Clinocottus analis (woolly sculpin): 137804842
Help
Entry
137804842 CDS
T10471
Symbol
cacna1ab
Name
(RefSeq) calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, b isoform X1
KO
K04344
voltage-dependent calcium channel P/Q type alpha-1A
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04010
MAPK signaling pathway
cana04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
137804842 (cacna1ab)
04020 Calcium signaling pathway
137804842 (cacna1ab)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cana04040
]
137804842 (cacna1ab)
Ion channels [BR:
cana04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
137804842 (cacna1ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
137804842
NCBI-ProteinID:
XP_068460356
LinkDB
All DBs
Position
Unknown
AA seq
2350 aa
AA seq
DB search
MILTTIIANCIVLALEQHLPDGDKTPLSERLEETEPYFIAIFCLEGGIKILALGFALHKG
SYLRNGWNVMDFVVVLTGILSSVGSQLDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKA
MIPLLQIGLLLFVAILMFAIIGLEFYMGKFHTTCFDKVTGEVADVLPCGTELPSRLCPNG
TKCAGRWIGPNYGITQFDNILFAVLTVFQCITMEGWTDMLYYSNDVEGSAWNWMYYIPLI
IIGSFFMLNLVLGVLSGEFAKERERVENRSEFLKLRRQQQIERELNGYLEWICKAEEVIL
AEEDGTVNFDGSRRRPTIKTKNNKTELLNPEEGEDNMGDAVGFARSSIKNGKDGSAYNKR
ERRLRFFIRKIVKTQAFYWTVLCLVGLNTMCVAAVHYNQPEVLSDFLFYAEFIFLGLFMS
EMCIKMYGLGIQPYLHSSFNCFDCVVIVGSIFEVVWATIKPGTSFGISVLRALRLLRIFK
VTKYWAPLRNLVVSLLNSMKSIVSLLFLLFLFIVVFALLGMQLFGGQFNFDKGTPPTNFD
TFAAAIMTVFQVLTGEDWNMVMYDGIESQGGVNDKGMVFSIFFIVLTLFGNYTLLNVFLA
IAVDNLANAQELTKDEEDQEAAANQKTAMQKAKEVAEVSPLSAANLSIAAKEQQKNNIKG
SKSVWEQRTSEIRRQNLMTSREALYNELEQEEWKVGGEGEEVSFPRKPRGDMKTHLDRPL
VVNPQDNRNNNTNKTPPGELPLDQEYRRQDIDHHRRRAAHHSHSHSHHRHRKANGPDGGG
EAGQPLETRMERGFSCTSLGNTAEAQQGEERHGHRSHRGHRHRSNREARSASPHSAGAAA
AEGEHRRSRQQRGEGEEGKRHRSKGTEAEKGEEEGGGGGAGGEGRKARRHRHGTQERSRG
HRPRREHHSTGPSLSTARPVQQHNEDLDNFRNNSKLAGARELPYGLLPPDRHPEHVNNLL
NRRDADTLTLIHSMDSLILTSMAKPEYTKIDMPPVYPYPSTNAILQVNKNANTDQKKNEE
KKEEEDEGGDEDGPKPMPPFSSCFVLSTTNPFRRCCHYILTLKYFEFSILSVIAMSSIAL
AAEDPVSPESPRNNVLRYFDYVFTGVFTFEMLIKMVVLGLFLHQGSYFRDLWNILDFIVV
SGALVAFAFTGSSKGKDISTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNIL
IVYMLFMFIFAVVAVQLFKGRFFFCTDESKEFERDCRGEYLVYERDEVKAQKREWKKYDF
HYDNVAWALLTLFTVSTGEGWPQVLKHSVDSTYENQGPSPGYRMEMSIFYVVYFVVFPFF
FVNIFVALIIITFQEQGDKMMEDYSLEKNERACIDFAINARPLTRHMPKNKMSFQYRMWQ
FVVSPPFEYSIMALIALNTIVLMMKFDGASKTYDEVLKNLNIVFTTFFFLESVLKVIAFG
PLNFFKDAWNIFDFVSVLGSVTDILVTELGNNFINLSFLRLFRAARLIKLLRQGETIRIL
LWTFVQSFKALPYVCLLIAMLFFIYAIIGMQLFGNLNLDEEGDSAINEHNNFRTFIMALM
LLFRSATGEAWHDIMLACLGGKECDPASGNTEPECGSTFAYTYFVSFIFLCSFLMLNLFV
AVIMDNFEYLTRDSSILGPHHLDEYVRIWAEYDPAACGRIHYKDMYSLLRVISPPLGLGK
KCPHRVACKRLLRMDLPVADDNSVHFNSTLMALIRTALDIKIAKGGADKHQMDAELRKEM
