Clinocottus analis (woolly sculpin): 137805390
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Entry
137805390 CDS
T10471
Name
(RefSeq) dmX-like protein 1 isoform X1
KO
K24155
rabconnectin-3a
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
137805390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cana04131
]
137805390
Membrane trafficking [BR:
cana04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
137805390
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
137805390
RAVE complex
137805390
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
EIF3I
PEP5_VPS11_N
Beta-prop_EML
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_2nd
Beta-prop_DCAF12
Beta-prop_IP5PC_F
Beta-prop_SPT8
SSTK-IP
Motif
Other DBs
NCBI-GeneID:
137805390
NCBI-ProteinID:
XP_068461388
LinkDB
All DBs
Position
Unknown
AA seq
3099 aa
AA seq
DB search
MNLHQVLTGAVNPGDNCFSVGSVNNVPFTAYASGCDVVILGSDFERLQIIPGAKHGNIQV
CCVDCSLQGGQIAASYGSIVCVFEPVQHPDQKDTSLTKLNCQWQKTGQFVLKSMVRNLAW
HPTGSTLLTGSSSLQLWSNVAGEEGEAEEVGTQTDMTIGETHSAWRCIWQSKMASQVSLM
KFSPDGEFFATAGLDDCLVKVWYNTSKWKLGVSRLFTPPEPSDSFQGELAFSFVYLAHPR
SVTGFSWRKTSKYMPRGAVCSVLLTCCKDSVCRLWAETLLPGDGLLSGYHNNHASSRHGD
APGCAGASGNTCNGKLQGRTAQELNFQASLRGSSYRDVPQPSMIGGLPQHQSRHYNHKGS
RSSTPHANALCHFHIAASINPATDIPLLPSISSLSSVDDEEPGGPFTVHWLNNKELHFTL
AMEVFLQQLRGSLEIQDDCPREVPEDEDNFDEEDNSSRPSDSRGPEAAELPLAAVKHQVD
VLLEEWNKGADMLFSIHPMDGSLLVWHVDWLDEYQPGMFRQAQVSFVSRIPVAFPAGDAI
SLSHSVVMYACNKNVDLAIQHGRKRPPGSALPRTKSALISYGGHGKAAPSSSLRLSIFTP
NVLMISKHADGSLNQWAVGFAEDSAFSTVLSVSHKSRYCGHRFHLNDLACHSLLPLLLTT
SHHNALRTPEADSILAPPDAYSSGFSHPAFLPRGSRPNRSSLGAVSQDPNAIYSELILWR
VDPVGPLSLSGGVSELARINSLHASAFAQVAWLPTFIPSSCLGMYCNSPSACFVASDGHS
LRMYQAVIEAKKLLSELSNPEISKYVGEVFNIISQQSTAKPGCIIELDTITDVQGKETQL
LHVFEEDLILGSERTASTQQTPDPPHTASSKAAYSARFFLVVVELTPTGRSLLHMWHLHL
AALPITMEDTAKQVDVTSASSLNSSTFSFDTFSSTVSQKSKPCTSNLQSACRLSLTTHRL
YSQEMALPEGVEAISVTPSAGHLSASCSLPADRVPYLLATSCSDGKVRFWRCVVNATEPS
GMDSLVYQWEEWPLLVEERLPNSSAVQVQGRPIVVSCCHSGRIAVAYKQMPTARLISTPY
LNSQLLTSPPTLASSPYVHNNNNNTHLTPTLTVQRSPNLSLSPNTASAVREPLVHIGIFQ
CESTGGSQWNLEQTIVLDSTDPTTGSANIPGSGDITVPNEDFPCSASKSLVHLDWVSQED
GSHVLTVGIGTKIYMYGRLSGKPPELGLTSDASREQSSSRLVLIRSVDLVSSVEGSLPIP
VSLSWVRDGILVVGMDCEMHVYSQWQPPAPIKPNAAMARDTDISSSVSSIISALRQSQED
GPTSGAPMSSLAPPKKALTRSMMSLAQKLSGKRTAYDLPIEMEDSGLFEAAHQLFPTLPQ
