Clinocottus analis (woolly sculpin): 137804922
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Entry
137804922 CDS
T10471
Name
(RefSeq) protein shortage in chiasmata 1 ortholog isoform X1
KO
K28108
shortage in chiasmata 1
Organism
cana Clinocottus analis (woolly sculpin)
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cana03036
]
137804922
Chromosome and associated proteins [BR:
cana03036
]
Eukaryotic type
Meiosis-specific proteins
Others
137804922
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5587
Motif
Other DBs
NCBI-GeneID:
137804922
NCBI-ProteinID:
XP_068460525
LinkDB
All DBs
Position
Unknown
AA seq
1504 aa
AA seq
DB search
MQTFPSIRFKALDYVFETTTRLKVMRNLLALPEPYVTGTSDLYPHDGQLPDVTYRTPWIR
GKVISTCKLFVSGSVLDDLGEKSQADILPERFHVTPSEVNRDVELIPSSNPDSLEDLDLD
ENVCLLKDTWINNTCQEPFFKLTADQMKHGKENRDLLLPEELMVADYLPHFKRHLPTMKA
KLSRLRTLPVADPLLSSTGDAISEDAIFRHSCASFKKPPDVYIRDLQTCANIHEEFAKEP
LMKGESLLLPVVVDTLNLSQENCTPFSSICDQMIVAPEQLDEQLPVLEVLCKALLSDGSA
SVDISQYEVPEEPDVKCDIKGGLMELAGRLMLPTEMELDVTLTSTPKTSRTPLCPSTCEL
QEEELSVISGGSLVSARAQKEMEAALWKAEKHPTFVVRLLLAEPQIYEPAVDFHPLSEAW
KVITSENQSSVITDGDKLQSEMAIAALPAFLCINGEFTESIRTEFPSTTEEKMEDFKKLS
PEHMEITSVLMKPTNKTLLPRPKKCETAAFPAETIDVTRLQEETVADASRNGVNTNHQEG
KPAPLICSNFAATTSTKYEVSKGMFLEGAAMFSAHEDAISTGRNDSKTKQIAGSARERHR
CPAVSRHPPEKDVDPLAIFMMLTAPVTETPKSSTPAPKVDQQKTPSEHHQPPPAQMQTRR
PDQRPTHLSGAVSANATREQKAAGLARGKIVPAVLQSVTKNRQDSGVVQVRATDSQQRAH
CELLAFAQPCLSSARQLGLNFPVRGDFSGLAPDQTHFFLKQQEKALSRTHGQSAELVRDQ
ELLFNQAALIHVLVTFKELLLKCDLGTALEYLTTAAEGCAEQILEQLLKRLKVVLYLSHK
NQESNLKLLELQKMLASWLHGRTGQNSSEKILVIISVDSDDIRSLIISSLSYVAGAAVTA
VCPEDDKKKLNGARVVSSTCDSVCVVVFEQHVGPDFPWSCFSLVVEYDHPGPSPWAAVCR
ERSISHLTFDTILPDTTMWCLKDEVPYVLFVTEGLLNCPLLLQTLESKFDITALERSHCP
SLQMLGGTHHYAVITVDESTAIIIQEEDELCHERASERVVMRLTALSLQYNNCWLILHCR
DNQGGGFSTEAFSNLVLVYSSMVLFGKKSEDLDIKVLIVSEVIDIAKWIRQICFHSLMAG
EKDPLSYLDRDWLTVIPSQEEKCLLQFPSINPLVSQLMLRRAPSLRWLLGASLPQLMELL
PEVPQKVLKLFSDTTSLYTPTTDQPKSQTNITETNQQTDPPNGPWTTTADPEYMNSDRQE
EAPINLHPELFCSDTSFPFGADRSFSEPDTDSMVQEENTDFRLNLSSSFGSPDIPLQRSW
TSSDPWREEDRGREEVTFSGWRPRAGAVGRVVGRANDEWTQRAPSNLSVATRRFQLESPF
KLDSAFGHSRILQQPANSQSSTSSAVFSDLQHPDIQHNPYGLRPPTEDTPWGRGPNSDDC
LMSSRDTATISARYGSTRWTGQERKRRAEADGLVETVLTPLKRPRLSYEKVPGRNDGQTR
LKLF
NT seq
4515 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccttcccctccatcagatttaaagctctcgactatgtttttgagaccaccacc