MAIWPNLSQKTLDLLVTPHKAATDLTVGKIYAAMMIMEYYRQSKTKKLQALREEQNRTPL
MFQRMEPPSEGGGMDGQGGQGLNGLPSTQPDNPNSLPPEGGMTESQSWVTAKAQEMFQKT
GNWSPDRPYPDDLHDNRHNPQTVEMREMGRDGYSDTEPCHPMDGHGRTLSMPRLSADNQR
AHAVSRRRHRPRGNNLSTITDTSPMRRSTSSLVHGRTGRGVRLDDYSLERVVSEEGRHGG
GRRHRDRSHRASQRSLTRYTDADTGLGTDLSTTTQSGDLPPKERERDRGRTKDRRHHHHH
HHHHHSSSMDKERYGHDRHDYPHRPAAHDRHWSRSPSEGPDGRGHRQGSSSVSGSPVPST
SGTSTPRRGRRQLPQTPAVPRPHVTYSPAVRKPGYGPPGPGRLRSPSPRQFSPPDHERGF
HQRPPSRQASPHPGGGGPPSSRHGSPRSPRHQSPRSPLHGSSSSPRSPHRGRWSGPPPGD
GPEGDGPFYERDYEYERHHEPPAYEQSLSHGNPHPHGGNPHPLPRSPRTAPRHGHPHPPP
PPAPHPHPHPRRVPNGYRSSSPSPHRRGVPPGGPMPPPPLHPHHRPPPHDRGPRKGLHEP
FSETDEDDWC
NT seq
7053 nt
NT seq
+upstream
nt +downstream
nt
atgattctcaccaccatcattgcaaactgcatcgttctggctctggagcagcacctccct
gacggagacaagacgcctctctctgaacgactggaggagacggagccctacttcatcgcc
atcttctgcttggagggcggcatcaagatcctggctctgggcttcgcgctgcacaaaggc
tcctacctgaggaacggctggaacgtcatggacttcgtggtcgtgctcaccggtattttg
tcgtcggtgggctcgcagctcgacctgaggacgctccgagccgtcagagtgctacgacca
ctgaagctggtttctgggattcccagcctgcaggtggtgctgaagtccatcatgaaggcg
atgatccccctgctgcagatcggcctgctgctgttcgtggccatcctcatgttcgccatc
atcggcctggagttctacatggggaagttccacaccacctgcttcgacaaggtcacggga
gaggtcgcggacgtgttgccgtgcggcacagagttgccgtcgcggttgtgtcccaacggc
acaaagtgcgcgggtcgctggatcggaccgaactacggcatcacgcagttcgacaacatc
ctgttcgccgtgctcaccgtcttccagtgcatcaccatggagggatggacggacatgctg
tactacagcaacgacgtggagggcagcgcctggaactggatgtactacatccccctcatc
atcatcggctccttcttcatgctcaacctggtgctgggcgtgctctcaggggaatttgcc
aaagagagagagcgagtggagaacaggagcgagttcctcaagctgaggaggcagcagcag
atagagagagagctcaacggatacctggagtggatctgcaaagcagaagaggtgatttta
gcggaggaggacggcacagtgaactttgatggttcgaggcgacggccgaccatcaaaacc
aaaaacaacaagacggagctgctgaaccccgaagaaggagaagacaacatgggcgacgca
gtaggtttcgctcgctccagcattaaaaacgggaaagatggctccgcctacaacaagagg
gagcgccggctgcggttcttcatccgcaagatcgtgaagactcaggccttctactggacg
gtgctctgcctggtggggctgaacaccatgtgtgtggccgccgtgcactacaaccagccg
gaggtgctgtccgacttcctcttctatgcagagtttatcttcctgggtttgttcatgtct
gagatgtgtatcaagatgtacggtctgggcatccagccctacctccactcctccttcaac
tgcttcgactgtgtggtcattgtgggcagcatcttcgaggtggtgtgggcgaccatcaaa
ccaggaacctccttcggcatcagtgtgttacgagctctgagactgctccgcatcttcaaa
gtcaccaagtactgggctcctctcagaaacctggtggtttctctgctgaactccatgaag
tccatcgtgagcttgctgttcctcctcttcctcttcatcgtggtcttcgccctgttgggc
atgcagctgtttggaggacagtttaacttcgacaaaggaacgcctccgaccaactttgac
acgttcgcagcagcgattatgacggtgttccaggtcctgaccggtgaggactggaacatg
gtgatgtacgacggcatcgagtctcagggaggagtgaacgacaaagggatggtgttctcc
atcttcttcatcgtcctcaccctcttcggcaactacactctgcttaacgtgttcttggcc
atcgccgtcgacaatctggccaacgcccaggagctcaccaaggacgaggaggatcaggag
gcggcggccaatcagaagacggcgatgcagaaggcgaaagaggtcgccgaggtcagcccg
