| Entry |
|
|---|
| Symbol |
vps13a
|
|---|
| Name |
(RefSeq) intermembrane lipid transfer protein VPS13A isoform X1
|
|---|
| KO |
| K19525 | vacuolar protein sorting-associated protein 13A/C |
|
|---|
| Organism |
cana Clinocottus analis (woolly sculpin)
|
|---|
| Brite |
KEGG Orthology (KO) [BR:cana00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:cana04131]
137804955 (vps13a)
Membrane trafficking [BR:cana04131]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
137804955 (vps13a)
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
Unknown
|
|---|
| AA seq |
3264 aa
MVFESLVVDVLNRFLGDYVVNLDSSQLKLGIWGGDAVLRNLEIKENALSQLDIPFKVKAG
HIGQLQLKIPWKNLYTQSVEATLDGVYLLMVPTASIKYDAAKEEKQLQEARQRELQRIEE
TKLKAAGKEDPNLEKQDTFVEKLVTQVIKNLQVKISNIHIRYEDNVTNPNCPLSFGVSLK
NLSLQTCDENWNPKLLDENSRLFFKLVQLDNLFAYWNVNSLLFSNQSADDALQCLQSSVD
IHNSMSVSHDFIFRPISAGAKLRMNPRSDVDFSSPKVDLMVNLSEVAIELNRPQYISILE
LLGSVDMMSRNLPYRKYRPMVHARRNARIWWRYVITSILEVDVKPRLHMWSWQHIRSHRQ
MVKCYRELYKTKITNKKPSEELLKALEEPEKTLDIFNITLARQQAEVEVSKAGLRIYRPG
LKMEEEETQGWMSWMWNWGGEADAKTKEVKTGGFDELLTAAEKGKLYTAIGYSETAANPN
LPKNFEDMKVNFHMEKLSVSLKDNKDENEIIRLTVGELKSTLTQRPGAQAIKLTAWLSLF
EVTGLASNQPAPTVLSSRKAATGAGTPLLCILFEINPLDESANQRLHVESQPLEIIYDAV
TVNSLSAFFMPPDDLQLDELTNATLMKLEQFRDRTATGLMYVIETQKVLDLKVNLMASYV
IIPQTGFYNGTQNILLLDLGHFKMSSQSKKHLPQLSVGSSNIEDIMSRAYDSFDIQLSSL
QFLYSKPDGDWKMARKQRQSLLHILEPVDLKVVFSRAMVIKDSRMAKYKMSGELPLLSLR
ISDVKLRNVLQLVESISLPESKSTAWDVSSTSKPRQSFTPRLTPRRPLNLTDKRSSLLFE
SCETISITSMGSEEDLFYDAPSSPVGDRSFFPDNPMPLSYKKKGPEAQKNMTEFIMTFEI
SEFSVQLCRLSGDQEITVLHLDIDGLGTELKLCTFDMTSNTYLREICLKCPEYMDSEEKQ
VQLITTLDNTEVDLLTLEYVKANKNGPEFKSQHNNTEQLIKVTFSSLDVHLHTEALLNTM
NFLTNLLPPSTKKEGGEDQLPTILEEEEPEVEGEAEKKEEATVTRKKSTKSSKFANVVTL
HIKTDLHCLKVFIRGQKARIAEISIEGLVSEVLMRKKEMEVLANLKNIVIVDCDKDALYK
KAVSIADKEVFAFRMVNYTNATEGNAYLDMSKVDTSVKLTVRCIQVIFLNKFVSSILAFI
NNFQEAKEALAEVTVQAAEKAASGVKVLAERSTRIALNVHFNAPVIFLPQSSSSSNVIVA
DLGRLSVNNCFAKQPFKSNAKIPPVVDVMIVRLTDLKMYRTRYVDEGFQGETELLMPVSL
DVKIQRNLSSNWYHKIPDIEITAHLKPIALILSQDDMTVVLRTLSENLSERSDALPPSAP
HPPTSERYFDSVSKGSGTTEPTSSNTVVTSAVVEPYKSSKLKSTLKVDFKFDSMTLVLYS
PNVNELHLLDSHDEQLKLAEFTLGTISTSVHMFSDSSMKASVQLAACLLDDKRPKIKMVT
PRMIAMRPGAEQNMMVEVNYRQGRDGTTLDTVVQDVYLCASMEFLLTVADIFLKATQQGF
EQKPQPKSSTGVGEKKNMNSSTTSKESTLASAVVSKTEINVVVSNPKIVFVADLTRADAP
ALVMTTECELVMRSGAEGSQMTAVIKDLKVVACPFLREKKEKNVATVLLPCQVIFQSTQS
