Clinocottus analis (woolly sculpin): 137805308
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Entry
137805308 CDS
T10471
Symbol
top3b
Name
(RefSeq) DNA topoisomerase 3-beta-1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana03440
Homologous recombination
cana03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
137805308 (top3b)
03460 Fanconi anemia pathway
137805308 (top3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cana03032
]
137805308 (top3b)
03400 DNA repair and recombination proteins [BR:
cana03400
]
137805308 (top3b)
Enzymes [BR:
cana01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
137805308 (top3b)
DNA replication proteins [BR:
cana03032
]
Eukaryotic type
DNA Topoisomerases
137805308 (top3b)
DNA repair and recombination proteins [BR:
cana03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
137805308 (top3b)
FA (Fanconi anemia) pathway
137805308 (top3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Motif
Other DBs
NCBI-GeneID:
137805308
NCBI-ProteinID:
XP_068461261
LinkDB
All DBs
Position
Unknown
AA seq
855 aa
AA seq
DB search
MRTVLMVAEKPSLAQSIAKILSKGNCTSRKGLNGACSVHEYPGSFQGQSVRFKMTSVCGH
VMSLDFIGKYNNWDKVDPAELFSTAPTEKKEANPKLNMVKFLQVEARGCDYVVLWLDCDK
EGENICFEVLDAIQPVMNQGSARDQTVYRAKFSSITDTDLCNAMNCLGEPNRNEALSVDA
RQELDLRIGCAFTRFQTKYFQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETY
WVLQAKVFRGKDSPLTLDWKRVRVFDRDVGQMFVNQAKTSREAQVESVSKKEKAKQRPQA
LNTVEMLRVASSSLGMGPQHTMQIAERLYIQGYISYPRTETTHYPENFDLKGTLKEQTSN
PMWAEEVKALLSTGINRPRKGADVGDHPPITPMRAASEGELGSDGWRLYDYITRHFIATL
SQDCKYLQTTIDFTIGTEAFSCSGKTLISPGYTEVMPWQGIPLEEAMPVCERGDTFTVDE
IKLVEKQTSPPDYLTEAELITLMEKHGIGTDASIPVHINNICQRNYVTVENGRKLKPTNL
GIVLVHGYYKTDAELVLPTIRSAVEKQLNLISLGKANFQQVLQHTLDIFKRKFHYFVDSI
PSMDELMEVSFSPIAASGKPLSRCGKCHRFMKYIQAKPSRLHCSHCDETYSLPQNGAIKL
YKELRCPLDEFELVLWTSGARGKSYPLCPYCFSNTPFRDMKKGMGCNECTHPSCQHSLNS
LGIGQCVECDSGVLVLDTTSGPKWKMACNKCNVVVHFFEHAHRVQVAQESCDACDASLVA
VDFNKTRTPLPAGETQHTGCVFCDPVFQDLVELKHATMRHRGGGARRGGRGRGRGRRGNP
KKPKDKMAALAAYFV
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgagaacagtcctgatggtggcagaaaagccatccttggctcagtccattgccaagatc
ctctctaaaggaaactgtacgagccgcaagggactcaacggagcatgctcagtgcacgag
taccccggcagcttccagggccaaagtgtacgtttcaagatgacttctgtctgtggacat
gtgatgagtctggatttcatcggcaagtacaacaactgggacaaggtggaccctgcagaa
ctcttcagcacggctcccacagaaaagaaggaggccaaccccaaactcaacatggtgaag
ttcctccaggtggaagccagaggctgtgactacgtggtgctatggctggactgtgataaa
gaaggagagaacatctgctttgaggtactggatgccatccagcccgtgatgaaccagggc
agcgccagggaccaaactgtttaccgcgccaagttcagctccatcactgacaccgacctc
tgcaacgccatgaactgcctcggagagcccaaccgcaatgaagccctgtctgtggatgca
cgtcaggagctggatctgcgcatcggctgtgccttcacccggttccagaccaagtatttc
caggggaagtacggcaatctagactcctctctgatctcatttggaccgtgccagaccccg
acgctgggcttctgtgtggaacgccatgacaagatccagtcctttaaaccagagacgtac
tgggtcctccaggcaaaggtattcagaggaaaggacagcccactgacactggactggaag
agggtgagggtcttcgacagggatgtgggtcagatgttcgtcaaccaggccaagacatcc
agggaggcgcaggtggagtccgtgagtaagaaggagaaggctaagcagaggccccaggcc
ttgaacactgtggagatgttgagagtggccagctcctccttaggcatgggtccccagcat
accatgcagattgcagagcgcctgtatattcagggctacatcagctacccacgaactgaa
acaacccactatccagagaactttgacctcaagggaacactgaaggagcagaccagcaat
cctatgtgggcagaggaggtgaaggctctgctttcgaccggtataaaccgacccaggaaa
ggagctgatgtcggagaccatccacctatcactcccatgcgtgctgcctcagaaggggaa
ctgggaagtgatggctggcggctctacgactacatcacacggcacttcattgccaccctc
agtcaggactgcaaatacctccagaccaccattgacttcaccattggcacagaggccttt
tcgtgtagtggcaaaacccttatatcaccaggttacactgaagtgatgccgtggcagggc
attcccctggaagaggccatgcctgtgtgtgagcgtggagacactttcacagtggacgag
atcaagctggtggaaaagcagaccagccccccagactacctgaccgaggctgaactcatc
accctcatggagaaacatggcattggtacagatgccagcattcctgtccacatcaacaac
atctgccagaggaactatgtgaccgttgagaatggacgcaagttgaagccaaccaacctg
ggcattgtcctggtgcatggttactacaagacagatgcagagctggtgcttcccactata
cgtagcgctgtggagaagcagctgaaccttatctctctgggcaaggctaacttccagcag
gtcctgcagcacacgctggacatcttcaagaggaagtttcactactttgtggactccatc
cccagcatggatgagttgatggaggtctccttttcccccattgctgcctctgggaagccc
ttgtcccgctgtgggaagtgtcaccgcttcatgaagtacatccaggccaagcccagcagg
ctccactgctcccactgtgacgagacctacagtcttccccagaacggagccatcaagctg
tacaaggagctgcgctgtccgctggacgagtttgagctggtgctgtggacctctggagcc
cggggcaagagctacccgctgtgcccgtactgcttcagcaacacgcctttcagggacatg
aagaaaggaatgggatgcaatgaatgtacccatccttcctgtcagcactccctcaactcg
ttgggcattggacagtgtgtggagtgtgacagtggggttttggtgctggataccacttct
ggaccaaaatggaagatggcatgtaataaatgcaacgtggtggtgcacttctttgaacat
gcacaccgagtgcaggttgctcaggagagctgcgatgcctgcgacgcctctctggtcgcg
gtggacttcaacaagactcgaactccacttcctgcgggcgaaacccaacacactggctgc
gtcttctgtgatccagtcttccaggatctggtggagctcaaacacgccaccatgaggcac
cggggtggaggtgcaagacgaggaggacgggggcggggcagaggacgccggggcaatccg
aagaagccgaaagacaaaatggctgccttggcagcttactttgtatag
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