Clinocottus analis (woolly sculpin): 137804532
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Entry
137804532 CDS
T10471
Symbol
rb1cc1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
137804532 (rb1cc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cana01009
]
137804532 (rb1cc1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cana04131
]
137804532 (rb1cc1)
03029 Mitochondrial biogenesis [BR:
cana03029
]
137804532 (rb1cc1)
Protein phosphatases and associated proteins [BR:
cana01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
137804532 (rb1cc1)
Membrane trafficking [BR:
cana04131
]
Autophagy
Autophagosome formation proteins
ULK complex
137804532 (rb1cc1)
Mitochondrial biogenesis [BR:
cana03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
137804532 (rb1cc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
ubiquitin
Motif
Other DBs
NCBI-GeneID:
137804532
NCBI-ProteinID:
XP_068459930
LinkDB
All DBs
Position
Unknown
AA seq
1628 aa
AA seq
DB search
MKLYVFQVNNGSTLTFDTDLAVQSVLELKHAIQAKYKIAIQHQVLVVNGGECMAAERRVC
SYSAGTETNPIFLFNKEMILCDRDPTIPKTTFSIESEIQVKVEESLLMPAVFHTVASRTQ
LALEMFEVAKKLCSFCERLVHDEHMQHQGWAAIMANLDDCTLSYQKLLIKFDTSYINYQH
DLEEIKVKLSKLGTSVSVMARIPLLECLTRHSYKESMEKSTSTPGKDSDDTEKEKSTDSQ
RPSKSSASISASGTSTCEATGNQETNKMTDSGGLRAALLDDDDDDDDDDDDDDDDEDGAE
FTNPSCFNVTLLDWINVQDRPNDVESVVRKCFDSINRLDPRVIQPFLTDCRDTISKLDNQ
NMKAIKGLEDRLYALDQMIASCKKLVNEQKELAQGFLANQKRAENLKDTSVLPDLCLSHT
NQLMIMLNNHRKLLDIKKKCTTAKQELANNLQVRLKWCCYVMLHADQDGEKLQALLRLLT
ELIERVRVVEALSTVPQMYCLAVVEVVRRKMFMRHYREWAYALVKDGKRLYEAEKFKRES
FGKLFRKSFLRNRLFRGLDSWPPTSFCTRKPRRFDDELPDISLDDLQYLKSCCPLEVQPF
LMVPTMCDFEPLNRHVETLHKLVQAAQSVDEMSQTITDLLSEQRISFSQRSSMLIPESGS
IPGTTTPRSPKTPSSLSLQGPSCQPLHVPVPAPLEDLSPDSIDAQTFDFETIGHPNMDPV
LQQGSLDLDSLVESPESDFMSAVNEFVIEENLTSPNPISDPISPEMMVESLYSSVINAID
NKRMQDTTILERENSRITVLKQVADKYRSAAEESHSNFRSVKDDLHHLRGMVLKEQHDFG
FVLRNLTTEVSNIVDSICQTQKLELKDQHQSELLSLRQELEKQVQTLTEENQVNQNIVRD
VQHAMLELEGLMERKEKELTQLENEKEQCAVTKSNQTERIKNLEQMMSDQTEEIKTLSAS
RDSLTNQLENLHVEIERGQQKIRQELEVVEQSHLKEMEEKMKQDHTAKLENLTKVNQEAL
EHLSAENSAKLSEAAEHHTAALKEKENQMKDLEARVTELAELRCKVEVELAFKESETEEL
RLLFEEAKMQQAETVKSQVEAATKVLSEELADVKERLHVKNDEYEVDLAELRSLMRLEKD
HCISELVNIHEEEAILLRNELISVQRQVQDADKNHAEQQQKLEQAFEQQAAALNEEKEKR
FRSFQELEQELRTVISNLLTDNDLLSKKIEQDRQATERDFEKEVTLQVTSPDALTELEQQ
KEDMEKRLLDKIRHLEDELHCRQSSKSDEGLPLHAEGRADAGAPLSLDSALQERLQQERA
CLQSQMDLLEKKKNEEMQNLKTSLIAEQQTNFNTVLTREKLKKEQIINDLTEKWRKVTQQ
QEKDKALIETLSEDRASVMQEKKHLEEELNRLRSTALVSSSFFSPNPSGQEISEAAAAAA
RALPLVGAFSSEPMGETDRLASVAAIREDEQVDSAVEASMVAVHDNLLMSEEKQRILLLE
RTLHMKEEENKRLSQRLMSQSMSSVSSRHSDKIAIRDFQVGDLVLIILDERHDNYVLFTV