LTSPQAMEVSINALTLKVSPIIINTVMTIQSALTPKAETPKELDSPVPVDLWEKRGWKEL
KLWFLEEEGDENTESLTPLIPRGESLKVTIKSVCLTLEAGVGHRTIPMLLAKSSFHGDVK
NWSTLINLHSELNLEVNYFNEMMGVWEPLLEPLEDETRDGFRSWTLELKMKKKPVKSTGL
SDEVDYHVPDYKTVIVISSKDQLNITLSKCGLTMLTNLGTAFAEAAKQTADSFQKDEAPF
VVKNRLGLPVSVRHSELFCPVGQHSINKTVKLQDGETVGMDYSTKADSDQFSAMISLSEK
DYYIEPTPMGHTSAGVIPLIKVGGGMYNVMHQDSGVTRFLVCQINSVEGSKYIKIRSPFQ
IINHFSIPFKVLEESTCLGTALPTEEFCVPLDSYRSVLSLQPITEDDAEDQFECSDGFSY
DEFSNKQPETCLQQICRRRGDQGGVLMVNMVPVRYTVTFKHTGSVGDNFDVPFVLHLWPS
ILLRNLLPYPISYKLKDSGASNAEATLNPGHSAQLHTAVINQSRLDLCLLNYMAQDWSSE
YSFHSDKEEITFIVFQSLQENDEDDGEGTERKRAELDIAVHVKYDLGQTVVAFHSPYWMV
NKTGRLLQYKADDIHRKHPLDYDMPLLFSFKPRHFMKNNKVRLMISDSELSDEFSLDTVG
SYGDVKCKGQYIDYLVGVKIDASSFSLTRIVTFVPFYMLVNRTKHSVYICEVGQENWTEA
QPEQSALPFWPEKDTKKLMIKVEGCVLPPRTIDFTRPENCLLLHLDNSVGGIAVDVNLSE
HSATIRFSEYHDGAAPFLIINHTKDQTLQFQQSARTETSWVADELLDLSFSPEEDSSLKG
TEKEELEAGKAVHYTWTEPTGSRELCWKCGSYGGKLKTEEDLREDMNNEGKLFVISFYEG
LQRVVLFTEEQRIYKMICESEKAQLAEQEIILSLQNVGVSLVNNSSGQEVSFIGITSSDV
VWELKPKKKNRWKTLSFKEAEMLENRFKEYTESGPVDNAIVDLENNFQVSFTPNGMDMRM
LQPLEAPLRRHFLPGVKVEYSVSPRQSAYRIQIHHIQIQNQLPGAIFPCVFYPVKLPKSI
TMDAEPKPLTDISIVTRTAGHSDISRIKYFKVLIQEMDLKLDLGFLFAILDLFTPENAGI
VNSDQEVELFVKDIEYIQTELNHASAADTSPISLYEYFHISPIKIHLSLSLSTGGHDGLR
EKRDKELIPVQSLNLLLKSIGATLTDVQDVVFKLAFFELTFQFCTTQQLQWEVIRHYSKQ
AIKQMYVLVLGLDVLGNPFGLIRGLSEGVEAFFYEPYQGAIQGPEEFVEGMALGVKALVG
GAVGGIAGAASRITGAMAKGVAAITMDEEYQRKRRDTMNKQPSSLKEGLTRGGKGLVSGF
VSGITGIVTKPIKGAQKEGAAGFFKGVGKGLVGAVARPTGGIIDMASSTFQGIKRAAETS
QDVTSLRPPRFIHEDGVIRPYKEREGLGSQMLKKIENGRFAKYRYFAHAKVNESDFLMIT
KRGIFFVTRGTFGQLTCEWQYLFEEFTKEPMIVEDRRLRIEAKERVKSVFHAKEFGKIIN
FKNAELANWVLARLDDARESFPKY |
|---|
| NT seq |
9795 nt +upstreamnt +downstreamnt
atggtcttcgaaagcttggtggtagatgtcctcaaccgatttttaggggactacgttgtc
aacctcgacagctctcagctaaagcttggcatatggggaggcgatgctgttcttcgaaat
cttgagataaaggaaaatgccttgagtcaactcgacattccttttaaagtgaaagcaggt
catatcggacagttgcagctaaagataccatggaaaaacctctacactcagtcagtagag
gcgacactggatggcgtctatctgctcatggtcccaacagcaagcataaagtatgatgca
gcaaaggaggaaaagcagctacaggaggctcgtcagagggagctacagcggatagaggag
acgaagctgaaggctgcagggaaagaggaccccaatctggaaaagcaggacacctttgtg
gagaagcttgtcactcaggtcatcaaaaacctgcaggtcaagatctctaacatccacata
cgatatgaagataatgtcaccaatccaaattgtcccttgtcatttggagtgtcgcttaaa
aacctcagtcttcagacatgtgatgagaactggaatccaaagcttttggatgagaattcc
aggcttttcttcaagttggttcaattagacaacttgtttgcctactggaatgtcaactct