ctgtcagcagccaacctgtccatcgccgccaaagagcagcagaagaacaacatcaagggc
agcaagtcggtgtgggagcagaggaccagcgagatccgccggcagaacctgatgacgagc
cgcgaggcgctctacaacgagctggagcaagaggagtggaaggtgggaggcgaaggggag
gaggtgtccttcccacgaaagccccgcggtgacatgaagacccacctggaccggccgctg
gtggtcaacccgcaggacaaccgcaacaacaacaccaacaagacgccgccgggcgagctg
cccctggaccaggagtaccggcgccaggacatcgaccaccaccggcgccgagccgcccac
cactcccactcccactcccaccaccggcaccggaaagccaacgggccggacggcggcggg
gaggcgggccagcccttggagacccgcatggagcgcggcttcagctgcacgtccctgggc
aacaccgcggaggcccagcagggggaggagcggcacggccaccggagccaccggggccac
cggcaccggagcaaccgggaggcccgcagcgcgtcgccgcacagcgccggggcggcggcg
gcggagggcgagcaccggcggtcccggcagcaacgcggggagggagaggaaggcaagcgg
caccgatccaaggggacggaggcggagaaaggcgaggaagaaggaggaggaggaggagca
ggaggggaggggcgcaaggccagacggcatcgccacggcacccaggagaggagcagaggg
catcggcccagaagggagcaccacagcaccgggcccagcctctccaccgcgcggcccgtc
cagcagcacaacgaggacctggacaacttccgcaacaacagcaagctggccggcgcccgg
gagctgccgtacggcctcctgccgccggaccgccaccccgagcacgtcaacaacctgctg
aaccgccgcgacgccgacaccctcaccctgatccacagcatggacagcctgatcctgacc
agcatggccaagcccgagtacaccaagatagacatgccgcccgtgtacccgtacccgtcc
accaacgccatcctgcaagtgaacaagaacgccaacacggaccagaagaagaacgaggag
aagaaagaggaggaggacgagggcggggacgaggacggccccaagcccatgccgcccttc
agctcctgcttcgtcctgtccaccaccaacccgttccgcaggtgctgccactacatcctg
actctgaagtactttgagttcagcatcctgtccgtcatcgccatgagcagcatcgccctc
gccgccgaggaccccgtctcccccgagtcgccccgaaacaacgtgctgcgttattttgac
tacgttttcacaggcgtcttcacgttcgaaatgttgatcaagatggtggtgctgggcctg
ttcctccatcagggctcctacttccgcgacttgtggaacattctggactttatagtggtt
agtggtgctctggtggccttcgccttcacgggcagcagcaagggcaaagacatcagcacc
atcaagtcgctccgagtgttgagggttctgcgtcctctgaagaccatcaagagactcccc
aagctaaaggcggtgttcgactgcgtggtcaactctctgaagaacgtgctgaacatcttg
atcgtctacatgctcttcatgttcatcttcgccgtggtcgccgtgcagctcttcaaaggt
cgcttcttcttctgcacggacgaatccaaagagtttgagcgggactgcaggggcgagtac
ttggtatatgagagagacgaggttaaagctcagaagcgggagtggaagaagtacgatttc
cactacgacaacgtggcttgggccctgctcaccctcttcactgtctccactggagagggg
tggccgcaggtgttaaagcactcagtggactccacctatgagaatcagggccctagcccg
ggttataggatggagatgtccatcttttacgtggtgtacttcgttgtcttccccttcttc
ttcgtaaacatctttgtggctctcatcatcatcaccttccaggaacagggggataaaatg
atggaggactacagtttagaaaagaatgagagagcctgtatagatttcgccatcaacgct
cggcctctgactcgccacatgccgaagaacaaaatgagttttcagtatcgcatgtggcag
ttcgtggtgtctccgcccttcgagtacagcatcatggctctgattgcactcaacaccatc
gtcctcatgatgaagtttgacggcgcgtcgaagacttacgacgaggtgctgaagaacctc
aacatcgtgtttaccaccttcttcttcttggaatcagtcctgaaggtcatcgctttcggc
cctctgaatttcttcaaagacgcctggaacatttttgattttgtgtccgtcctcgggagc
gtcactgacattttagtgacagaactcgggaacaacttcatcaacctgagcttcctgcgg
ctcttcagggcggctcgcctcatcaagctgctgcggcagggagagaccatccgcatcctg
