Clinocottus analis (woolly sculpin): 137804474
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Entry
137804474 CDS
T10471
Symbol
gtf2h1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana03022
Basal transcription factors
cana03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
137804474 (gtf2h1)
09124 Replication and repair
03420 Nucleotide excision repair
137804474 (gtf2h1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cana03021
]
137804474 (gtf2h1)
03400 DNA repair and recombination proteins [BR:
cana03400
]
137804474 (gtf2h1)
Transcription machinery [BR:
cana03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
137804474 (gtf2h1)
DNA repair and recombination proteins [BR:
cana03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
137804474 (gtf2h1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
PH_TFIIH
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
137804474
NCBI-ProteinID:
XP_068459843
LinkDB
All DBs
Position
Unknown
AA seq
550 aa
AA seq
DB search
MAALSEEVLLVLKKVRQRKQDGTLYLMAERIAWGPEGKDRFTVSHLYADIRCQKISPDGK
SKIQLQLVLHTGESTTFHFSNDSTALTDRDAAKELLQQLLPKFKKKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISADEFWANRLGDTNHADTSLTNNKQEVGISGAFLADIRPQTDG
CNGLRYNLTADIIESIFRTYPTVKQKYCENVPHNLTEKEFWTRFFQSHYFHRDRINTGTQ
DIFSECAKQDEIGLKSMVVQGVKNPLVNLLSLQDTTLDEGYGGFTTLPSTSNPNRSVKDS
SNSAIIKRFNHHSAMVLAAGARKGETPADQGSETNSTDGNSRDSDFFQPPVKKVKLKEAI
EYEDLQSENRPKTVALNLKKSDRYAHGPVPLQSQQYTTSQDIINSVNYIQHEMVNYKPNL
TQVLSSTTASSAIAALSSGGVLMQAATQQAINQMVPSEVQGELKHLYTAAGELLRHFWSC
FPVNTPFLEEKVMKMKSNLERFQVTKLCPFQEKIQRQYLSTNLTGHLEEMLQTAYSKFHV
WQTRRMLRKT
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcagcattatcagaggaggtgctgctggtgttgaagaaggttcgccagaggaagcag
gatggcacactttatctgatggctgaacggatagcctggggtccagaggggaaagaccgg
ttcacagtcagccacttgtatgcagatattcgctgtcagaagatcagcccagatggtaaa
tccaaaattcagctgcagctggtgcttcacactggcgagagtaccacattccacttttcc
aatgacagtactgcactcacagacagagatgctgccaaggagctgctgcagcagctgctg
cccaagttcaagaagaaagccaacaaggaactggaggagaaaaacaggatgcttcaagaa
gatccagtgcttttccagttgtataaagatctggttgtgagtcaggtgatcagtgcagat
gaattctgggcaaaccgcttaggagacacaaaccatgcagacacctctttaaccaacaac
aaacaggaagtcggtatatctggagcctttctggcagacattagacctcagacagatggc
tgcaatggtttgagatataatctgactgctgacattattgaatccatctttagaacatac
cctacagtgaaacagaagtattgtgaaaatgtgcctcataacctgacggagaaggagttc
tggacccgctttttccagtcccattattttcacagagaccgcatcaacacaggaacacag
gatatcttctcagagtgtgccaagcaggatgaaatagggttaaagtctatggtggttcaa
ggagtgaagaatcctttggtcaacctcctgtcgttacaggatacaacattagacgagggt
tatggaggttttacaacattgccctcaacttccaatcccaatcggtcggtgaaagacagc
agcaactctgccatcataaagcggttcaaccatcacagtgccatggtgctggcagccggt
gcacggaagggggaaacaccagctgaccaaggaagtgagaccaacagtacagatgggaac
tcaagggattctgacttcttccagcctcctgtaaagaaggttaaattaaaagaagccata
gaatatgaagatctgcaaagtgaaaacagaccaaaaactgtcgcgttaaacctcaagaag
tctgacaggtatgctcatggtccagtgccacttcagtcccaacagtatacaacgagccag
gatatcatcaactctgtcaactacatccagcatgagatggtcaattacaaacccaacctc
actcaggtgttgtccagcacaacagctagttctgctatcgcagcactttcttcaggtggc
gtcctcatgcaggcagcaacgcagcaagccattaatcaaatggtaccttctgaggttcaa
ggagagctgaagcatctttatacagctgctggagagttgttgagacacttctggtcctgt
tttcctgtaaacacaccatttttagaggagaaggtgatgaaaatgaagtcaaatctcgag
agattccaggtgaccaagctgtgtccttttcaagagaagattcagcgtcagtacttaagt
acaaatctcacaggacatttggaggagatgttgcagacagcctacagcaagttccacgtc
tggcaaacccgtcgcatgttgagaaaaacctga
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