cgtctgaaggtgatgaggaacttactggcgctgcctgagccttacgtcactgggaccagt
gacctgtacccgcacgacggccagctgcctgacgtcacctacaggaccccgtggatcaga
ggaaaggtgatctcaacctgcaaactcttcgtcagtggttctgtgctcgatgacctagga
gaaaaaagccaagcagatattctaccagaaagattccacgtgactccaagtgaggtgaac
agggacgtggagctgatacccagctctaatccagactcactggaggatctagacctggat
gagaatgtctgccttttaaaagacacatggatcaataatacatgtcaggaaccatttttt
aagttgaccgctgaccagatgaaacacggaaaggaaaacagagatctcctcctgccagaa
gagctcatggttgctgattacctgccacactttaagagacatttacccaccatgaaagct
aagctgtccaggctgaggacgcttcctgtggccgaccctctgctgagctcaacgggagat
gccatctctgaggacgccatattcaggcacagttgtgcgtctttcaaaaaacctcctgac
gtgtacatcagggaccttcagacgtgcgcaaacatccacgaggagtttgctaaagagcca
ctgatgaaaggagagtctcttttgcttcctgttgtagtggacacactgaatctgagccaa
gaaaactgcacccccttttcaagcatctgtgatcaaatgattgttgctcctgaacagctg
gatgagcaacttccagtcctggaagtgctttgcaaagctctcctgtcagatggatcagca
tcggttgacatttcccaatatgaagtaccagaggagcccgacgtgaaatgtgacataaag
ggaggcttgatggagctggcaggacgcttgatgcttcccactgaaatggagctggacgtg
actttgacctcgactcccaagacgagccgaaccccactatgtccgtccacgtgtgaactt
caggaagaggagttgtccgtgatctccggaggatctctggtgtcggcgagagctcagaaa
gagatggaggcggcactttggaaggcggagaagcatccgaccttcgtggtgcgcctcctg
ttggcagagcctcaaatatatgaaccagctgtcgacttccatccgctgtctgaagcctgg
aaagtcataacgtcagagaatcagagctctgtcatcaccgatggtgacaaactgcagtca
gagatggcgatcgcagccctgccggcgtttttgtgcatcaacggagagttcacagagagc
atcaggaccgagtttccctccaccacagaggaaaagatggaggactttaaaaaactgtcc
cctgaacacatggagatcacatccgtcctgatgaaacccacaaacaaaacgctgttacct
cgccccaagaaatgtgaaacggcggcttttcctgctgaaactattgacgtcacacgtctt
caagaagaaaccgttgcagatgcgtctcggaacggcgtcaacacaaaccatcaggaagga
aaacctgcacccttaatatgttctaactttgctgctaccaccagcaccaaatatgaggtt
tcaaagggcatgtttctagaaggtgcagccatgttttctgcccatgaggatgccatcagc
acaggtcgcaacgacagtaagacaaagcagatcgccgggtccgccagagagcgtcaccga
tgtccggcggtttccagacatccaccagagaaggacgtcgaccctctggccatcttcatg
atgctgacggctccagttactgagacacctaagagctcaactccagcaccaaaggtggac
caacaaaaaacaccgtctgagcatcatcagcctcctccagcgcagatgcagaccagaaga
ccagatcagaggccgacgcatttgagtggtgccgtgtcagcaaatgctaccagagagcag
aaggcagctgggctggcgaggggtaaaatcgttcctgctgtccttcagtccgtcactaag
aacagacaggacagcggagtggtacaagtccgggctactgacagccagcagcgtgctcac
tgcgagctgctggccttcgctcagccgtgtttgagctctgccagacagctggggctcaac
tttccggtacggggagacttcagcggcctggccccggaccaaacgcacttctttctcaag