GPTLYFLHSESLTALDLKPASGTSRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVK
AVPWNRKV
NT seq
4887 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtatgtgttccaggtcaacaatggcagcacattgacatttgacactgatctt
gctgtccagagtgtactggaacttaaacatgccatccaagccaaatataagattgcaatt
caacatcaagtccttgttgtcaatggaggggaatgtatggctgcagagaggcgtgtctgc
agctacagtgctggcactgaaaccaaccccatattcctgttcaacaaagagatgatcttg
tgtgaccgggatccaacgatccccaagaccaccttctcaatagagagtgagattcaggtt
aaagtagaggagtctctactgatgccagctgtctttcacactgttgcctcgcgaacacaa
cttgctctggaaatgtttgaagttgccaagaaactttgctctttctgtgaacgattggtt
catgatgaacacatgcaacaccaaggctgggctgccattatggctaatctggacgactgc
actttgtcttatcaaaagttgctcataaaatttgacacttcatacataaactatcaacat
gacttggaggaaattaaggtcaaactctcaaagttagggacatcagtttctgtaatggca
aggatacctctgctggaatgtttgacaagacacagctacaaagagagtatggagaagtca
acctcaaccccagggaaggattcagatgacacggaaaaagaaaaatccacagactcacag
cggccctctaagtcatcggcctccatctctgcttcggggacttccacatgtgaggcaact
ggcaaccaggaaacaaataaaatgactgacagtggtgggctgagagctgcactactggat
gacgacgacgacgacgacgacgacgacgatgatgacgacgacgatgaagatggtgcagag
ttcaccaacccgtcttgcttcaatgtcacactattagactggatcaatgtgcaagaccga
cccaatgatgtggaatcggttgtgaggaaatgctttgactccatcaataggctcgaccct
cgggtcattcaacccttcctgacagattgtcgtgacacaatttccaaactagataatcaa
aacatgaaagccatcaaggggctcgaggacaggttgtatgctcttgaccaaatgattgca
agctgtaagaagttggtgaatgaacagaaagaacttgctcagggatttctggccaatcag
aagcgtgctgaaaacctgaaggatacatctgttctgcctgatttgtgtctgagtcacacc
aaccagctgatgatcatgctgaacaaccacaggaagctgctagacatcaaaaagaagtgc
accactgccaaacaagaacttgcaaacaaccttcaagtcagacttaaatggtgctgctac
gtgatgcttcatgcagaccaggatggggagaagcttcaggctctactcagacttctgacg
gagctaatagaaagagtgagggtggttgaggccctcagcactgtgccccagatgtactgc
ttggcagtggtggaagtcgtcaggcgaaaaatgtttatgcggcactacagagagtgggcc
tatgcgcttgtgaaggacgggaaacgactgtacgaggcggagaagttcaaaagggaatcc
tttggtaaactcttcaggaagtcttttctcagaaatcgtttgtttagaggactcgattca
tggcctccaacatcgttttgtacacgaaagcccagaaggtttgatgacgaacttccagac
atctcccttgatgacctgcagtacttgaaatcttgttgtcctctcgaggtgcagcctttc
ctgatggttcccacaatgtgtgactttgagcccttaaatcgccacgtagagacgcttcac
aagctggtccaagcggcacaaagtgtggatgagatgtctcaaactattactgacctgcta
agtgaacaacggatatcctttagtcagagatcaagcatgttgatcccagagtctggaagc
atacccgggaccacgacgccgaggtccccaaaaaccccgtcctccctcagcctgcagggc
cccagctgtcagccactacacgttcccgtcccagcaccgcttgaggatctatccccagac
agcatagacgcgcaaacatttgactttgaaacgatcggccacccgaacatggatcccgtc
ctgcagcagggctccctcgacttggattctctagtagagagccctgaatctgacttcatg
tccgcggtcaacgagtttgtgattgaagagaacttaacctctccgaaccccatcagtgac
cccattagccctgaaatgatggtggagtcgctgtattcgtcagtcattaacgctattgac
aacaagcgcatgcaggataccacaatactagagagggagaactcgaggatcactgtgcta
