Clinocottus analis (woolly sculpin): 137804778
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Entry
137804778 CDS
T10471
Symbol
runx1
Name
(RefSeq) runt-related transcription factor 1
KO
K08367
runt-related transcription factor 1
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
137804778 (runx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cana03000
]
137804778 (runx1)
Transcription factors [BR:
cana03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
137804778 (runx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Runt
RunxI
Motif
Other DBs
NCBI-GeneID:
137804778
NCBI-ProteinID:
XP_068460258
LinkDB
All DBs
Position
Unknown
AA seq
473 aa
AA seq
DB search
MVFLWDAKYDPAPGRRYTPPSTTLASGGKMAEALPLGTQEPGGAALLGKLRMAERGMLEV
VSDHPGELVKTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDTPDGTLVTVMAGNDENFS
AELRNATAAMKNQVARFNDLRFVGRSGRGKSFSLTITVFTNPPQVATYQRAIKITVDGPR
EPRRHRQKMDEVKPGSLAFSERLTELEQLRRSSMRVTPPHHHHHHHHQHSANTRQSAGLN
SATFSSPAHAQITADSRPMQPSPSWSYEQSYPYLGQIAPPTVHTANPLSPGRSSLSPDLA
AFGDPRMTLERPFTSLPDSRFSDPRVHYPSSATAFTYTPSHNAVSNGALGITMATAMATT
PAGRYHTYLPPPYPANAPHQAQNGPFQSTSSPYHLYYSTAAGSYQFSMMAGGGGSDSRSP
PRILPPCTNASTGSSLLHPSLPNQNEGVGVEVESSHSSSPTNMAAAEAVWRPY
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggtgtttctgtgggacgccaaatacgaccccgccccgggtcggagatacacccccccc
tccaccacgctggcctcggggggcaagatggccgaggccctgccgctgggcacccaggag
cctggaggcgccgccctgctggggaagctgcggatggcggagcgcggcatgctggaggtg
gtctcggatcatccgggggagctggtgaagaccgacagccccaacttcctgtgctcggtg
ctgcccacgcactggaggtgcaacaagacgctgcccatcgccttcaaggtggttgccctg
ggcgacaccccggatggcaccttggtgacggtgatggccggaaatgacgaaaacttctca
gctgagctgcgcaacgccaccgccgccatgaagaaccaggtggcccgcttcaacgacctg
cgctttgtgggccgcagcggacgaggaaagagcttctctctcaccatcaccgtgttcacc
aaccctcctcaggtggccacgtaccagagagccattaagatcacagtggacggacctcgg
gagccacggcgtcatcgtcagaagatggatgaagtcaaacccggctccctggctttctcc
gagaggctgacagagctggagcagctgagacgcagctccatgagggtgacgcctcctcac
catcatcatcatcatcatcatcaacactccgctaacacccgccaatctgcaggactcaac
tctgccaccttctccagccctgcacatgctcagataactgctgactccagacccatgcag
ccgtctccatcctggtcctatgagcagtcctacccctacctggggcagatagccccgccc
acagtccacacagccaatccactttcccctggtcgctcatcgctcagtcccgacctcgca
gcctttggcgaccccaggatgaccttagaacgacctttcacctccttgcctgactctcgc
ttctccgacccccgggtccactacccttcctctgcaaccgccttcacctacacgccctct
cacaacgccgtctctaacggcgccctcggcatcaccatggccacagccatggcgaccact
ccagcagggcggtaccacacctacctgcctccgccctacccggccaacgccccgcaccag
gctcagaacgggccctttcagtccacctcctcgccgtatcacctgtactactccaccgcc
gccggctcctaccagttctccatgatggccggcggcggcggcagtgactctcgctccccg
ccgaggatcctgccgccgtgcaccaacgcctccacaggttcctccctcctgcacccctct
ttgcccaatcagaatgaaggtgtgggtgtagaggtggagtcgagccacagcagctccccg
acaaacatggcagctgctgaggcggtctggaggccttactga
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