Colobus angolensis palliatus (Angola colobus): 105504143
Help
Entry
105504143 CDS
T08744
Symbol
SETX
Name
(RefSeq) probable helicase senataxin
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
cang
Colobus angolensis palliatus (Angola colobus)
Pathway
cang05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
cang00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
105504143 (SETX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cang03021
]
105504143 (SETX)
Enzymes [BR:
cang01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
105504143 (SETX)
5.6.2.5 RNA 5'-3' helicase
105504143 (SETX)
Transcription machinery [BR:
cang03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
105504143 (SETX)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
AAA_19
UvrD-helicase
AAA_30
AAA_22
nSTAND3
NAT10_TcmA_helicase
SLFN-g3_helicase
ResIII
AAA_16
UvrD_C_2
Motif
Other DBs
NCBI-GeneID:
105504143
NCBI-ProteinID:
XP_011786821
Ensembl:
ENSCANG00000040373
UniProt:
A0A2K5JX62
LinkDB
All DBs
Position
Unknown
AA seq
2620 aa
AA seq
DB search
MSTCCWCTPGGGSTVGFLKRYASNTPSSEFQTANEDLCYCLECVAEYHKARDELPFLHEV
LWELETLRLINHFEKSMKAEIGDDDELYIVDNNGEMPLFDITGQDFENKLRVPLLEILKY
PYLLLHERVNELCVEALCRMEQANCSFQVFDKHPGIYLFLVHPNDMVRRWAILTARNLGK
VDRDDYYDLQEVLICLFKVIELGLLESPDIYTSSVLEKGKLILLPSHMYDTTNYKSYWLG
ICMLLTILEEQAMDSLLLGSDKQNDFMQSILHTMERQSDDDSVDPFWPALHCFMVILDRL
GSKVWGQLIDPIEAFQTIINNASYNREIQHIRNSSVRTKLEPESYLDDMVTCSQIVYNYN
PEKTKKDSGWRTAICPDYCPNMYEEMETLASVLQSDIGQDMRVHNSTFLWFIPFVQSLMD
LKDLGVAYIVEVVHHLYSEVKDVLNQTDAMCDKVTEFFLLILVSVIELHRNKKCLHLLWV
SSQQWVEAVVKCAKLPTTAFTRSSEKSSGNCSKGTAMISSLSLHSMPSNSVQLACVQLIR
SLLKEGYQLGQQSLCKRFWDKLNLFLRGNLSLGWQLTSQETHELQTCLKQIIRNIKFKAP
PCNTFVDLTSTCKTSLAPYNREESERIGKKSRKDMHYLEASSPTFSKEPMKVQDSVLIKA
DNTIEGDNDEQNYIKDVKLEDQLSAGSCFKQSSENMFTERAEDEIKISTRKQKSVKGNFS
YTPEDCTSKNGPERGCDRGIIVLTRLLTDSSTDALEKVSTSNEDFSLKDDALGKTSERKT
KVQKDEICAKLSHVIKKQHRKSTLVNNTINLDENLTVSNIESFYSRKDTGVQKGDGFIHN
LSLDPSGVLDDNKNGEQKSQNNLLPEEKQLKNEELDIFYSHENNCEIQEFHVDDKDSIPF
TEMANTSEKISSFKDLLTVPESRDEAISNSTNVIYSNLTREQAPGISPKSDTLTDSQIDR
DLHKLSLLAQASVITFPSDSPQNSSQLQRKGKEDKRCFTANKNNVGDASRGQVIIISDSD
DDDDERILSLEKLTKQDKRRLEKERPEQHISTVKEAKNPVKEEKTKSLFQFEEFDSQCFE
FESASEVFSVWQDHLDNNNSVQDGEKKCLTPIANTTNGQDCTDYVPEVVKKGAEGIEEHT
RPQSSSISVEEFCEIEVKKPKRKRSEKPIPEDPVRPSSSVRNEGQSGTNKRDLVGNDFKS
IDRRTTTPNSRIQRATTVSQKKSSKLCTYTEPVRKVPVSKTPKKTHSDAKKGQNRSSNYL
SCRTTPAIVPPKKFRQCPEPTSTVEKLGLKKGPRKAFELSQRSLDYVAQLRDHGKTVGVV