cagcaggagaaggcgctcagcaggactcacggacagagcgccgagctggtcagagatcag
gagctgcttttcaaccaggcggctctgattcatgtgctggtgacatttaaggagctgctg
ctgaagtgtgacctcggtactgcattggagtacctgaccacggccgcggaggggtgtgca
gagcagattctggagcagctgctgaagaggttgaaggtcgtcctctacctcagccacaag
aaccaggagtcaaacctcaaactgctggagctgcagaagatgctggcctcgtggctgcac
ggcagaacaggacagaacagctcggagaaaattctcgtcataatatcagttgactctgac
gacatcagatctttgatcatcagcagtttgagctacgtggctggtgctgctgtaacagca
gtttgtcctgaagatgacaaaaaaaagctgaatggtgccagggtggtcagcagcacgtgc
gacagcgtgtgcgtggtggtgtttgagcagcacgttggccccgacttcccctggagctgt
ttctctctggtggtggagtacgaccatccgggcccgtccccgtgggccgcagtctgcaga
gagaggagcatcagtcacctcaccttcgacacgatcctccccgacaccactatgtggtgc
ctgaaggacgaggtgccatacgtgttgtttgtcacggagggacttctcaactgtccactg
ctgctgcagacactggagtcaaagtttgatataacggcgctggagaggagccactgtccg
tccctgcagatgctcggagggacccatcactacgccgtgatcacagtggatgaaagcacc
gctatcatcattcaggaggaggatgaattgtgtcacgagcgagccagtgaaagagtagtg
atgaggctgaccgctctttctttgcaatacaacaactgttggctcatcctgcactgtaga
gacaaccagggaggaggattttccactgaagccttcagcaacttggtgttggtttactcg
tctatggtgctgtttggcaagaagtcagaggatcttgacatcaaggtgctgattgtgtcc
gaggtgattgacatagccaaatggatccgccagatctgctttcacagcctgatggccggt
gagaaggacccgctcagctacctggacagagactggctgactgtgattccttcacaggag
gaaaagtgtctgttgcagttcccgtctattaaccctctggtaagtcagctgatgctgagg
agagcgccatccctccggtggctcctgggggcctctctgcctcagctgatggagctgctc
cccgaggtcccacagaaagtcctcaagctgttcagtgacaccacctctctgtacacaccg
accacagaccagccaaagtctcagacaaacatcactgagacgaatcaacaaaccgatcca
ccaaacggcccctggaccaccactgctgacccagagtacatgaactctgaccggcaggaa
gaagctcccatcaacctccatccagaactattctgcagtgacaccagcttcccgttcgga
gccgatcgcagcttcagtgaaccggacacagactcgatggtgcaggaggagaacacagat
ttcagacttaacctgagctcctcctttggcagcccagatattcccctccagaggagctgg
accagcagtgatccatggagggaggaggacagaggcagagaggaggtgacgttttctggc
tggagacccagagctggagctgtggggagagttgtcggaagagcgaacgatgagtggaca
cagagagctccatcaaacctcagtgtcgccactcgccgattccaactggagagtcctttc
aagctggactccgcattcggtcacagccgcatcctgcagcagccggccaacagtcagagc
tccacttcctctgcggtcttcagtgacctccagcatccagatatccagcataatccttac
ggtctgaggcctcccacagaggacacgccgtggggtcgaggtccaaacagcgacgactgc
ctcatgagcagcagagacacggcaaccatttcagctcgctacggctccacacgctggacc
ggacaagagaggaagaggcgggccgaggctgacggcttggttgaaacagtgttgacgcca
ctgaagaggccgaggttgagctatgagaaggtgcctggcagaaatgatggacagacaagg
cttaaattattttaa
DBGET
integrated database retrieval system
