Clinocottus analis (woolly sculpin): 137804883
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Entry
137804883 CDS
T10471
Symbol
chd5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
cana Clinocottus analis (woolly sculpin)
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cana03036
]
137804883 (chd5)
Chromosome and associated proteins [BR:
cana03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
137804883 (chd5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
PHD
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_CHD1_Hrp3
PHD_2
DEAD
AAA_22
Motif
Other DBs
NCBI-GeneID:
137804883
NCBI-ProteinID:
XP_068460431
LinkDB
All DBs
Position
Unknown
AA seq
2008 aa
AA seq
DB search
MPGSLSNEDEGRDDMDFEDEMPDEDDEGERNTVPLAALDSFFTDSDALKQQQKKKKPKKM
KEGKMPKVKKRKKEGGIQPRADSDPEEAEEAEEERPEAGSESESSAYGPTKKKKKKPREK
KEKKPRKKKRDEEEDEEDEEDGNMKEPKSSGQLMTEWGLEDVQYGFTEDDYTTITNYKAF
SQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGASATAVAAAVAAAVETVTVAQ
PTPVSGGGGQQPCCQLGPVKKAKTKEGKGPGVRKRSKTAKEVKKKAKPKKTKSKSGQSVK
KKKASSSEEDFLEESDFDDISIHSVSVLSDISGAASKKKARRGRKKRKKEDGDGYETDHQ
DYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEAKDEEDEE
EDPVCEEEDDHLEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCMCPP
LKGKVQKILHWTWGEPPLPAEPPDGPDGAPADPLANPPLKGRPEREFFVKWTGLSHWHCS
WVSELQLELYHTVMYRNYQRKNDVDEPPPYDYGSGEEELNNEKRKSKDPQYAAMEERFYR
YGIKPEWMVMHRVINHSFDKDGDVHYLIKWRDLPYDQSTWETDDFDIPDYDSHKATYWDH
REQIIGEDQRPLVVKKGKKVKEDHPKREVPPDAPIIDPTIKFEHQPWYINATGGTLHPYQ
LEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINW
EREFELWAPDFHVVTYTGDKDSRAIIRENEFTFEDSAVKSGRKVFRMKKDTPIKFHVLLT
SYELITIDQAILGSISWACLVVDEAHRLKNNQSKFFRILNGYKIYYKLLLTGTPLQNNLE
ELFHLLNFLTPARFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKVDVFKNMPSKT
ELIVRVELSPMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAV
EAPVSPNGSYDGNQLVKSSGKLTLLQKMLKKLKEEGHRVLIFSQMTKMLDLLEDFMEFES
YKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLASADTVVIYDSDWNP
HNDIQAFSRAHRIGQNRKVMIYRFVTRGSVEERITQVAKRKMMLTHLVVRPGLGSKTGSM
SKQELDDILKFGTEELFKGEMEAAARAMGATGDTKEGEEGNVIHYDDDAISKLLDRSRDA
TEDTEIQNMNEYLSSFKVAQYVVKEEEGEEEVEREIIKQEENVDPDYWEKLLRHHYEQQQ
EDLARNLGKGKRIRKQVNYNDTTQEDQEWQDDLSDNQSEYSVGSEDEDEDFEERPEGGRR
QSRRQMKNEKDKPLPPLLARVGGSIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVR
DLRGKSEREFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKV
QEFEHVNGKLSSPDLIPIGMELKKLTESLSSDPNTPVAASPAATQPGTPVPPEKTESLLS
TAEDKETTEQDGKKPPEQDSSGAEPASVSEKASDGEEMKAGSEEKTADERDRTESPSSKA
EPSANSKESRQTELSSSQTSPKAEPSKDAEKSSEKGDTESPLAKTEDKENKPAAADDLRS
EDALEGRLNGDKDALDEMDESRKEDKNGYKTKFMFNIADGGFTELHTLWQTEERAALSSG
KMHDIWHRRHDYWLLAGIVTHGYARWQDIQNDPRYAILNEPFKTEIHKGNYLEMKNKFLA
RRFKLLEQALVIEEQLRRAAYLNMTQDPGHPAMALNTRFTEVECLAESHQHLSKESLAGN
KPANAVLHKVLNQLEELLSDMKADVTRLPNMLSRIPPVSARLNMSERSILSRLTSRGSEP
PPQQPFLQGAFGCSQMFGGGFGGAFRGPGGQAMVNYSQMPLGPYVSVSSNGPPPPTSHLD
KKSLDSLRDAATPDLKAGKPSDVICIED
NT seq
6027 nt
NT seq
+upstream
nt +downstream
nt
atgccggggtcgctgagcaatgaagacgagggacgagacgacatggattttgaagacgag
atgccagatgaggatgacgaaggcgagcgcaacactgttcccctcgctgcgctcgacagc
