Clinocottus analis (woolly sculpin): 137804804
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Entry
137804804 CDS
T10471
Symbol
abca1b
Name
(RefSeq) phospholipid-transporting ATPase ABCA1b isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana02010
ABC transporters
cana04148
Efferocytosis
Brite
Transporters [BR:
cana02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
137804804 (abca1b)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
137804804
NCBI-ProteinID:
XP_068460296
LinkDB
All DBs
Position
Unknown
AA seq
2242 aa
AA seq
DB search
MPSAGTLPWLQGILCNANNPCFRSPTPGESPGVVGNFNDSIISRLFSDAKKILLYSQNDR
NLDGFKELALALKALQKSRSGFKLHHFLRDQESLSDFLLTNASLSQHDVQQIRDADVDLE
QVVLRGFGVHLRDLCPRKGGKRSAKDFVTIADQRVSMLVQEVLCQALPTWLDRAEEHFLN
NLDFLKPIQRDMRSDPEAIKLVARATNNLLDSLGSLAVELAGMKSWINLRTELVFLTQNA
TSSPSTMYQAVSRIVCGHPEGGGLQIKSLNWYEDSNYKALFGNQNSSEDESTSLYDNSST
PYCNSLVKNMDSNPMSRMIWTALKPLLMGKILYTPHTPATQRVIHEVNRTFQELGVFRDL
GGMWEEMRPKVWNFMENSEQMDVIRTLLKNNATARFFHGQLTETDWTVDDVSNFLSKQET
PYPGSLTWRQVFNETDQAVMSISRFMECVNLDKLEPVSTEEALVNQSMVLLEDRKFWAGI
VFPDIDPNTTELPAKLNYKIRMDIDNVERTNKIKDAYWDPGPRADPFEDMRYIWGGFSYL
QDVIEQGIIRAVTGTKEKTGVYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMFSVAIIL
KSVVYEKEARLKETMRIMGLNNGILWFSWFISCLIPLLVSAGLLVLLLKKGDLLPYSDPG
VVFLFLGSFAVVTIMQCFLLSTAFARANLAAACGGIIYFTLYLPYVLCVAWQDYIGFTGK
VFASILSPVAFGFGCEYFALFEEQGVGIQWKNLVSSPLEEDDFSLRTAIVMMYFDSFLYG
VLTWYIEAVFPGQYGIPRLWYFPFTKAYWFGEKEGKSNKVPMSRKENPEAVCIEEEPAHL
EPGVYIENLVKVYRHGKKLAVDGLTLGFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSG
TAYILGRDIRNELSAIRQSLGVCPQHNVLFSMLTVEEHIWFYGRLKGLSEQRVKAEIEQI
LQDTGLPHKRSCRSSALSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPFARRGIWDLLL
KYRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLYLKNQLGTGYYLTLVKREPD
LSSCRTSSSTGSLTKKEEESTSVSSSDAGLGSDPESEAATIGGLIPASRPPSSEPGPAAS
VCGAPFVPPDVSLVSGLIVGHVPAARLVEDLGHELTYVLPYSAAKDGAFVELFRDLDLKL
PELGISSYGVSDTTLEEIFLKVAEDNGVDTEVPSDGTLPVRRRRRTHAFGGGDHQSCLRP
LTEDDNNDCNESDGDPECRDTDWLNCTEGKGSYQVKGWSLKRQQFVALMWKRFLHARRSR
KGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLELQPWMYEDQVTFISDDAPGDGNMQKL
LSALLDAPGLGTRCMDGHPIPEAPCTMGDEDWMTPDVPESLQQLFSSTNWTMEDPSPACF
CSCDSKKKMLPECPAGAGGLPPPEMKLSVNDTLQNLTGRNISDYLVKTYAQIIGKSLKNK
VWVNEFRYGGFSLGARSTQVLPPANEIDDAIERVRKIFELQKGAAADRFLDSLSSFINGL
DTKNNVKIWFNNKGWHSIGAFINVMNNGILRANLPEGSDPNRYGIRAFNHPLNLTKEQLS
QVALVTTSVDVLVSICVIFAMSFVPASFVVFLIQERVSKAKHMQFISGVQPLLYWVANFI
WDMCNYVVPATLVIIIFICFQQQAYVSSTNLPVLALLLLLYGWSITPLMYPASFFFQIPS
TAYVVLTSVNILIGINGSISTFVMELFGNNEIGGINDILKNVLLIFPHFCLGRGLIDMVK