DTRKKTKLISPQNLSVRNNKKLLTSQELQMQRQIRPKSQKNRQRLSGCESTDATRAGPHT
AQNSDTFVPESDRSDYDCTGGTEVLANSNGKQLIKCVPSEPETIKAKHGSPATDGACPLN
QCDSIMLNGTIPTSEIIVSISEDPLGGGDPTAHHTDMATLNEVEPDSSSDTEEDNLFLTQ
NDPEDMDLCSQMENDNYKFIELIHGKDTVQVEEDSVSQPQLESLSGTKCKYKDCLETTKN
QGEYCPQHSEVKAADEDVFRKPGLPPSASKPFRPTTAKIFSSKSTSRIAGLSKSLETSSA
LSPSLKNKSKGIQSILKVPQPAPLVAQKPVGEVKNSSNVFHPQSPNNSNRQGCKVPFGES
KYFPSSSPVNILLSSQSVSDTFVKEVLKWKYEMFLNFDQCGPPASLCQSISRPVPIRFHN
YGDYFNIFFPLVVMNTFETVAQEWLNSPNRENFYQLQVRKFPADYIKYWEFAVRNGKAEC
YLSIQTQENFPANLNELVNCIIISSLITTQRKLKAMSLLGSRNQLARAVLNPNPMDFCTK
DLLTTTSERIIAYLRDFNEDQKKAIETAYAMVKHSPSVAKICLIHGPPGTGKSKTIVGLL
YCLLTENQRKGRSDENSNAKIKQNRVLVCAPSNAAVDELMKKIILEFKEKCKDKKNPLGN
CGDINLVRLGPEKSINNEVLKFSLDSQVNHRMKKDLPSHVQAMHKRKEFLDNQLDELSRQ
RALCRGGREIQRQELDENISKVSKERQELASKIKEVQGRPQKTQNIIILESHVICCTLST
SGGLLLESAFRGQGGVPFSCVIVDEAGQSCEIETLTPLIHRCNKLILVGDPKQLPPTVIS
MKAQEYGYDQSMMARFCRLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYIYNRNL
KTNRQTETIRCSSDWPFQPYLVFDVGDGSERRDNDSYINVQEIKLVMEIVKLIKDKRKDA
SFRNVGIITHYKAQKTMIQKDLDKEFDRKGPAEVDTVDAFQGRQKDCVIVTCVRANSVQG
SIGFLASLQRLNVTITRAKYSLFILGHLRTLMENQHWNQLIQDAQKRGAIIKTCDKNYRH
DAMKILKLKPVLQRSLTHPPTTAPEVSRPQGGLPSSKLDSGFAKTSFAASLYHTPSDSKE
TTLTVTSKEPERPPVHDQLRDPRLLKRMGIEVKGGIFLWDPQPLSPQHPGATPPAGEPSF
PVVHQDLGHVQQPAAVVAALSSHKPPVQGEPPAASPEASTCQSKCDDPEEELCHRREARA
FSEGEQEKCGSETPHTRRNSRWDKRRLEQEDSSSKKRKLL
NT seq
7863 nt
NT seq
+upstream
nt +downstream
nt
atgagcacatgttgttggtgtactccaggtggtggttccaccgttggcttcctaaagcgc
tatgcttccaacactccatccagtgaatttcaaacagccaacgaagacctctgctactgc
ttagagtgtgtggcggaataccacaaagcaagagatgaattgccattcttgcatgaggtt
ttatgggaattagaaaccttacgtctgataaatcactttgaaaaatccatgaaggcagaa
attggagatgatgatgagttatatatagtagacaacaatggagagatgccactgtttgac
atcactggacaagactttgaaaataagcttcgagttcctcttcttgaaatactgaaatat
ccttatttgcttctacatgaacgtgttaacgagttatgtgttgaagcactttgtcggatg
gaacaagccaattgctcctttcaggtgtttgacaaacatccagggatctatttgtttttg
gtccatcccaatgatatggttcggcgttgggctatcttgactgcaagaaacttggggaaa
gtggacagagatgattattatgacttacaagaagttttaatttgcctttttaaagtcatt
gagttgggacttctagagagtccagacatttatacttcttctgtcctagagaagggtaaa
ctaattcttctgccctcacacatgtatgatactaccaactacaaaagctattggttaggt
atttgcatgttgctgaccattcttgaggaacaagccatggattccctattgttgggctca
gacaaacaaaatgattttatgcaatcgatacttcacactatggagaggcagtcagacgat
gatagtgtggatcctttctggccagcattacactgttttatggtgattctggaccgcctt
ggatctaaggtctggggtcagcttattgatcctattgaggcatttcaaaccattatcaac