YHPVQLLELMDLGKVHRAKAILSHLVKCIAGEIVALKDSNTNPEKRVRSRTISAGGSTAR
DRKMFSKAENSGPDYTEISSIPPLPLYALLAADEDTSPKSDKVSSVGGDSGHGSSHTDVY
DELFHTPTVADLDPLEDDQEETGNKVIDLSQYSPTHFGPEHAQVLSSHLLHSSLPGLTRM
EQMSLMALADTIATTSTDLKDSQGTSKGGETLDECGLKFLLAVRLHTFLSTSLPPAHRAQ
LLRQGLSTCHYAWAFHSEAEEELLNMLPALQKGEPTWPELRSMGVGWWLRSTNKLRRCIE
KVAKTSLQRNNDPLDAAIFYLALKKKAVVWGLYRSQKNAKMTEFFRNNFSEDRWRKAALK
NAFSLLGKQRFQHSAAFFLLAGSLKDAVEVCIEKMQDLQLALVISRLYESEFEAASTYKK
ILRRHVLGQDKQILAHQDPFLRSMAHWVLEDYSRALDALLEQPANSIRCDAGSFSVSTCN
PEVFNFYTYLRTHPLLLRRHFGSSDKAKVGLTAECRRADSISLEERRLFFTAAHAHLQAG
CPMLALEVLSKMPKVRKHSEPPSQADTGSAAELSVGSKNGRTSNPGWSQPALNGYESDGN
SLSNSQSDSVLSFDWSQQSQTHTDEPLELKWDSDKDAEEEEEDDEDEEEAKHVDGSSVFR
DRRDAMSPLMETVMAEDREDDNDFLAPSNDILAAQLKFTACLKIMTNELRTLSTGYELDG
GKLRCQLYQWLEREVVALQRCCSYKPCLPELSVQGDAPVSGLAEEEQPGSPHGHSQRSRR
HWLQSNQPLLRMFLSYCSLHGSHGGGLASVRMELILLLQESHQDDSTQPAVVPCCQPTSI
PLLMACTANVKTVVANPIVYLTNLAHDILETINSLDSPPHPDVVNNEIYVMHTLAASLSA
CIYQCLCDGHTHSHVNRFTGIVYQSVLLSQKQPLRTVSMDESVQPNTSPAQWPGIASLIR
LLSSAGEESQPGLTVLLCEILTAVFLSLFVHGMATHSSNELFRIVAHPLNSKLWVAVFGG
GARTPVIEKLSSPTRTPPPASPSGSDRKSRRFRLLSRGGSRDEPATERDGPSSPKHGPVV
EQEAASIFKERFVPPELSIWDYFIAKPSLPPSEGRVEYDSEESQDSQDEEEDDDEYEDVF
NPSAPQREHSNHSSYSWCLMRLAMVQLVLVNLKSFYPMAGYDLLDLPVGSPLCHVVLKTL
QRWEQVLQKRLELFGGPPSKYISTLLQDETAAPGPALLRHKALFEPSNTPFRTSHHSALP
VKRLWQFLVKQEEVQETFIRNIFTKKRDPNESGEDQTDILKCSGMEETGNYQTESDQGST
GGKARIIHKESDIITAFAINKANRNCLVMASTHDIQELDVSSILATQILTWIDDEDAEVK
GVGGDDFLVVHARDDFAALHGTTPYTHSSPGTPINMPWLGGVQTGRGAAVMIKRNINNVR
RMTSHPTLPYYLTGAQDGSVRMFEWGHSQQIVCFRSPGNSRVTRIRFNHQGNKFGIVDAD
GGLSLWQTNTSGNAPKPYLTLQCHSKTAHDFVFVGSSSLIATAGLSTDNRNVRLWDTLVT
PANSLVHAFCCHESGATVLSMASRQQLLITGGRKGWISVLELAHRQQRQSFQAHDSPVKA
LAVDPTEDCFISGSAEGNIKIWSLATQCPLYTFPNEHARQSLFRNLGTGVMQIEVGPTNH
IFSCGADGTMKMRVLPDRFSVLNNNNHHGNLKNDVKFII
NT seq
9300 nt
NT seq
+upstream
nt +downstream
nt
atgaatctccatcaggtcctcacaggagctgtcaaccctggagacaattgtttctctgta
gggagcgtcaacaatgtgccattcacggcatatgcgtcaggatgcgacgtagtgattttg
ggcagtgactttgagcggctgcagatcatcccaggggccaagcatggcaacatccaggtc
tgctgtgtcgactgctcactgcagggtggacagattgcagcttcctatggaagcatcgtg
tgcgtctttgagccggttcagcatccagatcaaaaagacacttcactgactaagttgaac
tgccaatggcagaagacgggtcaatttgtattaaagtctatggtacggaacctggcctgg
caccccacaggcagtacgcttctaacaggctctagtagcctccagttatggtctaatgtt
gctggagaggaaggtgaagctgaggaagtgggaacgcagacagacatgacaattggagag