NQAMADALERFGENRLRSPLEWDMVGKNLFAMAVEGVVFFIITVLIQYRFFIKPRSVSKL
TKLGPLGEEDEDVARERQRIVHGLGHGDILELRQLTKVFKRKQKPAVDRLCVGIPPGECF
GLLGVNGAGKTTTFKMLTGDTLVTSGEAFLAGKSILREMSSVQVLMGYCPQFDSINELLT
GREHLELYAVLRGVPEDQVCEVADWGIRKLGLMKYAEKAAGSYSGGNMRKLSTAMALIGA
PPVVFLDEPTTGMDPKARRALWNCIHSIIKEGRSVVLTSHSMEECEALCTRMAIMVNGRF
RCLGSVQHLKNRFGDGYTIILRVGGPDADLLPVMKFIESELSGSTLKEKHRNMLQYQLPS
SLTCLTHIFSILAKNKDLLRIEDYSVTQTTLDQVFVNFAKDQSDDYHSKDSVRRRDVAIE
VPAPSDSRGGAEGGDAQKESVM
NT seq
6729 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcggccggcacgctgccgtggctccagggcatcctctgcaacgccaacaacccg
tgcttcaggagcccgacgccgggcgagtccccgggcgtcgtcggcaacttcaacgactcc
ataatttctcgtctgttttcggacgccaagaagattcttctgtacagtcagaacgataga
aacctggatggattcaaggagctcgcgctggctctcaaggcgctgcagaagagccgatca
gggttcaagctgcatcacttcctgcgggaccaggagagtctgtctgacttcctgctgacg
aacgcctcgctgtctcaacacgacgtccagcagatccgagacgccgacgtggacctggag
caggtcgtcctgcgaggcttcggtgtccacctgagggacttgtgtcccaggaaggggggc
aagcggagcgcgaaggactttgtgacgatcgcggaccagcgggtgtcgatgctggtccag
gaagtcctctgccaggcgctgcccacctggctggaccgcgccgaggagcacttcctaaac
aacctggacttcctgaaacccatccagagggacatgaggtccgaccccgaggccattaaa
ctggtggccagagcgaccaacaacctcctggacagtctgggttcactggcggtcgagctg
gccgggatgaagagctggatcaacttgaggacggagctcgtgttcctgacccagaacgcc
acgtcgtcccccagcaccatgtaccaggccgtgtcccgcatcgtgtgcggtcaccccgaa
ggcggcggcctgcagatcaagtccctcaactggtacgaggacagcaactacaaggccctg
ttcggcaaccagaacagcagcgaggacgagtccacgtcgctgtacgacaattcgtccacc
ccgtactgcaacagtctggtgaagaacatggactccaaccccatgtcccgcatgatctgg
acggccctgaagccgctgctgatgggcaagatcctgtacaccccccacacccccgccacc
cagagggtcatccacgaggtaaaccggaccttccaggagcttggtgtgttcagggacctg
ggcgggatgtgggaggagatgagacccaaagtctggaacttcatggagaacagcgagcag
atggacgtgatccggactctgctgaagaacaacgccaccgccagattcttccacggccag
ctgaccgagaccgactggaccgtagacgacgtctccaacttcctgtccaagcaggagacc
ccgtaccccggcagcctcacctggaggcaggtgttcaatgagactgaccaggccgtcatg
agcatctcccgcttcatggagtgtgtgaacctggacaaactggagccagtctcgaccgag
gaggcactggtcaaccagtccatggtgctgctggaggacaggaagttctgggcggggatc
gtgttcccggatatcgacccaaacaccaccgagctgccggccaaactcaactacaagatc
cgcatggacatcgacaacgtggagaggaccaacaagatcaaagacgcgtactgggacccg
ggtccccgtgctgacccgtttgaggacatgcggtacatctggggcgggttctcatacctg
caggatgttattgagcaaggcatcatccgagcagtgacgggtaccaaggagaagacgggc
gtctacatccagcagatgccttacccctgctacgtggacgacatcttcctgcgggtgatg
agccgctccatgcctctcttcatgactctggcatggatgttctcggtggcgatcatcctg
aagagtgtggtgtacgagaaggaggctcggttgaaggagaccatgaggatcatgggcctg
aacaacggcatcttgtggttcagctggttcatcagctgcctgattcctctgctggtcagc