aatgcaagctacaatagagagattcagcatatacggaacagctctgtaaggaccaagtta
gaaccggagtcgtatttggatgatatggtgacttgcagccagatcgtatacaattataat
cctgaaaagaccaaaaaggattctggatggagaacagccatttgcccagattattgtcct
aacatgtatgaagaaatggaaacattagccagtgtgcttcagtcagatattggtcaagac
atgcgtgttcataacagcacatttctgtggttcatcccttttgtccagtccctcatggat
cttaaggatttgggtgtggcttacatagtagaggttgttcatcatctatactctgaagtc
aaagatgtcctcaaccaaacagatgccatgtgtgacaaagtcactgaattttttcttcta
attttggtatcagtgattgaactgcatagaaataaaaaatgtttgcatttgctgtgggta
agttcccagcaatgggtagaagctgtcgtcaaatgtgccaagcttcctactactgcattt
acacggagttctgagaaatcatctggaaattgctccaaaggaacagcaatgatatcatca
ctctcgttgcattccatgccatctaactctgtacaacttgcttgtgtgcagctgattaga
agtctccttaaagaaggttatcagcttgggcagcaatctctttgcaagcgattctgggat
aagctcaacttattccttagaggaaatttatctctaggttggcagttgactagtcaggaa
acccacgagctacaaacttgtttaaagcaaattattagaaacataaaattcaaagcacct
ccatgtaacacttttgtggatctgacttctacatgtaaaacctctctggcaccttataat
agagaagaaagtgaacgaatagggaagaagtctagaaaagatatgcattatttggaagct
tccagcccaacattttctaaagaaccaatgaaagtgcaagacagtgtattgatcaaagca
gataacactatagaaggtgacaatgatgagcaaaattatataaaggatgtgaaactagaa
gaccagctctcagctgggtcatgcttcaagcagagtagtgaaaacatgtttactgaaaga
gctgaagatgaaattaaaataagtacaaggaagcagaagtctgtaaaagggaacttctca
tatacaccagaggattgtacttcaaaaaatggtccagaaaggggatgtgacagaggaata
atagtattaacacgtttgttgactgattctagcactgatgctttggaaaaagtgtccaca
tcaaatgaagatttctctttaaaggatgatgctcttggtaaaacctcagaacgaaaaact
aaggtacagaaagatgaaatctgtgcaaagttatcacatgtaataaagaaacaacacagg
aagagtactttggtcaataatactatcaatttagacgaaaatttgactgtatctaacatt
gagagtttctattcaaggaaagatacaggagttcagaaaggagatggtttcatacacaat
ctttctttagaccctagtggtgttctggatgataataagaatggagaacaaaaatctcaa
aacaatttattgccagaggagaagcaattaaagaatgaagagttagatattttctattcc
catgaaaacaattgtgaaatacaggaatttcatgttgatgataaagattcgatccccttt
acagaaatggccaatacttcagagaagatatcttcctttaaagatcttttgactgtacct
gaatcaagagatgaggcgataagtaatagtaccaatgtgatttattctaacttgacaaga
gaacaggcccctggcatcagtcctaaatctgacaccttaacggattctcagatagacaga
gaccttcacaaattatctttactagctcaagccagtgttattacgtttccatctgattcc
cctcagaactcatcccagctacaaaggaaaggaaaagaagataaaagatgtttcacagct
aacaaaaacaatgttggagatgcctcccggggacaggtgattattatttcagattctgac
gatgatgatgatgaaagaatcctgagtcttgagaaactcactaaacaggacaaaagacgc
cttgagaaggaacgtccagagcagcacatttcaacagttaaggaggcaaagaatccagta
aaggaagaaaagacgaagtctctttttcagtttgaggaatttgattctcagtgttttgag
