Clinocottus analis (woolly sculpin): 137805459
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Entry
137805459 CDS
T10471
Name
(RefSeq) rab5 GDP/GTP exchange factor-like
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
137805459
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cana04131
]
137805459
Membrane trafficking [BR:
cana04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
137805459
Protein recycling
Other Rab GTPase associated proteins
137805459
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
zf-A20
DUF5601
Usp38-like_N
Motif
Other DBs
NCBI-GeneID:
137805459
NCBI-ProteinID:
XP_068461505
LinkDB
All DBs
Position
Unknown
AA seq
468 aa
AA seq
DB search
MWTDKQRGIRVSQELLCKNACGYYGNPAWQGFCSKCWREKARPAAASRQDARPSHDGTPL
TFSKFEEKKSTEKGRRINTMRRLFWGSPSPPKPQESSERHANVLKPYQSLEPGDFTGFLK
LLKSPSSQRLQSRCTAFLNTMEAYHDLPVQKQSDLVQDFFQSFAEYFSSFPEAQVTQIME
HVEKLIMTRLHKWVFCHDSCDDEQKDLALQRRIRSLNWITPQMLSVPFPDKTTAVTGDPF
LSAITAIIEMDAKRAPQDKLACVSKCSQHVFEALSTSNSEPANADDFLSALVYVVLKANP
PRLHSNMQYVIRFGLPHSLMAGESGYYFTNLSCAVAFIEKLDGPALNLSPAEFEGYMLRQ
RAPSEGKRQQVASDTQHMFEELKGRQEKLDQGMDALNVQLQTWVTAVHSQLDEATAQFAL
VQKEMAAQGELLQVSSSSSHGAASEEDDKDESVLVLMDQHAGTQDTDC
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgtggacagacaagcaaagaggaatcagagtctctcaggagctgctctgcaagaacgcc
tgtggctattatggaaaccctgcgtggcaaggcttctgctccaagtgctggagagagaag
gcccggccagctgcagcctcgaggcaagacgcaaggccaagccatgatggaactcctctc
accttctccaaatttgaggagaagaaaagcacagagaaaggtcgtcgaatcaacacaatg
aggagactcttctggggaagcccatcgcctcctaaacctcaagagtcttctgaaaggcat
gcgaatgtgttgaaaccttatcaaagcctcgagcccggggacttcactggtttcctgaag
ctactaaagagcccttcctctcagcgcttgcagtcccgttgtacggctttcctcaacaca
atggaggcgtaccatgatctgccggtacagaagcagtccgatcttgtgcaggatttcttc
cagtcgtttgctgaatattttagcagttttcctgaggctcaggtcactcagataatggag
cacgtagagaagttaataatgacacggttgcacaaatgggttttctgccatgacagctgt
gacgatgaacagaaagatcttgctctccagaggaggatacgatctttgaactggatcact
ccgcagatgctgagcgtcccttttcctgataagacgacggcagtcaccggcgaccccttt
ctctcggctataacagctataattgaaatggatgccaaacgagcgcctcaggacaaactt
gcatgcgtgtccaaatgcagtcagcatgtctttgaggcgctctccacctccaacagtgag
cccgctaatgccgacgacttcctgtccgctttggtttatgtggtgctgaaggccaatcct
cctcgcctccactccaacatgcaatatgtgattcgttttggtctccctcacagtctgatg
gcaggagagagcggctactatttcacaaatttgtcttgtgcagtggccttcatcgagaag
ctggatggaccagcactcaacctcagtccagcggagtttgagggctacatgctgcgtcag
cgggctccttctgaaggaaagaggcagcaggttgccagcgacacacaacatatgttcgaa
gagctaaaaggccgacaggagaagctggaccagggcatggatgctctcaacgtgcagcta
caaacttgggtcacagccgttcattcacaactggatgaggcaacagcccagtttgctctg
gtacagaaggagatggccgctcagggcgagctcttgcaggtttcgtcatcttcatctcat
ggtgcagcgtcagaagaagatgacaaagacgagtctgtcctggtgcttatggatcaacat
gcaggaacacaagatacagactgttag
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