ttactcttctccaatcaaagtgcagatgatgccttgcaatgtctccagagcagcgtggat
atccacaactccatgtcggttagccatgacttcatttttcgtcctatctcagcgggcgct
aaattgcggatgaatccccgatcagatgtggacttctcctctcccaaagtggacctaatg
gtcaatctcagtgaggtggccattgaactcaacagaccccagtacattagcatcctggag
ctgctgggctcagtggatatgatgtctcggaatctgccgtacaggaagtacagaccaatg
gttcacgctcgcaggaatgcccgcatttggtggaggtatgtgatcacaagcatcttggaa
gtggatgtgaagcctcgtctccatatgtggtcttggcagcacattcgcagtcaccggcag
atggtaaaatgttacagagagctctacaagaccaaaatcaccaacaagaagcccagcgag
gagctgctcaaggcactagaggagcctgaaaagaccttggatatttttaacatcactttg
gccagacagcaggctgaggtggaggtaagcaaggcaggcctacgcatttaccgtccaggg
cttaagatggaggaagaggagactcagggctggatgagctggatgtggaattggggagga
gaggctgatgcaaagacaaaagaggtcaagactggaggctttgatgagctgttaaccgcc
gctgagaaaggcaaactctacactgccattggatatagtgagacagctgcaaatcctaac
ctgccaaagaattttgaggacatgaaggtcaatttccacatggaaaagttgtctgtgtcc
ctcaaagacaacaaagacgaaaatgagatcatcaggctgactgtgggagagctcaagtcc
acactcacacagagacctggagcacaagccatcaaactcacagcttggcttagtctgttt
gaagtcactggcctggccagtaaccaacccgcaccaaccgtcctgtcatcaaggaaggca
gcgacgggagcaggaaccccgctgctttgcatcctgtttgagatcaatccactggatgag
agtgctaaccaacggcttcatgtggaatctcaacccttggaaatcatctatgatgctgta
acagtgaacagcttgtcagcgttcttcatgcctcctgacgacctgcagctggatgagctc
accaacgcaacccttatgaaactggagcagttcagagaccgcacagccaccggtttaatg
tatgtgatcgaaacacaaaaagtcctcgacttgaaggtgaacctgatggcctcctatgtc
atcattccacagactggcttttacaatggtactcagaacatcctgctgttggaccttggg
catttcaagatgtccagtcaaagcaagaagcatctgcctcagctgtcagtgggctccagc
aacattgaggacatcatgtccagagcatatgacagctttgacatacagcttagcagcctg
cagttcctttacagcaaaccagatggcgactggaaaatggcccgtaagcagagacagtca
ctgctccacattctagagccagtagatctaaaagtggttttcagcagggcgatggtcatc
aaagactcccgcatggcaaagtataagatgtctggagagctccctctgctctctcttcgt
atttccgatgttaaacttcgaaatgttctgcagctggtagaaagtatctcactgcctgag
agcaaatctacagcttgggatgtatcctctacttcaaagccaaggcagtcgttcacccca
aggctcactcccagaagacctctgaatttaactgacaagcgctcctctctcctttttgag
tcatgtgagaccatcagcatcacctcaatggggtcggaggaagatttgttctacgatgct
cccagttctcctgttggtgatcgttcattcttcccagataatcccatgcccctgagctac
aaaaaaaaagggccagaagctcagaagaacatgacagaattcatcatgacatttgaaatc
agtgagttttctgttcagttgtgtcgtctgtccggggatcaggagatcacagtgctccac
ttggacatagatggtctgggcactgaactgaaactatgcacctttgacatgacatctaac
acctacctacgagagatctgcctcaagtgccctgaatacatggattctgaagagaagcag
gttcagctgatcactactctcgacaacacagaagtagaccttctcaccctggagtatgtt