ttcttcactgacagcgacgccctcaagcagcagcagaagaagaagaagcccaaaaagatg
aaagaggggaaaatgcccaaagtgaagaagaggaaaaaggagggaggaatccagccccga
gccgacagcgacccggaggaggcggaggaggcggaggaggagcgaccggaggccggctcg
gagagcgagagcagcgcgtacggaccgaccaagaagaagaagaagaaacccagggagaag
aaggagaagaagcccaggaagaagaagagggatgaggaagaggacgaggaggacgaggag
gacgggaacatgaaagaacccaagtcctccggccagctgatgacggagtggggcctggag
gacgttcagtacggcttcaccgaggacgactacaccaccatcaccaactacaaggccttc
agccagttcctcaggcctctcatcgccaagaagaaccctaagatccccatgtccaagatg
atgacagtgttgggggccaagtggcgcgagttcagcgccaacaaccccttcaaaggcgcg
tccgccaccgccgtggccgccgccgtggccgccgccgtggagacggtcaccgtggcgcag
ccgacgcccgtgagcggcggcggcggccagcagccctgctgccagctggggccggtcaag
aaagccaaaaccaaagaggggaaaggaccgggagtcaggaagagaagcaagacggcgaag
gaggtgaagaagaaagccaaacccaagaagaccaaatcaaagtcgggccagagtgtgaag
aagaagaaagcgtcctcgagtgaggaggacttcctggaggagtcagactttgatgacatc
agcatccacagtgtctccgtgctgtctgacatctcaggagccgccagcaagaagaaggcc
cggcgagggcgcaagaagaggaaaaaggaggacggcgacggctacgagacggaccaccag
gactactgcgaggtgtgccagcagggcggcgagatcatcctgtgtgacacctgcccgcga
gcgtaccacctggtctgcctggaccccgagctggagaaggcccccgagggcaaatggagc
tgtccgcactgtgagaaagaggggatccagtgggaggccaaagatgaggaggacgaagag
gaggatcccgtgtgcgaggaagaggacgaccacctggagttctgcagggtgtgtaaagac
ggaggcgagctgctgtgctgcgacacctgcccgtcctcctaccacatccactgcctgaac
ccgccgctgcccgagatccccaacggggagtggctgtgtcctcgctgcatgtgccctcct
ctcaaaggtaaggtccaaaagatcctgcactggacgtggggagaacctccgttgccggca
gaaccgcccgacggccccgacggcgcgccggccgacccgctggccaaccctccgctgaaa
ggccggcccgagagggagttcttcgtgaagtggaccggcctctcgcactggcactgctcc
tgggtcagcgagctgcagctggagctgtaccacaccgtcatgtacaggaactaccagcgc
aagaacgacgtggacgagccgccgccgtacgactacggctccggagaggaggagctgaac
aacgagaagaggaagagcaaagacccgcagtacgccgccatggaggagcgcttctaccgc
tacggcatcaagccggagtggatggtcatgcaccgcgtcatcaaccacagttttgataag
gacggcgacgtgcactacctgatcaagtggagggacctgccctacgaccagagcacctgg
gagacggacgacttcgacatccccgactacgacagccacaaggccacctactgggaccac
agggagcaaataataggggaagaccaacgccccctggtggtgaagaaaggaaagaaggtc
aaagaggaccacccgaagagggaggtccctcctgatgctcccatcatagatccaaccatc
aagttcgagcaccagccgtggtacatcaacgccacggggggaacgctgcacccctaccag
ctggagggcctgaactggctgcgcttctcctgggcgcagggcaccgacaccatcctggcc
gacgagatgggcctcgggaagacggtgcagaccatcgtgttcctctactcgctgtataag
gagggtcactccaaggggccctacttggtgagcgcgccgctctccaccatcatcaactgg
gagagggaattcgagctgtgggcgccggacttccacgtggtgacgtacaccggagacaaa
gacagccgggcgatcatccgggagaacgagttcacctttgaagacagcgcggtgaagtca
ggacgcaaagtgttccgcatgaagaaagacacgcccatcaagttccacgtgctgctgacg
tcctacgagctgatcactatcgatcaggccatcctgggctccatcagctgggcctgcctg
gtggtggacgaggcgcaccggctgaagaacaaccagtccaagtttttcagaatcctcaac
ggctacaagatctactacaagctgctgctgacggggacgccgctgcagaacaacctggag
gagctgttccacctgctgaacttcctgacgccggctcgcttcaataacctcgagggcttc
ctggaggagttcgccgacatctccaaggaggaccagatcaagaagctgcacgacctgctc
ggcccgcacatgctcaggaggctgaaggtggacgtgttcaagaacatgccgtccaagacg
gagctgatcgtgcgggtggagctcagccccatgcagaagaaatactacaaattcattttg
acgcggaacttcgaggctctgaactccaaaggcggagggaaccaggtgtcgctgctgaac
atcatgatggacctgaagaagtgctgcaaccacccgtacctgttcccggtggccgccgtg
gaagctcccgtgtcgcccaacggctcgtacgatggaaaccagctggtgaagtcttcaggg