actcattctgcctggaggtgcatctggcagagcaagatggcatctcaagtcagtttaatg
aagttctctcccgatggggaattctttgctactgctggtctggatgactgcctggtgaag
gtctggtacaacaccagtaagtggaagttgggtgtttccagactcttcacacctccagag
ccaagtgactctttccagggagagctggccttctcctttgtgtacctggcccatccccgt
tcggttactggcttctcatggaggaagaccagcaagtacatgccacgcggcgcagtgtgt
agtgttctgctcacctgctgtaaggacagcgtgtgtcggctctgggcagagacgctctta
ccgggcgacggccttctgtctggttaccataacaaccacgcttcttcccgacacggtgac
gcaccaggatgtgccggtgcatctggcaacacctgcaatgggaagttgcagggaagaaca
gcacaagaattgaactttcaagcatcattgcgcggctcttcttaccgggacgtcccacag
ccctccatgattggcggcctgcctcaacatcagagcaggcactacaaccacaaggggagc
cgcagcagcacgccgcacgccaacgctctctgccacttccacattgctgccagcatcaac
cctgccacagacattcctctgctgccctccatctcctctctgagttccgtggatgacgag
gaacctggaggtccgttcactgtccactggctcaacaacaaagagcttcatttcacttta
gcgatggaggtcttcttgcagcagctccgaggcagcctggagatccaggacgactgcccc
cgtgaagtgcctgaagatgaggataactttgatgaggaagataatagcagcaggcccagt
gactcccggggacccgaggctgcagagcttcctctggcagcggtgaagcaccaggtggac
gtgctgttagaggagtggaataaaggggcagacatgttgttcagtatccatcccatggac
ggctctcttttagtctggcatgtcgactggttggatgaataccagccgggcatgttcaga
caagctcaggtgtcgttcgtctcccgcatacctgtagcgttcccggcgggcgacgcaatc
tccttgagccacagtgtggttatgtatgcctgcaacaagaacgtggatctggccatccaa
catggcaggaagcggccacccgggagcgcattgcctcgaaccaagtctgcgctcataagc
tatggaggccatggaaaagctgcacccagcagtagtctaagactcagcattttcaccccc
aacgtcctcatgatttccaaacacgccgacggctccctgaaccagtgggccgtcggcttc
gcagaggactccgctttctccactgtgctcagcgtctcgcacaagtcaaggtactgtggc
caccgcttccacctcaatgacttggcctgtcactcgctgctgcctctgctcctcaccacc
tcgcaccacaacgccttgaggacgccagaggcagacagcatcctggctcctccggacgcc
tactcctccggtttctctcatccagcatttctgccccggggatcacgacccaaccggagt
tccctgggtgcagtgtcccaggaccctaacgcaatctacagtgaactaattttatggaga
gttgaccccgtcgggccgctttctttgtctggcggggtctccgagctagctcggatcaat
tccctccatgcatcagcgtttgctcaagttgcctggctgcccacatttattcccagcagc
tgtttaggtatgtactgtaactctcccagtgcctgcttcgtggcaagcgacggccactca
ctcaggatgtatcaggctgttattgaagctaaaaaactcctgagtgagctctccaatcca
gagatatcaaaatatgttggagaggtgtttaacatcatcagtcagcaatccacagcaaaa
ccaggatgtattatagagctggataccattactgacgttcaggggaaggagacccagctc
ctgcatgtgtttgaagaggatctgattctcggcagtgagagaacagcgagcacacagcaa
actcctgatccccctcacactgcctcaagcaaggcggcgtactctgcacgttttttccta
gttgtggtcgaattgaccccgacgggtcgctcgctcctccacatgtggcatctccatctt