aaagctaataagaatggccctgagttcaagtctcaacacaacaatacagagcaactcatt
aaggtgaccttttcatccctggatgtccatctccatacagaggctctactgaacaccatg
aacttcctcaccaacctccttcctccatccactaagaaggagggaggggaggatcagctc
cccaccatccttgaggaggaggagccagaagtagagggggaggcagagaaaaaggaggaa
gctactgtaaccaggaaaaaaagcacaaagagttcgaagtttgcaaatgtggtaactctg
catatcaaaactgatctccactgtctgaaggtttttattcgaggacagaaagccaggatc
gcagagattagtatcgaaggtctggtttctgaggttctgatgaggaaaaaggagatggag
gttcttgcaaacctgaagaacattgtgatcgtagactgtgacaaagatgcactttacaaa
aaggctgtgtcaatcgcagataaggaagtgtttgctttccgcatggtgaactacacaaac
gcaacagagggaaatgcctatctggacatgtctaaagttgacacctctgtcaagctgacc
gtcagatgcatccaggtcatattcctcaacaagtttgtctcctccatactggcattcatc
aataacttccaggaggctaaagaggccctcgctgaggtgactgtccaggctgcagaaaag
gcagcatcaggtgtgaaggtgctggcagagcggagcactcggatcgctctgaacgtccac
ttcaatgcacccgtcatcttcctgccccagtcctcctcttcctctaatgtcatcgtagct
gaccttggtcggctgtctgtcaataactgctttgccaagcagccctttaaaagtaatgca
aagatcccgcctgttgtggatgtaatgattgtgagactgactgacctcaagatgtacagg
accagatacgttgatgaaggttttcagggagagaccgagctgttgatgccagtcagccta
gatgtgaaaatccaaagaaatctttcatccaactggtatcacaagatacctgacatagag
atcactgctcatcttaagcccatagctctgatcctcagccaggatgacatgacagtggtt
ctgaggactcttagtgagaatctgtcagagaggtctgatgcgcttccaccttcagctcct
catccacccaccagcgaacgctactttgactctgtatctaagggctctggaaccactgaa
ccgactagcagtaacacagtagtgacgtctgctgttgtggagccttacaaaagcagcaag
ttgaagagcacactcaaagtagacttcaagtttgactcaatgacactcgtcttgtacagc
ccgaatgtgaatgagctacacctgttggattcccatgatgagcagctgaagttggcagag
tttactctgggcaccatctccacctctgtccacatgttctccgacagctccatgaaggct
tcagtccaactggctgcctgccttctcgatgacaagcgacccaaaatcaagatggtcacc
ccgaggatgattgcaatgcgtcctggtgccgaacagaacatgatggtggaggtgaactac
cgtcagggccgcgatggcaccaccttagatacagtggtgcaggatgtgtacctgtgtgcc
agcatggagttccttctcacggtggcagatatctttctcaaggccacccagcagggtttt
gaacaaaagcctcaacccaagagcagtactggagtgggagagaaaaagaacatgaactct
tctaccacatcgaaagagtctactctagcttcagctgtggtgtccaagaccgagattaat
gttgtggtaagtaacccgaagattgtgttcgtggctgacttgacgcgcgctgatgccccg
gccctcgtgatgaccacggagtgtgagctcgtgatgagaagtggtgcagagggctcccag
atgactgcggttatcaaggaccttaaggtagtggcctgtccgttcttgagagagaagaag
gaaaaaaatgtagccacagtgctgctgccgtgtcaggtgatcttccagagtactcagtcc
ctgacctcccctcaggctatggaggtctccatcaatgctctcacattgaaggtatctcca
ataatcatcaacacagtgatgaccatccagtctgcactgactcccaaagcggagacccca
aaggagctggatagtcctgttcccgtggacctgtgggagaaacgaggctggaaggagctc
