Colobus angolensis palliatus (Angola colobus): 105504545
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Entry
105504545 CDS
T08744
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
cang
Colobus angolensis palliatus (Angola colobus)
Pathway
cang03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cang00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105504545 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cang03019
]
105504545 (EDC4)
Messenger RNA biogenesis [BR:
cang03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105504545 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
105504545 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EDC4L
Beta-prop_TEP1_2nd
DUF445
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_HPS5
WDR55
EIF3I
Motif
Other DBs
NCBI-GeneID:
105504545
NCBI-ProteinID:
XP_011787412
Ensembl:
ENSCANG00000041624
LinkDB
All DBs
Position
Unknown
AA seq
1401 aa
AA seq
DB search
MASCASIDIEDATQHLRDILKLDRPAGGPSAESPRPSSAYNGDLNGLLVPDPLCSGDGTS
TNKTGLRTMPPINLQEKQVICLSGDDSSTCIGILAKEVEIVASSDSSISSKARGSNKVKI
QPVAKYDWEQKYYYGNLIAVSNSFLAYAIRAANNGSAMVRVISVSTSERTLLKGFTGSVA
DLAFAHLNSPQLACLDEAGNLFVWRLALVNGKIQEEILVHIRQPEGTPLNHFRRIIWCPF
IPEESEDCCEESSPTVALLHEDRAEVWDLDMLRSSHSTWPVDVSQIKQGFIVVKGHSTCL
SEGALSPDGTVLATASHDGYVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQ
DPDVPFWRFLITGADQNRELKMWCTVSWTCLQTIRFSPDIFSSVSVPPSLKVCLDLSAEY
LILSDVQRKVLYVMELLQNQEEGHACFSSISEFLLTHPVLSFGIQVVSRCRLRHTEVLPA
EEENDSLGADGTHGAGAMESAAGVLIKLFCVHTKALQDVQIRFQPQLNPDVVAPLPTHTA
HEDFTFGESRPELGSEGLGSAAHGSQPDLRRIVELPAPANFLSLSSETKPKLMTPDAFMT
PSASLQQITASPSSSSSSGSSSSSSSSSSLTAVSAMSSTSAVDPSLTRPPEELTLSTKLQ
LDGSLTMSSSGSLQASPRSLLPGLLPAPADKLTPKGPGQVPTAASALSLELQEVEPLGLP
QASPSRTRSPDVISSASTALSQDIPEIASEALSRGFGSSAPEGLEPDSMASAASALHLLS
PRPRPGPELSPQLGLDGGPGDGDRHSTPSLLEAALTQESSTPDSQVWPTAPDITRETCST
LAESPRNGLQEKHKSLAFHRPPYHLLQQRDSQDASAEQSDHDDEVASLASASGGFGTKVP
APRLPAKDWKTKGSPRTSPKLKRKSKKDDGDAAMGSRLTEHQVAEPPEDWPALIWQQQRE
LAELRHSQEELLQRLCTQLEGLQSTVTGHVERALETRHEQEQRRLERALAEGQQRGGQLQ
EQLTQQLSQALSSAVAGRLERSIRDEIKKTVPPCVSRSLEPMAGQLSNSVATKLTAVEGS
IKENISKLLKSKNLTDAIARAAADTLQGPMQAAYREAFQSVVLPAFEKSCQAMFQQINDS
FRLGTQEYLQQLESHMKSRKAREQEAREPVLAQLRGLVSTLQSATEQMAATVATSVRAEV
QHQLHVAVGSLQESILAQVQRIVKGEVSVALKEQQAAVTSSIMQAMRSAAGTPVPSAHLD
CQAQQAHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDPAQVFGQPPCPLSQPVLLS
LIQQLASDLGTRTDLKLSYLEEAVMHLDHSDPITRDHMGSVMAQVRQKLFQFLQAEPHNS
LGKAARRLSLMLHGLVTPSLP
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctgcgcgagcatcgacatcgaggacgccacgcagcacctgcgggacatcctc
aagctggaccgacccgcgggcggccccagtgcagagagcccacggccatccagtgcctac
aatggggacctcaatgggcttctggtcccagacccgctctgctcaggtgatggtacctca
acaaacaagactggtcttcggaccatgccacccattaaccttcaagagaagcaggtcatc
tgtctctcaggagatgatagctccacctgcattgggattttggccaaggaggtagagatt
gtggccagcagtgactctagcatttcaagcaaggcccggggaagcaacaaggtgaaaatt
cagcctgtcgccaagtatgactgggagcagaagtactactatggcaacctgattgctgtg
tctaactccttcttggcctatgccattcgagctgccaacaatggctccgccatggtgcgg
gtgatcagtgtcagcacttcggagcggaccttgctcaagggcttcacaggcagtgtggct
gatctggcttttgcacacctcaactctccacagctggcctgcctggatgaggcaggcaac
ctgttcgtgtggcgcttggctctggttaatggcaaaattcaagaagagatcttggtccac
atccggcagccagagggcacgccactgaaccactttcgcaggatcatatggtgccccttc
atccctgaggagagcgaggactgctgtgaggagagcagcccgacggtggccctgctgcat
gaagaccgggctgaggtgtgggacctggacatgctccgctccagccacagcacctggcct
gtggatgtcagccagatcaagcagggcttcattgtggtaaaaggtcatagcacgtgcctc
