagcacagggaggcggctgcccgctcattcacgcagttctatcctacgataact
cctgctgatgtaatggccatggctcaacaaagccacttcctggcgtacctggataatctg
gtccaatcacaaactgaggagcacaggttgtcatttctgcagtcgctccttgaaccagaa
tcactgagacaggattggctggagctcgcacttacccacgatgcccctcaacgctgtgat
actctgagccccgatggacagcccaggtggcgttctcattgtttcagttggggttatggg
cgcctcctgtcactcctgattcgtcttcctgcagacctgtcctccaagcagaagatggca
gagacttgccgcagccacgggtattggatgggctacatctacctctgctgtgagctgcaa
tgtcgcagagaagcgttcactaccgtctgtcagctggatgacatcagtctgctggaggaa
gccgatggtgttttgcctcagaccttggaagagtggaggctcttgatccagttatctcag
cgatgcagcggtgcggtagactcggagcaggtcacaggtgtgaatgggagcaactggtcc
aacggctcggcagattgtggtggaaagatcagcccagagaacctgaccctgatgctggcc
cgaacggccgggcctgaccgcgccatggccgtcctagaggagtgtggagtgcagttggtc
ctttcgccgcactccacactggtctgtgaacttctgagagtcactgagaagaggcagaga
gcaatgatccagacgatgcttgagcgctgtgatcgcttcctctggtctcagcacgcctga
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integrated database retrieval system