ctgtggaccttcgtccagtccttcaaggctctgccctatgtgtgcctcctcatcgccatg
ctcttcttcatctacgccatcatcggcatgcagttgtttggtaacctgaacctggacgaa
gagggcgacagcgccatcaacgagcacaacaacttcaggaccttcatcatggccctcatg
ctgctcttcaggagtgcgacgggcgaggcgtggcacgacatcatgctggcttgcctcggc
gggaaggaatgcgacccggcctccgggaacaccgagcccgaatgcggcagcaccttcgcc
tacacctactttgtgtccttcatcttcctctgctccttcctgatgctgaatctgttcgtc
gccgtcatcatggacaactttgagtacctgacccgggactcctccatcctgggcccgcac
cacctggacgagtatgtaaggatctgggccgagtacgacccagccgcctgcgggcgcata
cattataaggatatgtacagtttattgagagttatctcccctcccctgggccttggcaag
aaatgcccccatagggtggcctgcaagaggctgctgcgcatggatctgccggtggcggac
gacaactcggtgcattttaactccaccctcatggctctgatccggacggcactggacata
aagatcgccaagggcggtgcagacaagcaccagatggacgcggagctgaggaaggagatg
atggccatttggcccaacttgtcgcagaagaccctggacctgctggtcacgccgcacaag
gcagccacagacttgacggtgggcaaaatctacgccgccatgatgatcatggagtactac
cggcagagcaagacgaaaaagctgcaggcgctgcgagaggaacagaaccgaacgccatta
atgtttcagcgcatggagccgccctccgagggagggggcatggacggccaggggggccag
ggcctcaacgggctccccagcacgcagccggacaaccccaacagcctacctccagagggt
ggcatgactgagagccagtcgtgggtgacggccaaagcccaggaaatgttccagaagacg
gggaactggagccctgaccgaccgtaccccgacgacctccacgacaaccgtcacaaccca
cagacggtagagatgagggagatggggcgggacgggtactccgacactgagccctgtcac
ccaatggatgggcatgggcggaccctctccatgccccgcctctcggcagacaaccaaaga
gctcatgctgtttcgcggaggagacacaggcctcgtggaaataacctcagtaccatcacc
gacaccagtccgatgcgtcgctccacctccagcctggtccacgggcgaacgggccgcggc
gtgcggctggacgactactccctggagagggtggtgtccgaggaggggaggcacggggga
gggcgcagacaccgggaccggagccaccgggcgtcgcagcgctccctcacccgatacacc
gacgctgacacgggtctgggcacagatctcagcaccaccacgcagtcgggcgacctccca
cccaaggagcgcgagcgtgaccgcggccggaccaaggaccgccgacaccaccaccaccac
caccaccaccaccacagcagctccatggacaaggagcgttacgggcacgacaggcacgac
tacccgcacaggcccgccgcccacgaccgccactggtcccgctcgcccagcgaggggccc
gacggacggggacaccgacagggcagtagctcggtgagcggcagcccggtcccctccact
tcggggaccagcactccgcggagaggccgccggcagctgccccagacccccgccgtcccg
cgcccgcacgtcacctactcccccgccgtccgcaagcccggctacggccccccggggccg
ggccggctgcgctcgccgtccccccgccagttctccccgccggaccatgagcgaggcttc
caccagcggccgccgtcgcgccaggcctcccctcacccgggcggcggcggccccccctcg
tcccggcacggctcgccgcgctccccccggcaccagtcgccgcgctcgcccctccacggc
tcctcctcctcgcccaggtccccccaccggggccgctggagcggacccccgcccggggac
ggcccggagggggacgggcccttctacgagcgcgactacgagtacgagcggcaccacgag
ccgcccgcctacgagcagagcctctcccacggcaacccgcacccgcacgggggcaacccc
cacccgctgccgcgctcgcccaggactgccccccgccacgggcacccgcacccgccgcct
ccgccggcccctcacccgcacccgcacccgcgccgggtgcccaacggctaccgctcgtcc
tcgccttccccgcaccggcgcggggtgccgcccggagggccgatgccgccgccccccttg
cacccgcaccaccggcccccaccccacgaccgagggccccgcaagggcctgcacgaacct
tttagcgagacggacgaggacgactggtgctag
DBGET
integrated database retrieval system