gccggcctgctggtgctgttgctgaagaagggggacctgctgccgtacagcgaccctggt
gtggtcttcctgttcctgggctcctttgccgtggtgaccatcatgcagtgcttcctgctc
agcacggcgttcgcccgcgctaacctggccgccgcgtgcggaggcatcatctacttcacg
ctctacctgccctacgtgctctgcgtggcctggcaggactacatcggcttcacgggcaaa
gtctttgctagcatcctgtcccccgtggcgttcgggttcggctgcgagtacttcgccctg
tttgaggagcagggagtcggcatccagtggaagaacctggtgtccagtccactggaggag
gacgactttagcctgcgcaccgccatcgtcatgatgtacttcgactccttcctgtacgga
gtgctcacctggtacatcgaggccgtgttcccaggtcagtacgggatccctcgactgtgg
tatttccccttcaccaaggcctactggttcggagagaaagaagggaagtccaacaaagtc
cccatgagccggaaggagaacccagaggcggtgtgcatcgaggaggagccggctcacctg
gagcccggagtctacatcgagaacctggtgaaggtctatcggcacgggaagaagctggcg
gtggacgggctgacgctcggcttctatgagggacaaatcacctccttcctgggacacaac
ggagccgggaaaaccaccaccatgtccatcctgaccggcctgttcccccccacatccggc
accgcctacatcctcggcagagacatccggaatgagctgagtgccatcagacagagtctg
ggagtctgtcctcaacacaacgtcctcttcagcatgctgacggtggaggagcacatctgg
ttctacggccggctcaaaggcctgtcggagcagcgggtgaaagctgagatcgagcagatc
ctgcaggacacgggcctgccgcacaagcgcagctgcaggtccagcgcgctgtccggcggc
atgcagaggaagctgtccgtggcgctggccttcgtgggggggtcgaaggtcgtgatcctg
gacgaacccacggccggcgtggaccccttcgcccgccgagggatctgggacctgctgctg
aagtaccgccagggccggaccatcatcctgtccacgcaccacatggacgaggccgacatc
ctgggagaccgcatcgccatcatctcccacgggaagctgtgctgcgtgggctcgtccctg
tacctgaagaaccagctgggcaccggctactacctgacgctggtgaagagggagccagac
ctcagctcctgcaggacctcgtccagcaccgggtccttaaccaagaaggaggaggagagt
acttcggtgagcagcagtgacgccggcctcggcagcgatcctgagagtgaggcagcgacc
atcggcggtctgatccctgcctctcgtcccccgtcctcagaacccggcccggcggcgtcg
gtctgcggcgcccccttcgtgccccccgacgtgtccctggtctcgggtctgatcgtgggc
cacgtgcccgccgcccgcctggtggaggacctgggccacgagctcacctacgtgctgccc
tacagcgccgccaaggacggggccttcgtggagctcttcagggacctggacctcaagctg
cccgagctcggcatctccagctacggcgtgtcggacaccacgctggaggagattttcctg
aaagtggctgaagacaacggagtcgacactgaagtgccttcagatggtacacttcctgtc
cggaggcggaggaggactcacgccttcggtggaggagaccatcagagttgtctgagacct
ttaacagaggacgacaacaacgactgcaacgagtctgatggagatcctgagtgccgggat
acggactggttgaactgtacggagggtaaaggctcgtaccaggtgaaaggttggagtctg
aagaggcagcagtttgtagctctgatgtggaaacggtttctgcacgctcgacgctccagg
aagggcttcttcgctcagatcgtcctcccggcggtgttcgtgtgcatcgctctggtcttc
agtctcatcgtcccccctttcggaaaatatcccagtctggagctgcagccctggatgtac
gaggaccaggtcaccttcatcagtgatgacgctcctggagatggcaacatgcagaagttg
ttgagcgctctgctggacgctccgggcctcgggactcgctgcatggacggacatcccatc
ccagaggctccctgtacgatgggggacgaggactggatgactcctgatgtccctgaaagc
ctccagcagctcttcagttccaccaactggaccatggaggatccgtctccggcctgcttc