tttgaaagtgcatctgaagtgttctctgtttggcaagatcatctagacaataataattca
gttcaagatggtgagaaaaaatgtttgactcctatagccaataccacaaatggtcaggat
tgtacagattatgtacctgaagttgttaaaaaaggggcagagggcattgaagaacacaca
agaccacagagcagtagtatttctgttgaggaattttgtgaaattgaagtaaaaaagcct
aagagaaaacgatctgaaaaaccaattcctgaagatcctgtgaggccttcatcttctgtc
agaaatgagggccagtctggtactaataagagagatcttgttggaaatgattttaaaagt
atagatagaaggactacaactcccaattcaagaattcagagagccactacggtttcacaa
aagaaatcttcaaagctttgtacttacacagaacccgtcaggaaagttccagtttctaag
acccctaagaaaactcattcggatgccaaaaaaggacagaatagaagttcaaattacctc
agttgtaggacaactcctgctatagtgccaccaaagaaatttcgtcagtgtcctgaacca
acttcaacagttgagaaacttggcctgaaaaagggtcctcgtaaggcatttgagttgtcc
cagcgatctttggattatgtagctcagttacgtgatcatggcaaaactgttggagtagtt
gatactcgaaaaaagactaaattaatttctcctcagaacctgtctgtcagaaataataag
aaactgctgactagtcaagaacttcagatgcaaaggcagatcagacccaaatcacaaaaa
aatagacaaagactttctggttgtgaaagtacagatgctacaagagcagggcctcataca
gcacagaattctgacacatttgtaccagaatctgataggtcagattatgattgtacagga
ggaactgaggtacttgccaacagtaatggaaaacagttaataaaatgcgtgccttctgaa
ccagaaaccataaaagcaaaacatgggtctccagcgactgatggtgcttgccctttgaac
cagtgtgactctataatgttaaatggaacaataccaacaagtgaaataattgtctctatt
tcagaggaccctctggggggaggtgatccgacagcacatcatacagacatggcaactttg
aacgaggtagagcctgactccagcagtgatacagaggaagataacttattcttaacacaa
aatgatcctgaagatatggatttatgttcacaaatggagaatgacaattataaattcatt
gaactaattcatggaaaagatacagttcaggttgaagaagattctgtaagtcagcctcag
ttggaatctttgagtggcacaaagtgtaagtacaaagattgtcttgaaaccacaaaaaac
cagggtgaatactgcccacaacactctgaagtgaaagcagcagatgaagatgtatttcgt
aaacctggtttgcctccttctgcatctaaacctttcagacctaccactgctaagattttt
agctcaaagagtacttcacgaattgctggtctttctaaatctttggaaacttcttcagca
ctttcaccatctctaaaaaataagtcaaaggggatacagtcgattttgaaagtaccacag
ccagctcccctcgtagctcagaagccagtgggtgaagtgaaaaattcgagcaacgttttt
catcctcagtctccgaataattccaacaggcaaggttgcaaagttccatttggtgaaagc
aaatattttccatcttcctctccagtaaacattctcttgtcatcacagtctgtctctgac
accttcgttaaagaggtcttaaaatggaaatatgaaatgtttttgaactttgatcagtgt
gggccccctgcaagtctttgtcagtccatctcaagacctgtgcctatcagatttcacaat
tatggagattattttaatatctttttccctttggtggtaatgaatacttttgaaacagtg
gcgcaggaatggctcaactctccaaatagagagaatttctatcagttgcaagtacgaaaa
tttcctgctgattatataaaatactgggagtttgcggtgcgtaatgggaaagctgagtgt
tacctttccatccagactcaagagaattttccggccaatttaaacgaacttgtgaattgt
attataatcagttctctgataacaacacaaaggaagttgaaagccatgtctctgttgggt
agtcggaaccaactggctagagctgttctgaatccaaaccctatggacttctgtacaaaa