aaactttggttccttgaagaggagggggatgaaaacacagagtccctgaccccactaata
ccacggggagagtcattaaaggtgaccatcaaatcggtctgtctgactctggaggctgga
gtgggacaccgcactatccccatgcttctggccaagtcctccttccatggagatgtcaaa
aactggtccacactcattaacttacacagcgagctcaacctggaggttaactatttcaat
gagatgatgggagtgtgggaaccgctgctggagcccttagaagatgaaacaagagatggt
tttagatcatggacactggaactcaagatgaagaagaagccagtgaagtccacaggtttg
tcagatgaggtggattaccatgtcccagactataagacagtgatcgtcatcagcagtaaa
gaccagttgaacatcactctctccaagtgtggtctgaccatgcttactaacctgggcaca
gcatttgcagaggctgccaaacagacagcggactcttttcagaaagatgaggctccgttc
gtagtgaaaaaccgccttggcctgccagtgtccgtgcgccacagtgagctgttttgtccc
gtcggccagcacagcatcaacaaaactgtgaagctgcaagatggagaaaccgtcgggatg
gattattccaccaaagcagactctgaccagttctcagccatgatctccttgagtgaaaaa
gactactacatagagcctactccgatgggccacacctcagccggtgtgatccccctgatc
aaggtgggcggagggatgtacaatgtaatgcaccaagactcaggggtaactcgtttcctg
gtctgtcagattaactctgtggagggcagcaagtacatcaagatccgctcacctttccag
atcatcaatcatttctcaatcccattcaaagttttggaggaatcaacatgtctgggtaca
gctctccctactgaagagttctgtgtgcctctggactcgtataggtccgtgctgagcctt
cagccgataacagaggatgatgctgaagatcagtttgagtgctcagacgggttcagctac
gacgaattcagcaacaagcagcccgagacgtgcctccagcagatctgccgtcgccgtggc
gatcagggtggtgttcttatggtcaatatggtgccagtgagatatactgtgacattcaaa
cacactggaagtgttggggacaactttgatgttccctttgtgcttcacctgtggccttcc
atcctgctccgcaacctactgccttaccccatctcttacaaactgaaggacagtggagcc
tccaacgctgaggccactttgaacccgggccactccgcccagcttcacactgcagtcatc
aaccaatcaagactcgatctctgcctcctgaactacatggctcaggactggtcttctgag
tacagttttcacagtgacaaggaagagatcaccttcatagtgttccagtctctgcaagag
aatgacgaagacgatggtgaagggacggagaggaagagggctgagttggatatagcagtg
catgtcaaatatgacctggggcaaacggtggtcgccttccactcgccatattggatggtg
aacaagacgggccggttgctgcagtacaaggctgatgatatccaccgtaaacacccgctg
gactatgacatgcctctgctcttctccttcaagcctcgtcacttcatgaagaacaataag
gtccgtcttatgatctcagacagtgaactctctgatgaattctccctggatacagttggt
agctatggagatgtcaaatgcaaaggccaatatatagattacttggttggcgtgaagatt
gacgcgagcagtttcagtctgactcgcattgtgaccttcgtgccattttacatgctggtc
aacagaaccaagcacagtgtctacatatgtgaggtggggcaggagaactggaccgaggct
cagccagaacagtcagcccttcccttctggcctgagaaagacacaaagaagctaatgatc
aaagtggaaggttgtgtattgcctcctcggacgattgacttcacacgaccagaaaactgc
ttattgctgcatctggacaattctgtgggtggcattgctgtagatgtgaacttgtcagag
cactccgccacaatccgattctctgagtaccacgacggcgcggcccctttcctcattatt
aaccacacaaaagaccagactctgcagttccaacagagcgcccggacagaaacctcgtgg