gctgctctacccatcaccatggaagataccgcaaagcaggtggatgtgacctcagcttcc
tctctgaacagctctacgtttagctttgacacgtttagttctacagtcagtcagaagagt
aaaccctgcacttccaatctgcaaagtgcctgtcgcctcagcctcaccacgcacaggctg
tacagccaagagatggctctgcctgaaggggtggaagccatcagtgttacaccctcagca
ggccacttgagcgcgtcatgttctctgccagctgatcgtgtgccctacctccttgccact
tcctgttctgatggaaaggtgcgcttctggaggtgtgttgttaatgcgacagagccttcc
ggtatggacagcttggtttaccagtgggaggagtggcccctgctggtggaggagaggctc
cccaacagcagcgcagtgcaggtgcaaggtcgtcccatagtggtcagctgctgccactcc
gggcggattgcagttgcctacaagcagatgccaaccgcacgtctgatttcaacaccttac
ctaaactctcaactgttgacgtcccctcctaccctggcttcctccccttatgtgcacaac
aacaacaacaacactcacctgacaccaaccctgactgtacagcgtagcccaaatctctct
ctaagccctaacacagcaagtgctgtgagagagcctttggtccacattggcatcttccag
tgcgagtccactggtggttcacagtggaatctagagcagaccatagtcctggacagcacg
gatcccacaaccggaagtgccaatattccaggtagcggagacatcactgtccccaacgag
gacttcccttgttcggccagtaagagcctggttcatttggactgggtgtcccaagaagat
gggtcacatgttctgaccgtcggtattgggacaaagatttatatgtacggccgtctttcc
gggaagcctccagaactcggcttgacatccgatgccagccgagagcagagctcatcgcgc
ctggttctgattcgatcagtggacctggtctcctctgtcgaaggctcgttacccattccc
gtctccctctcctgggtgagagatggaatcttggtagtcggcatggactgtgagatgcac
gtctactcccagtggcagcccccagcaccgatcaaacccaatgccgcgatggcccgagac
accgacatcagcagcagcgtctcctctataatctcagctctcaggcagagccaggaggac
ggccccacctccggggcccccatgtcttcacttgcccctcccaaaaaggccctgacgaga
tcaatgatgagcctggctcaaaaactcagtgggaagagaaccgcttatgacctacctatt
gagatggaggactctgggcttttcgaagcagctcatcaactctttcccactctgcctcag
taccatcctgtgcagttactggagctcatggatctagggaaggtgcaccgtgccaaagcc
atcctgtcccacctggtgaagtgcattgccggagagattgtggcacttaaagacagtaac
accaatcctgagaaacgtgtgcgctctcgaacaatcagcgctgggggaagcacagctagg
gatcgcaagatgttcagcaaagcagagaactccggccctgactacacggagataagctcc
atccctccactgcctctgtacgccctgctggcagccgatgaggatacgtcaccaaaatct
gataaagtgagcagtgttggtggagacagtggacatggttccagtcacactgatgtttat
gatgagctctttcatacacccaccgttgcggacctggaccccctggaagacgatcaggag
gaaacggggaacaaggtcattgacctgtcccagtacagtccgacacactttggtccagaa
catgctcaggttctgtccagtcacctccttcattccagtttgccgggcttgacccgtatg
gagcagatgtctctcatggcgctggctgacaccatcgctaccacaagcactgacctcaag
gacagccagggcacaagcaaaggtggagagacgctggacgagtgtggtctgaagttcttg
ctggccgtccgactccacaccttcctctctacctccctgcctccagcacaccgcgcacag
ctgctgcgacaaggcctgtcgacgtgtcattacgcctgggccttccactctgaggctgaa