tgcagctgcgacagcaagaagaagatgctgcccgagtgcccggccggagccggcggactg
ccgccccctgagatgaagctgagcgtcaacgacacgctgcagaacctgacgggaaggaac
atctcagactacctggtgaagacgtacgctcagatcatcggcaagagtctgaagaacaag
gtttgggtgaacgagttcaggtatggaggcttctcattgggcgccaggagcactcaggtc
ctcccaccggccaatgagatcgatgacgccatcgaacgagtcagaaagatctttgagctc
cagaagggagcggcagcagatcgattcctcgacagtctgtcgagcttcatcaacggtttg
gacacaaagaacaacgtgaagatctggttcaacaacaaaggctggcacagcatcggagcc
ttcatcaacgtgatgaacaacggcatcctgagggccaacctgccggagggcagcgacccc
aaccggtacggcatcagagccttcaaccacccgctgaacctcaccaaggagcagctgtct
caggtggctctggtcacgacctccgtggacgtcctggtgtccatctgcgtgatcttcgcc
atgtccttcgtcccggccagcttcgtggtcttcctcatccaggagcgcgtcagtaaagcc
aaacacatgcagttcatcagcggcgtgcagccgctgctctactgggtggccaacttcatc
tgggacatgtgcaactacgtcgtcccggctacgctggtcatcatcatcttcatctgtttc
caacaacaagcctacgtgtcgtccaccaacctgccggtgctcgctctgctgctgctgctc
tacggctggtccatcacccccctcatgtacccggcctccttcttcttccagatccccagc
acggcctacgtggtgctcaccagcgtcaacatcctcatcggcatcaacggcagcatctcc
accttcgtcatggagctgttcggcaacaacgagatcgggggaatcaacgacatcctgaag
aacgtcctgctcatcttccctcacttctgtctcggtcgaggactcatcgacatggtgaag
aaccaggcgatggccgacgccctcgagagatttggtgagaaccggctgcgctcccctctg
gagtgggacatggtgggaaagaacctgttcgccatggccgtggagggagtggtgttcttc
atcatcaccgtcctcatccagtacaggttcttcatcaaacccaggtcggtcagtaaactc
accaaactgggaccactgggagaggaagacgaggacgtggcccgagagagacagaggatc
gtccacggcctgggacacggagacatcctggagctgagacagctcaccaaggtgtttaag
cggaaacaaaagccggcggtggatcgactgtgtgtcgggattccacctggagagtgcttc
gggctgctcggggtgaacggagctggaaagacgacgaccttcaagatgctgacgggggac
acgctggtgaccagcggggaggccttcctggccgggaagagcatcctgagggagatgtcc
tcggtccaggtgctcatgggctactgcccccagtttgactccatcaacgagctgctgaca
ggaagagaacacctggagctgtacgccgtcctcaggggggtcccggaggaccaggtctgt
gaggtggcagactggggcatcaggaagttgggtctgatgaagtacgctgagaaagcagca
ggaagttacagcggaggaaacatgaggaagctttctacggccatggctctgatcggagcg
ccgcccgtcgtgttcctggacgagcccaccactggcatggaccccaaagcccggcgggcc
ctctggaactgcatccacagcatcatcaaggagggacgctcggtggtcctcacctcccac
agcatggaggagtgtgaggctctgtgcaccaggatggccatcatggtgaacggcaggttc
agatgtctcggcagcgtccaacacctgaagaacaggttcggggacggctacaccatcatc
ctgcgcgtgggcgggccggacgccgacctgctgcccgtcatgaagttcatcgagagcgag
ctgagcggcagcacgctgaaggagaagcaccgcaacatgctgcagtaccagctgccctcc
tcgctcacctgcctcacacacatcttctccatcctcgccaagaacaaggacctgctgagg
atcgaggactactctgtcacccagaccaccctggaccaggtgttcgtgaactttgcgaag
gaccagagtgacgactatcactccaaagactcggtgcggcgccgagacgtcgccatcgag
gttcccgcgccgagcgacagccgaggaggcgccgagggcggggacgcgcagaaggaaagc
gtcatgtga
DBGET
integrated database retrieval system
