Colobus angolensis palliatus (Angola colobus): 105502262
Help
Entry
105502262 CDS
T08744
Symbol
RTCB
Name
(RefSeq) tRNA-splicing ligase RtcB homolog
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
cang
Colobus angolensis palliatus (Angola colobus)
Brite
KEGG Orthology (KO) [BR:
cang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cang03016
]
105502262 (RTCB)
Enzymes [BR:
cang01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
105502262 (RTCB)
Transfer RNA biogenesis [BR:
cang03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
105502262 (RTCB)
Prokaryotic type
tRNA splicing ligases
105502262 (RTCB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
Cu-oxidase_4
Motif
Other DBs
NCBI-GeneID:
105502262
NCBI-ProteinID:
XP_011784049
Ensembl:
ENSCANG00000001891
LinkDB
All DBs
Position
Unknown
AA seq
478 aa
AA seq
DB search
MSRSYNDELQFLEKISKNCWRIKKGFVPNMQVEGVFYVNDALEKLMFEELRNACRGGGVG
GFLPAMKQIGNVAALPGIVHRSIGLPDVHSGYGFAIGNMAAFDMNDSEAVVSPGGVGFDI
NCGVRLLRTNLDESDVQPVKEQLAQAMFDHIPVGVGSKGVIPMNAKDLEEALEMGVDWSL
REGYAWAEDKEHCEEYGRMLQADPNKVSARAKKRGLPQLGTLGAGNHYAEIQVVDEIFNE
YAAKKMGIDHKGQVCVMIHSGSRGLGHQVATDALVAMEKAMKRDKIIVNDRQLACARIAS
PEGQDYLKGMAAAGNYAWVNRSSMTFLTRQAFAKVFNTTPDDLDLHVIYDVSHNIAKVEQ
HVVDGKERTLLVHRKGSTRAFPPHHPLIAVDYQLTGQPVLIGGTMGTCSYVLTGTEQGMT
ETFGTTCHGAGRALSRAKSRRNLDFQDVLDKLADMGIAIRVASPKLVMEEVSEILINT
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgcagctataatgatgagctgcagttcttggaaaagatcagtaaaaactgctgg
aggatcaagaagggcttcgtgcccaacatgcaggttgaaggcgttttctacgtgaatgat
gctctggagaaattgatgtttgaggaattaaggaatgcctgtcgaggtggtggtgttggt
ggcttcctgccagccatgaaacagattggcaacgtggcagccctgcctggaattgttcat
cgatctattgggcttcctgatgtccattcaggatatggatttgctattgggaacatggca
gcctttgatatgaatgactctgaagcagtggtatccccaggtggtgtcgggtttgacatc
aactgtggtgtccgcttgctaagaaccaatttagatgaaagtgatgtccagcctgtgaag
gagcaacttgcccaagctatgtttgaccacattcctgttggggtgggatcaaaaggtgtc
atcccaatgaatgccaaagacttagaggaggccttggagatgggggtggactggtcctta
agagaagggtatgcctgggctgaagacaaggagcactgcgaggagtacggaaggatgctg
caagctgaccccaataaggtttctgcaagagctaagaaaagaggccttcctcagctgggg
accctgggagcaggcaaccattatgcagaaatccaggttgtggatgagattttcaatgag
tacgctgctaaaaaaatgggcatcgaccataagggacaggtgtgtgtgatgatccacagt
ggaagcagaggcttgggccaccaagtagccacagatgcactggtagctatggagaaggcc
atgaagagagacaagattatagtcaatgatcggcagttggcttgtgctcggatcgcttcg
ccagagggtcaggactacctgaagggaatggcagcggctgggaactatgcctgggtcaac
cggtcttccatgaccttcttaacccgtcaggcttttgccaaggtcttcaacacaacccct
gatgacttggacctgcacgtgatctatgatgtttctcacaacattgccaaagtggagcag
catgtagtggacgggaaggagcggacactgttagtacacaggaagggatccacgcgcgct
ttccctcctcaccatcccctcattgctgttgattaccaactcactggacaaccagtgctc
attggtggcaccatgggaacctgtagttatgttcttactggcactgaacagggcatgact
gagacctttggaacaacctgtcacggagcgggccgtgcattgtcccgagcaaaatctcga
cgtaatttagatttccaggatgttttagacaaattggcagatatgggaattgcaatccgt
gttgcctcacccaaactggttatggaagaggtaagtgaaattctgataaatacatga
DBGET
integrated database retrieval system