gatttactaactacaacatctgagagaattattgcttacttaagagatttcaatgaagac
caaaagaaagcaatagaaactgcatatgctatggtgaaacactcaccatcagttgccaaa
atctgcttgattcatggaccacctggaacaggaaaatcaaaaactattgttggcctcctc
tattgtctactgacagagaaccagaggaaggggcgttcagacgaaaactccaatgccaaa
atcaaacaaaaccgtgtcctcgtgtgtgcaccttccaatgcagctgttgatgaacttatg
aaaaaaattatccttgaattcaaagaaaaatgtaaagacaagaagaatcctttaggaaac
tgtggagatataaatttagtacgactgggtccagaaaagtctatcaataatgaggttcta
aagttcagtttggacagccaagtaaaccacagaatgaaaaaagatttaccttctcatgtt
caggcgatgcataaaagaaaggaatttctagataatcagttggatgagctttcccggcag
cgagctctatgccgaggtggacgggaaatacagaggcaagaattagatgaaaacatttcc
aaagtttctaaggaaaggcaggaacttgcttctaaaattaaagaggttcaaggacgccca
cagaaaacacagaatatcatcatcttagagtcccatgtcatctgctgcacattgagcaca
agtggtggcttactacttgaatctgctttccgggggcaagggggtgtccccttcagctgt
gtcattgttgatgaggctggacagtcttgtgaaattgagactcttacgccactcatccat
cgttgcaataagctcatcctagtaggagatcccaagcagctccctcccacagtcatttct
atgaaagcacaggagtatggctacgaccagtcaatgatggctcgcttctgcagactgctg
gaagagaatgtagaacacaacatgatcagcaggctgcctattctgcagctcactgtgcag
tacaggatgcatccagacatatgcctcttcccttctaattatatttacaacagaaactta
aaaacaaatagacagacagaaaccattcgatgttcatcagactggccatttcaaccatac
cttgtgtttgatgttggagatggttcagaaagacgggataatgactcatacataaatgtt
caagaaataaaactggtgatggaaatagttaagcttattaaagacaaaagaaaggatgct
agttttcgaaacgttggcataataactcattacaaggcccagaagacgatgattcagaag
gatttggacaaagagttcgatagaaaaggaccagcagaagtagatactgtggatgcgttc
cagggtcggcagaaggattgtgttattgttacatgtgtcagagcaaatagcgtgcaaggt
tcaattggattcctggcaagtttgcagagattgaatgtcaccatcacacgagccaagtac
agcctcttcatcctcggacatttgaggaccctgatggaaaaccagcattggaatcagctc
attcaggatgctcagaagcgtggtgccattattaagacctgtgacaaaaactatagacat
gatgcaatgaagattctgaaactcaagcctgtgctacagagaagtctcactcaccctcct
accacagccccagaggtatccagaccccagggtggcttgcccagcagcaagctagacagt
ggatttgccaaaacatcttttgctgcttctctgtaccacacaccctctgactccaaggaa
actactcttactgttacttcaaaggaacctgaaagacctcctgttcatgaccaacttcgg
gacccacgactgctgaagaggatgggcattgaggtcaaaggaggaatattcctatgggat
ccacaacccttgagcccccagcatcctggagcaacacctcctgcaggagagccgagcttc
cctgtcgttcaccaggacctgggccatgtacagcagcctgctgctgtagtggctgctctg
agcagccacaaacctcccgtgcagggcgaacctccagctgccagtcctgaggcttccacg
tgtcagagcaaatgtgatgacccagaagaggagctctgtcaccggagagaggccagggct
ttcagtgaaggcgagcaggagaagtgtggttccgagacccctcacaccaggaggaactct
aggtgggacaagaggagactggagcaggaggacagcagttccaagaaaagaaagctttta
tag
DBGET
integrated database retrieval system
