Colobus angolensis palliatus (Angola colobus): 105506346
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Entry
105506346 CDS
T08744
Symbol
COL20A1
Name
(RefSeq) collagen alpha-1(XX) chain isoform X1
KO
K24357
collagen type XX alpha
Organism
cang
Colobus angolensis palliatus (Angola colobus)
Pathway
cang04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
cang00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
105506346 (COL20A1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
VWA
Collagen
Pur_ac_phosph_N
VWA_2
Ig_DSCAM-DSCAML_C
Fn3_Dep-1_2nd
DUF4959
Motif
Other DBs
NCBI-GeneID:
105506346
NCBI-ProteinID:
XP_011789832
Ensembl:
ENSCANG00000041879
LinkDB
All DBs
Position
Unknown
AA seq
1277 aa
AA seq
DB search
MSSRAPAHLGLCLWLWLSTTLGREPGQASGHLRLTVLPEDRLQMKWRESEGSGLGYLVQV
QPMAGDSEQEVILTTKTPKATVGGLSPSKGYTLQIFELTGSGRFLLARREFVIEDLKSSS
LDRNNQRPLSSGALEPTPSLMGSPDPEQASEPRVAFAPSRDPPISASSQFRCLPPVPADV
VFLVDGSWSIGHSHFQQVKDFLASVIAPFEIGPDKVQVGLTQYSGDAQTEWNLNSFGTKE
QVLAAVHRLRYKGGNTFTGLALTHVLGQNLQPAAGLRPEAAKVVMLVTDGKSQDDVRTAA
RVLKDLGVNIFAVGVKNADEAELRLLASPPRDITVHNVLDFPQLATLAGLLSRLVCQRLQ
DGGPRRGPAAAPALDTLPAPTSLVLSQVTSSSIRLSWTPAPRLPLKYLIVWRASRGGTPR
EVVVEGPAASAELHNLTSRTEYLVSVFPIYEGGVGEGLRGLATTAPLSPPRALTLAAVTP
RTVHLTWQPSAGATHYLVRCSPASSKGEEEDREVQVRRPEVLLDGLEPGRDYEVSVQSLR
GPESSEARGIRARTPILAPPRHLGFSDVSHDAARVIWEGTPRPVRLVRVTYVSSEGGHSG
QTEAPGNATSATLGPLSSSTTYTVRVTCLYPGGGSSTLTGQVTTKKVPSPSQLSVTELPG
DTVQLAWVAAAPSGVLVYQIKWTPLGEGKAHEISVPGNLGTAVLPGLGRHTEYEVTILAY
YRDGARSDPVSLRYTPSTVNRSPPSNLALASETPDSLQVSWTPPRGRVLHYRLTYAPASG
SGPEKSVSVPGPRSHVTLPDLQAATKYRVLVSAVYAAGRSEAVSATGQTACPALRPDSSL
PGFDLMVAFGLVEKAYASIRGVAMEPSAFGGTPTFTLFKDAQLTRRVSDVHPAPLPPERT
IVFLVRLLPETPREAFALWQMTAEDFQPVLGVLLDAGRKSLTYFHRDSRAALQEATFDPQ
EVRKIFFGSFHKVHVAVGRSKVRLYVDCRKVAERPLGEVGSAPSAGFITLGRLAKARGPR
SSSAAFQLQTLQIVCSDTWADEDRCCELPASRDGETCPAFVSACSCSSETPGPPGPQGPP
GLPGRNGTPGEQGFPGPRGPPGVKGEKGDHGLPGLQGHPGHQGIPGRVGLQGPKGMRGLE
GTAGLPGPPGPRGFHGMAGARGTSGERGPPGAVGPTGLPGPKGERGEKGEPQSLATLYQL
VSQASHVSKFDSFHENTRPPMPILEQKLEPGTEPLGSPGTRSQALLPGEWEHGSRRLQGR
GEPGAVGQTGSPGQQGG
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atgagctcccgagcccccgcacacctcggcctctgcctctggctgtggctgagcaccacc
ctgggaagagagccaggacaagcaagtggccacctgaggctgactgtgctgcctgaggac
cggctgcagatgaagtggagagagtcggaagggagcggcctcggctacctggtgcaggtt
cagcccatggcaggggactcggaacaggaggtgatactgaccaccaagacccctaaggcc
acagtggggggcctgagcccctccaagggctacaccttgcagatcttcgagctcactggc
tctgggcgcttcctgctggctcggagggagtttgtgattgaggatctgaagagtagctcc
ttggacaggaacaaccagagacctctcagctctggagccctggagcccaccccctccctc
atggggagcccagacccggagcaggcttccgagccccgagttgccttcgcgccaagccgg
gatccgcccatttccgccagctcccagttccgctgcctaccccctgtgcctgctgacgtg
gtcttcctggtggacgggtcctggagcatcggccacagtcacttccagcaggtcaaggac
ttcctggccagtgtcattgcaccctttgaaatcgggccggataaggtccaagtaggcctg
actcagtacagcggcgatgcccagactgagtggaacctgaactccttcggcaccaaggag
caggtgctggcagctgtgcaccgcctccgctacaagggggggaacacgttcacaggcctc
gccctgacccacgtgctggggcagaacctgcagccggcggccggcctccgtccagaggcg
gccaaggtggtgatgctggtgacggacggcaagtctcaggacgatgtgcgcactgctgcc