gtggctgacgagctactcgacctctccttctcaccggaggaggacagctctctgaagggg
acggagaaggaggagctggaggctgggaaagctgtgcactatacctggactgaacccact
ggatcacgagagctctgctggaagtgtggttcttacggtgggaagctgaagacggaggag
gacctgcgtgaggacatgaacaatgagggaaaactgtttgtgatctccttttatgaaggg
ctccagcgtgtcgtgctgttcactgaggagcaacgtatctacaagatgatctgtgagagc
gagaaggcgcagctggccgaacaggaaatcatcctctcgctacagaatgtgggcgtgtct
ctggtcaacaacagcagcggccaggaggtctcttttattgggatcacaagctctgatgtg
gtgtgggaattaaagccaaagaagaagaatcggtggaaaactctgagttttaaagaagct
gagatgctggagaaccgcttcaaagagtacactgaatctggacccgtagacaacgccatc
gtcgacctggaaaacaacttccaggtgtcctttactcccaatggcatggatatgaggatg
ctgcagccgttagaggctcctctcaggaggcacttcctgcccggggtgaaggtggagtac
agcgtatcgccacgacagagtgcctaccgtatccaaatccatcacattcagatccagaat
cagctgccaggagccattttcccttgtgttttctaccctgtgaaactgccaaaatctatc
accatggatgcagaacccaaacctctaactgatatcagcattgtcaccagaacagcagga
cactctgatatctctcgcatcaagtactttaaggtgttgattcaagagatggacctgaag
ctcgatctgggcttcctgtttgccatcctggacctgttcacaccagagaatgccggcatc
gtgaactcagaccaggaggtggaactgtttgtgaaggacatagagtatatacagacggaa
ctaaaccatgcctctgctgctgacacctctcctatcagcctctacgagtacttccacatt
tcccccatcaagattcatctgagtctctctctgagtacgggaggacatgacggcctaagg
gagaagcgagataaggaactcattcccgtccagtccctcaacctgctgctgaagagtatc
ggcgccacactcactgatgtgcaggatgttgtctttaagctggccttcttcgagttgacc
ttccagttttgtaccacccagcagctccaatgggaggtcatcaggcattattccaagcag
gctattaagcagatgtatgtactggtgctgggcctggatgtgcttggaaatccttttgga
ctgattagaggactgtcagagggagtggaggcattcttctatgagccttatcagggagcc
atccaggggcccgaggagtttgtggaagggatggctcttggggtgaaggccctggtggga
ggagctgtcgggggtatagcaggtgcagcctcgaggatcacaggtgccatggcgaagggt
gtcgctgccataacgatggacgaagaataccagcggaagagacgagacactatgaacaag
caacccagtagcctgaaagaggggctgaccaggggtggaaagggattagtgtctggtttt
gtcagtggaatcacagggattgttaccaaacctattaaaggagcccagaaggagggtgca
gcgggcttttttaaaggtgttgggaaaggtctggttggcgcagtagccagacctacagga
ggtattattgacatggccagcagtactttccaagggatcaagagggcagcggagacttca
caagacgtcacctctctgcgtcctcctcgcttcatccacgaagatggcgtcatacgacca
tataaggagagggaaggcctcggaagtcagatgctcaagaaaattgagaatggacgtttt
gccaagtacaggtactttgctcatgcgaaggtcaatgagtccgacttcctcatgatcacc
aagaggggaatattttttgtgaccagaggcacatttggccagctgacctgtgaatggcag
tatctgtttgaagagttcaccaaggagccgatgattgtagaagaccggcgacttcgcatc
gaggccaaggagagagtgaagtctgtcttccatgccaaagagtttgggaagatcatcaac
ttcaaaaatgcagagttggccaattgggttcttgccagattggacgacgcaagagagagt
ttccccaaatactga |
|---|