aagctcacgctgctccagaaaatgctgaagaagctgaaagaggaaggacaccgagttctc
atcttctctcagatgacaaagatgttggatctgcttgaagatttcatggagtttgagagt
tataaatatgaacgtattgatggagggattactggagccctgagacaggaagccatcgac
cgcttcaatgctccgggcgctcagcagttctgcttcttgctgtcgacgcgggccggaggt
ctcggcatcaacctggcgagcgccgacaccgtcgtcatctacgactcggactggaatcct
cacaacgacatccaagccttcagcagagcccatcgtatcggccagaacaggaaggtgatg
atttatcgcttcgtgactcgcggctcggtggaggagcgcatcactcaggtggcgaagagg
aagatgatgctgacccacctggtggtgcggcccggcctgggctccaagacgggctccatg
tccaaacaggagctggacgacatcctcaagttcggcaccgaggagcttttcaaaggcgag
atggaagcggcggcgcgggccatgggcgcaacgggcgacactaaagagggcgaggagggc
aacgtgattcactacgacgacgacgccatctccaagctgctggaccgcagccgcgacgcc
accgaagacacggagatccagaacatgaacgagtacctgagctccttcaaggtggctcag
tacgtggtgaaggaggaggaaggagaggaggaggtggagcgggagatcatcaagcaggag
gagaacgtggacccggactactgggagaagctgctccgccatcactacgagcagcagcag
gaggacctggcccgcaacctgggcaagggcaagcgcatccggaagcaggtcaactacaac
gacaccacgcaggaggaccaagagtggcaggatgatctttcagacaatcagtcggagtac
tctgtggggtccgaggacgaggacgaagatttcgaggagaggcctgaaggtggacgcaga
cagtctcgccggcagatgaagaacgagaaagacaaacctctgccgcccttactggctcgg
gtcgggggcagcatcgaggtcctggggttcaacgcccgccagaggaaagccttcctcaat
gccatcatgcgctgggggatgcctccgcaggacgcgttcaactcccattggctggttcga
gacctgagagggaagagcgagcgtgagttcagagcctacgtatctctgttcatgaggcat
ctctgtgagccgggggccgacggagccgagaccttcgctgatggagtcccgcgtgaggga
ctttcccggcagcatgttctcaccaggatcggcgtcatgtctcttgtcaggaaaaaggtg
caagagtttgagcatgttaatggcaagctgagttccccagatctgattcccatcggcatg
gagctgaagaagctgactgagagtttatcttctgaccccaacacccccgtggcggccagc
cccgccgccacacagccgggcacgcccgtcccaccagagaagaccgagtctctcttgagt
accgctgaagacaaagagaccaccgagcaagacggcaagaagccgccagagcaggactcc
tccggcgccgagccagcatccgtctctgagaaggcgtctgacggtgaagagatgaaggcc
ggctcggaggagaaaacggcggatgagagggaccgaaccgagtccccgtcctcaaaggcc
gagccgtctgccaactcaaaggagtccagacagacggagctgtcgtccagtcaaacctct
cctaaagcagagcccagcaaagacgcagagaagtcctcagaaaaaggagatactgaatct
cctctggcaaaaactgaagacaaggaaaataagccagctgctgcagatgatttgaggagt
gaagatgcactcgagggtcgattgaatggagacaaagacgctttggacgagatggatgag
agcaggaaggaggacaagaacggatacaaaaccaagttcatgtttaatatcgctgacggg
ggcttcacggagttgcacaccctctggcaaaccgaggagcgagcggcgctgtcttctgga
aagatgcacgacatctggcaccgccggcacgattactggctcctcgctggcatcgtgaca
cacggctacgctcgttggcaagacattcagaacgacccgcggtatgccatcctgaacgag
cccttcaagaccgagatccacaagggcaactacctggagatgaagaacaagttcctggct
cggcgcttcaagttgctggagcaggctctggtgatcgaggagcagctgaggcgggcggcg
tacctgaacatgacccaggaccccggccacccggccatggcgctcaacacccgcttcacc
gaggtggaatgtctggccgagtcgcaccagcacctgtccaaagagtcgctggccgggaac
aagccggccaacgccgtgctgcacaaagtgctgaaccagctggaggaacttctgagtgac
atgaaggctgacgtgactcgactgcccaacatgctgtcccggatcccgccggtgtcggcc
cgcctcaacatgtcggagcggagcatcctgagccgcctcaccagccggggcagcgagccg
ccgccgcagcagcccttcctccagggggcgttcggctgctcccagatgttcggcggcggc
ttcgggggagcgttcagggggcccggcggtcaggccatggtcaactacagccagatgcct
ctgggcccctacgtcagcgtgtcgtccaacggcccgccgcctcccaccagccacctggac
aagaagtcgcttgactccttgagggacgcggccacgcccgacctcaaagcaggcaaacct
agtgatgtcatctgcattgaggactag
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integrated database retrieval system