cgtgtcctcaaggacctgggcgtgaacatctttgctgtgggtgtgaagaacgccgatgag
gctgagctgaggctcctggcgtccccgccgcgggacatcaccgtccacaacgtgctggac
ttcccgcagcttgccacgctggccggcctgctcagccgcctcgtctgccagaggctgcag
gatgggggcccgcggcggggcccagcagcggctccagccttggacaccctccccgccccc
accagcctggtcctgagccaggtgacctcctccagcatccgcctgtcctggactccagcc
ccccggctccccctcaagtatctgattgtttggcgagcctccagaggtggcacccccagg
gaggtggtggtggaggggcctgccgcctccgcagagctgcacaacctgacctcccgcacg
gagtacctggtctccgtgttccccatctacgagggcggggttggcgaggggctgcggggc
ctggcgaccacagcacctctgtctccgccccgggcgctgaccctggccgcagtgacgccc
agaaccgtccacctcacctggcagccctcagccggggccacccactacctggtgcggtgc
tcacctgcttcctccaagggtgaggaggaggaccgagaggtgcaggtgaggcggcccgag
gtgctgctggatggcctggaaccaggcagggactatgaggtctcggtgcagagcctgcga
ggccctgagagcagcgaggcccggggcatccgtgccaggacccccatcctggcccccccg
agacacctgggcttctcagacgtgagccacgacgcggcgcgagtgatctgggagggcacc
ccaaggcctgtgcgcctggtcagggtcacctatgtctccagcgagggtggacactcgggg
cagacagaggctcctgggaacgccacctcggccacactggggcccctctcttcctccacc
acctacactgtccgcgtcacctgcctgtaccctgggggtggctcctctacgctgaccggc
caggtcaccaccaagaaagttcccagcccaagccaactgtccgtgacggagctgccaggg
gacacagtccagctggcgtgggtggccgcagccccatctggtgtgcttgtctaccagatc
aagtggacgcccctgggagaggggaaggctcatgagatctctgtcccagggaacctcggc
acggccgtcctgcctggcctagggaggcacacggagtacgaagtcaccatcctggcctac
tacagggacggggcccgcagtgaccctgtgtccctccgctataccccctccacagtgaac
aggagccccccctccaacctggccctggcctcggagacccccgacagcctgcaggtcagc
tggacacccccacgtggccgcgtgctccactaccggctcacctacgcacctgcctctggc
tcaggacctgagaaatccgtctccgtgccaggacccaggagccacgtgacactccccgac
ctgcaggcagccaccaagtacagggtcctggtctcagctgtctacgcagcaggcaggagc
gaggctgtgtctgccacaggccagacagcctgcccagccctccgccctgacagctccctc
ccagggtttgacctgatggtggccttcggcctggtggaaaaggcttatgcttccatccgg
ggcgtggccatggagccctctgccttcggtgggaccccaaccttcacgcttttcaaggac
gcccagctgacaagacgggtcagtgacgtccatccagccccactccctccagagcgcacc
atcgtcttccttgtgcgcctgcttcccgagacgccccgtgaggcctttgcgctgtggcag
atgacggccgaggacttccagcccgtcctcggggttctgctggacgccgggaggaagtcc
ctgacctacttccaccgcgactccagggctgccttgcaggaggccaccttcgacccgcag
gaagtgaggaagattttcttcgggagcttccacaaggtgcacgtggctgtgggccgctcc
aaggtcaggctctatgtggactgccggaaggtggctgagcggcccctcggggaggtgggc
agtgcaccctctgccggcttcatcacgctggggaggctggccaaggccaggggcccccgg
agcagctcggccgcgtttcagctccagacactgcagatcgtgtgcagtgacacctgggcc
gacgaggaccggtgctgtgagctccctgcctcgagggatggagagacctgcccggccttc
gtgtctgcctgctcctgttcctcagagacccctgggcccccagggccccagggaccccca
ggcctccctgggaggaacggcactccaggagagcagggcttcccagggcccaggggtcca
ccaggggtcaaaggagagaaaggagaccatgggctcccaggcttgcagggccaccccggc
caccagggcatccctgggagagttggcctccagggaccaaagggaatgagaggcctggag
ggaactgctggcctgcctggaccccctggccccagggggttccacggcatggcaggggcc
aggggcactagtggagagcgaggacccccaggtgctgtggggcccacagggctgccgggg
cccaaaggggaacgaggagagaagggcgagccacagtccctcgccaccctctaccagctt
gtgagccaggcctcacacgtgtcaaagtttgactccttccacgagaacaccaggccccca
atgcccatcttggagcagaagctggagccgggcactgagcccctggggtcccctggcacc
cgcagccaggccctgcttcctggagaatgggagcatggtagccgccgtctacagggcaga
ggggagcctggagctgttggtcagacaggcagccctgggcagcaggggggctag
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