aaacaagtggccgacaagtaccgatcggctgcagaggagtcccattcaaacttcagaagt
gtaaaggatgacctccatcacttgagaggcatggttttaaaagaacaacatgactttggc
tttgttttaagaaatttgaccacagaggtgagcaacattgtggacagcatctgccaaacc
cagaaactggaactaaaggatcagcatcaaagtgagcttctctcccttcggcaagagcta
gagaagcaggttcagacactaacggaggaaaaccaagtaaaccagaatattgtcagagat
gtccagcacgcaatgctggagctggaggggctcatggagcgcaaagagaaagaactcact
cagctcgagaatgagaaagagcaatgtgccgtaacgaagagtaaccagacggagaggatc
aaaaacctggagcagatgatgagtgatcaaaccgaggagatcaagacgctctcagcttca
agagactccctgaccaaccaacttgaaaatctacacgttgagatcgaacgtggccagcag
aagatccgccaggagttggaagttgttgagcagtctcacttaaaagagatggaggaaaaa
atgaagcaggatcatacggcaaaattggagaatcttaccaaggttaaccaggaggctctg
gaacatctatctgcggaaaatagtgcaaagttaagtgaggcagctgaacaccacactgcc
gcactcaaagaaaaggaaaaccaaatgaaggacttggaggcccgtgttactgagcttgca
gaactccgctgcaaagtagaggtggagttagccttcaaagagtcagagacggaagagttg
aggctcttatttgaggaggccaagatgcagcaggccgagacggtgaagtcccaggtggag
gctgcgaccaaagtcctgagcgaagagctggcggatgtcaaagaacggcttcatgtgaaa
aatgatgagtacgaagtggacctcgcagagctgaggagtctcatgaggcttgagaaagac
cactgcatctcagagctggtgaacatacacgaggaagaggctattttgttgcggaacgag
ctcatctccgtgcagcggcaagtccaggacgctgataagaaccacgccgaacagcagcag
aaacttgagcaggcttttgagcagcaagcggcagctctgaatgaggaaaaagaaaagcgg
ttcaggagtttccaggaactggagcaagaattgaggactgttatcagcaatttgctgaca
gacaacgatctgctctccaaaaaaatagagcaggacagacaagcaaccgagagagacttc
gaaaaagaagtgaccttgcaggttacgtcaccagatgctttgacagagttggagcagcag
aaggaggacatggagaagagactgttggacaaaattagacatctcgaggatgagcttcat
tgcaggcaatcctcaaaaagtgatgaagggttgccgctgcatgccgagggccgtgcagat
gccggagcgcctctgtctctcgactcggccctacaggagcggttgcagcaggagagggcc
tgcctgcagtcccagatggacctcctggagaagaagaagaacgaggagatgcaaaacctc
aagacatcgctaatcgcggagcagcagactaatttcaatactgttctaacccgagagaag
ctgaagaaagaacaaatcattaatgatctaacagagaagtggcggaaagtcacacagcag
caggagaaggacaaagctctgatcgagacgctctccgaggaccgagctagcgtcatgcag
gagaagaagcacttggaagaagagctgaaccgcctgcgcagcaccgcactggtctcgtct
tccttcttctctccgaacccctcaggtcaggagatctcagaagctgcagccgcagcagct
cgagctctgccgctcgttggggctttttcctccgagcccatgggtgaaaccgaccgactg
gcctctgtggcggccattcgagaggacgaacaggtggattcagcagtggaagccagcatg
gtggcagtccatgacaacctcctgatgtcagaggagaaacagcggatactcttactcgag
aggactttacacatgaaggaagaagaaaacaagcgcctcagtcaaagactgatgtctcag
agcatgtcgtcagtgtcgtcacggcattcagacaaaatcgccatcagagatttccaggtt
ggcgatttggttctaatcatcctggatgaaaggcacgacaactacgtgctgttcacagtt
ggtcccaccctctacttcctccactcagagtctctcactgcactggacctcaaaccagca
tcagggacctcaagacgaccgtgggtacttggaaaggtgatggagaaggaatattgccaa
gcaaaaaaggcacagaacaggttcaaggttcctttaggaaccaagttctacagagtgaaa
gctgttccatggaacagaaaagtataa
DBGET
integrated database retrieval system