gaggagctgctgaacatgctgcccgccctacagaagggagagcccacctggccggagctg
cgctccatgggcgtgggctggtggctgcgcagcacaaacaagctacgcaggtgtattgag
aaggttgccaagacgtctttacagagaaacaatgatcctcttgatgcagctatattttac
cttgcactgaagaaaaaggcagtggtctggggattatacaggtctcagaagaatgccaaa
atgacagagttcttccgcaacaacttcagcgaggaccggtggaggaaagcggcgttgaaa
aatgcgttttctctgttgggaaagcagcggtttcagcattctgcagccttcttccttctc
gccggctcccttaaggatgctgtggaggtgtgtatagagaaaatgcaggacctacagctt
gccctggtgatctccagattgtacgagtctgagtttgaggcggcgtccacctacaaaaag
atccttcggcgacatgttctgggacaagacaaacagattctagcccaccaggacccgttc
ctacgcagcatggctcactgggtcctagaggactacagcagagccttggacgctctactt
gagcagccggcaaacagcatcagatgtgacgcaggttccttttcggtgtctacgtgcaac
ccggaggttttcaacttttacacctaccttcgaacccacccactcctcctccgtcggcat
tttggctcctcagacaaggcgaaagttggactgacggctgagtgccgcagggctgactcg
attagcctggaggagaggaggctgtttttcacagctgcacacgcgcacctgcaagccggc
tgccccatgctcgcacttgaagtcctctccaagatgcccaaagtccgcaagcactccgag
ccgcccagccaggcggatacaggctcggctgctgaactcagtgttggcagcaagaacgga
cgaacatccaacccgggttggtctcagccggctctgaacggctacgagtcggacggaaac
agcttatccaatagccaatcggattctgtgttaagttttgactggagccagcagtcacag
acgcatacagatgagcccctggagcttaagtgggacagtgacaaagacgcagaagaagaa
gaagaagatgatgaggatgaagaagaagctaaacatgtagacggcagcagtgtgttccgg
gacagacgggatgccatgtcgccgctaatggagaccgtgatggcagaggaccgcgaggac
gacaatgacttcctggctccgtctaatgacatcttggcggcccagctgaagttcacagcc
tgcctgaagattatgaccaacgagctccggacgctgtcaaccggttatgaactggatgga
gggaagctacgttgccaactctaccagtggttggaaagagaggtggtggctctccagcgt
tgctgcagctacaagccctgcttgccagagctgtctgtccagggtgatgctcccgtttct
gggttggcagaggaggaacagcctgggagtcctcatggtcacagccagaggagcaggaga
cactggctgcagagtaaccaacccttactgaggatgttcttgagctactgcagcttgcac
ggctcccacggtggaggactggcctctgtgcgcatggagctcatattattgcttcaagag
tctcaccaggatgactccactcagccagcggtggtgccgtgttgtcagccaacatctatt
cctctcctgatggcttgcacggccaacgtgaagaccgtggtcgccaaccccatcgtctac
ctgaccaacctggctcatgacatcttggagaccatcaattcactcgactctcctccacat
ccggatgtggtgaacaacgagatctacgtgatgcacacactggctgcctccctgtcagcc
tgtatatatcagtgtctgtgtgatggacacacccacagccatgtgaaccgtttcacagga
atcgtgtatcagagtgtgctgctgtctcagaagcagcctctcagaactgtcagtatggat
gagtctgttcagcccaacacttcccctgcacagtggccaggtatcgcctctctgattcgc
ctgttgagctcggcgggcgaggagagccagccgggcttaactgtgctgctctgcgagatc
ctgactgctgtcttcctcagtctgtttgttcacggcatggccactcactccagcaacgag