agtgaaggagctctatcccctgatgggactgtgctggctactgcgagccatgatggctat
gtcaagttctggcagatctacattgaggggcaagatgagccaagatgtctgcacgagtgg
aagcctcatgatgggcggcccctctcctgcctcctgttctgtgacaaccataaaaaacaa
gaccctgatgtccctttctggaggttccttattactggtgctgaccagaaccgagagcta
aagatgtggtgtacggtgtcctggacctgcctgcagactattcgcttctccccagatatc
ttcagctcagtgagtgtgccccctagcctcaaggtttgcttggacctctcagcagaatac
ctgattctcagcgatgtgcaacggaaggtcctctatgtgatggagctgctgcagaaccag
gaggagggccatgcctgcttcagctccatctcagagttcctgctcacccaccctgtgctg
agcttcggtatccaggttgtgagtcgctgccggctgcggcacactgaggtgctgcctgcc
gaagaggaaaatgacagcctgggtgctgatggtacccacggagctggtgccatggagtct
gcggccggtgtgctcatcaagctcttttgtgtgcatactaaggcactgcaagatgtgcag
atccgcttccagccacagctgaaccctgatgtggtggccccactccccacccacactgcc
cacgaggacttcacatttggagagtctcggcctgaactgggctctgagggcctggggtca
gctgcacacggctcccaacctgacctccgacgaatcgtggagctgcctgcacccgccaac
ttcctcagtctgagcagtgagaccaagcccaagttgatgacacctgacgccttcatgaca
cctagcgcctccttgcagcagatcactgcctctcccagcagcagcagcagcagtggtagc
agcagcagcagcagcagcagcagctcccttacagctgtgtctgccatgagcagcacctca
gctgtggacccctccttgaccaggccacctgaggagctgactttgagcaccaagctgcag
ctggatggcagcctgacaatgagcagcagcggcagcctgcaggcaagcccacgcagcctc
ctgcccggcctgctcccagccccagccgacaaactgactcccaaggggccgggccaggtg
cctactgccgcctctgcactgtccctggagctgcaggaagtggagcccctggggctaccc
caagcctcccctagccgcacccgttcccctgatgtcatctcctcagcttccactgccctg
tcccaggacatccctgagattgcatctgaggccctatcccgtggttttggctcctctgca
ccagagggccttgagccagacagtatggcttcagccgcctcagcactgcacctactgtcc
ccacggccccggccagggcccgagctcagcccccagcttggccttgatggaggccctggg
gacggagatcggcatagtaccccctccctcctggaggcagccttgacccaggagtcctcg
actcctgacagtcaggtttggcccacagcacctgacattactcgtgagacctgcagcaca
ctggcagaaagccccaggaatggccttcaggaaaagcacaagagcctggccttccaccga
ccaccatatcacctgctgcagcaacgtgacagtcaggatgccagtgctgagcaaagtgac
catgatgatgaggtggccagccttgcctctgcttcaggaggctttggcaccaaagttcct
gctccacggctgcctgccaaggactggaagaccaagggatcccctcgaacctcacccaag
ctcaaaaggaaaagcaagaaggatgatggggatgcagccatgggatcccggctcacagag
caccaggtggcagagccccctgaggactggccagcgctaatttggcaacagcagagagag
ctggcagagctgcggcacagccaagaagagctgctgcagcgtctgtgtacccaactcgaa
ggcctgcagagcacagtcacaggccatgtagaacgtgcccttgagacccggcacgagcag
gagcagcggcggctggagcgagcactggctgaggggcagcagcggggagggcagctgcaa
gagcagctgacacagcagttgtcccaagcactgtcttcagctgtagctgggcggctagag
cgcagcatacgggatgagatcaagaagacagtccctccatgtgtctcaaggagtctggag
cctatggcaggccaactgagcaactcagtggctaccaagctcacagctgtggagggcagc
atcaaagagaacatctctaagctgctcaagtccaagaacttgactgatgccatcgcccga
gcagctgcagacacattacaggggccgatgcaggcggcctaccgggaagccttccagagt
gtggtgctgccggcctttgagaagagctgccaggccatgttccagcagatcaatgatagc
ttccgactggggacacaggaatacttgcagcagctagaaagccacatgaagagccggaag
gcacgggaacaggaggccagggagcctgtgctggcccagctgcggggcctggtcagcaca
ctgcagagtgccactgagcagatggcagccaccgtggccaccagtgttcgggctgaggtg
cagcaccagctgcatgtggctgtgggcagccttcaggagtccattttagcacaggtacag
cgcatcgtcaagggtgaggtgagtgtggcgctcaaggagcagcaggctgccgtcacctcc
agcatcatgcaggccatgcgctcagctgctggcacacctgtcccctctgcccatcttgac
tgccaggcccagcaagcccatatcctgcagctgctgcagcagggccacctcaatcaggcc
ttccagcaggcactgacagctgctgacctgaacctggtgctgtatgtgtgtgaaactgtg
gacccagcccaggtttttgggcagccaccctgcccactctctcagcctgtgctcctttcc
ctcatccagcagctggcatctgaccttggcactcgaactgacctcaagctcagctacctg
gaagaggccgtgatgcatctggaccacagtgaccccatcactcgggaccacatgggctcc
gttatggcccaggtgcgccaaaagctttttcagttcctgcaggctgagccacacaactca
cttggcaaagcggcccggcgtctcagcctcatgctgcatggtctcgtgacccccagcctc
ccttag
DBGET
integrated database retrieval system