ctgtttcgcatcgtggctcatcccctcaacagcaagctctgggtggcggtgttcggcgga
ggcgcccggacccctgtcatcgagaaactcagcagcccaacaagaacacccccgccagcc
tcaccgagcggctcggacagaaagtccagacgattcaggctcctgtcccgcggtggctcc
agggacgagcctgcgacggagcgggatggcccatccagtcccaagcacggtcctgtagtg
gaacaagaagctgcctccatctttaaagaacgatttgtccctccagagctcagcatttgg
gattactttattgccaagccttcgctgccaccatcggaaggcagagtagaatatgactcg
gaggagagccaggacagtcaggatgaagaggaagatgatgatgaatatgaagacgtcttt
aaccccagcgctccccaaagggagcattcgaaccacagttcatacagttggtgtttgatg
cgactggctatggttcagcttgtgttggtcaacctcaagtccttctacccaatggcagga
tatgatctgttagatctgcctgtgggctctcctctttgtcacgttgtgctgaagacgctg
cagcgatgggagcaggtgctacagaaaaggctggagctcttcgggggccccccttccaag
tacatctccaccctcctccaggatgaaacggctgcaccgggccccgccctgctcagacac
aaggccttgtttgaaccgtctaacaccccgttcagaacaagccaccattcagcactgccc
gtgaagcgtctctggcagtttctggtcaagcaggaagaagtgcaggagactttcattaga
aacatctttaccaagaaacgggaccccaatgagtcgggtgaggaccagactgacattttg
aaatgttcagggatggaggagacaggaaactatcagactgagtcagaccagggctccacc
ggaggaaaggcacgcatcatccacaaggagtctgacatcatcaccgcctttgccatcaac
aaggcaaaccgtaactgtttagtcatggcctccacccatgacattcaggagttggatgtg
tcatccatcttggccacacagatcttgacatggatcgatgacgaggatgcagaagtcaaa
ggtgttggcggtgatgacttcctggtggtgcatgcgcgggatgactttgccgccctccac
ggcaccacaccgtacactcacagtagccccggcacgcccatcaacatgccgtggctggga
ggggtgcagacgggccggggtgcagctgtgatgatcaagagaaacatcaacaatgtgaga
agaatgacctcccatcccacgctgccttactacctgacgggcgctcaggacggcagtgtc
aggatgttcgagtggggtcactcccagcagatcgtctgcttcagaagtccaggcaactcc
agagtgaccaggatacgattcaaccaccaggggaacaagtttggtatcgtggacgcggac
ggcggtttgagtctctggcagaccaacacgagcggcaacgcgcccaaaccgtacctgacg
ctgcagtgccacagcaagacggctcacgacttcgtcttcgtgggctcctcctccctcatt
gccaccgcggggctttcaacagacaacaggaacgtgcgtctgtgggacactctggtaacg
cccgccaacagcctcgtccatgctttctgctgccacgagtccggagcgaccgtgctctcg
atggcctccaggcagcagctgctcatcacgggtgggaggaagggctggatcagcgtcctg
gagctcgcccacaggcagcagcgccagagcttccaggcccacgactcgcccgtcaaagcc
ctggctgtggatcccaccgaggactgcttcatcagcggatcggctgagggcaacattaag
atctggagcctggccacgcagtgtccgctctacaccttcccaaacgaacacgctcgccag
tcattgttcaggaacctgggcacgggcgtcatgcagatcgaggtggggccgaccaatcac
atcttctcctgcggcgccgacggcaccatgaagatgcgggtcctccccgaccgcttcagc
gtcctgaacaacaacaaccaccacggcaacctcaagaacgacgtcaagttcatcatatag
DBGET
integrated database retrieval system
