Capsicum annuum (peppers): 107838751
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Entry
107838751 CDS
T04646
Name
(RefSeq) protein indeterminate-domain 6, chloroplastic
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cann03000
]
107838751
Transcription factors [BR:
cann03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
107838751
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-met
zf-C2H2_6
zf-C2H2_STOP2_C
DUF7128
Sina_ZnF
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
107838751
NCBI-ProteinID:
XP_016537423
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Position
8:950656..961881
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AA seq
620 aa
AA seq
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MSAGSSSAVFLAMREEEQMKQQQQQQQQRELLFLQQQQQHGVPPSSSTIQSQQVPTKKRR
NQPGTPNPDAEIIALSPKTLMATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKSTK
ECKRKVYLCPEPSCVHHEPSRALGDLTGIKKHYSRKHGEKKYKCEKCSKKYAVQSDWKAH
TKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESARNPPSLSTIGSHLYGNNMSLGG
GGSLAKFNSQMPDHQDMLHFGSSNNSNKTITSGGSHHLHHHNHQFDHNNNNNNLMGPSSA
FRPSTAFFQLPADQTSHQDYAGGNKHHTSSSSIQGLMQLPDLHNNANVVAPSSSSMFNLN
FFQNNNSNNNNNNNNNNDDVVVDNDNNNISGGLGGLLLPSPHQFSNNNSGEGSNNSSNIF
SPSTLLGHNMSSSFPSLYVSSSIPAPPMSATALLQKAAQMGSTTSCNNSSTSASLLKVFG
SAPGAGASVGLGGSSSSGTKSDLHPPPPVNFAGVYGHENPMNTGNHLHDLVVNAYGAQEQ
HQEYGGVIGGGYNNNNKMNGYNEQPPQKKQMINNNNFSMEIGMSEEANRLTRDFLGVGEI
VRSMNGGGSNNNPFGGGNFQ
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcagggtcatcatccgccgtgtttcttgcaatgagagaagaagaacagatgaaa
caacaacaacagcaacaacaacaacgcgaacttctttttctccaacaacaacaacagcat
ggcgtaccgccatcctcatcaacaattcaatctcaacaagtaccaacaaaaaaaagaaga
aatcagccaggaacaccaaatccagatgcagaaataatagcattatcaccaaagacccta
atggcaacaaataggtttgtatgtgaggtatgcaacaaaggttttcaaagggaacaaaac
ctccaactacacagaagaggacacaatttgccttggaaattaaagcagaaaagtacaaaa
gagtgtaaaagaaaagtttatttatgtccagagccaagttgtgtacatcatgaaccatca
agagcacttggtgatcttactgggattaagaaacattattcaagaaaacatggtgagaag
aagtataagtgtgagaagtgttcaaagaagtatgctgtacagtctgattggaaagctcat
actaagacttgcggtacgcgcgaatatcgatgtgattgtggcacccttttctccagacgt
gacagcttcatcactcatagagctttttgtgatgcattggcacaagaaagtgctagaaat
ccaccaagtttgagcaccattgggagtcatttgtatggcaacaacatgagcttaggtggc
ggcggcagcctcgcgaaattcaactcccaaatgccagatcatcaggacatgctgcatttc
gggagtagtaataacagtaacaagactatcacaagtggtgggtctcaccacctccaccat
cataatcatcagtttgaccacaacaacaacaacaacaatctcatgggcccatcatccgcc
tttcgcccttctaccgccttctttcagcttccagctgatcaaacaagtcatcaagattac
gcggggggtaataagcatcatacatcatcatcgtctatccagggcttaatgcaactaccc
gatctccacaacaacgcgaatgttgttgctcctagctcttcgagtatgttcaacctgaat
ttcttccagaacaacaacagcaacaacaataacaacaacaacaacaacaacgacgacgtc
gttgttgataatgacaacaacaatatttctggtggtcttggtggattattacttcctagt
cctcatcaatttagcaacaacaatagtggtgaaggttcaaacaattcatcaaacattttc
tcacctagtacccttctaggtcataacatgagttcatcatttccctctctttatgtctca
tcatcgatacccgcgccacctatgtccgccaccgccctcctccagaaggcggctcagatg
ggttctactactagttgcaacaatagtagtactagtgcttcattgctcaaagtctttggc
tccgcgcctggcgctggtgctagtgttggtcttggtggttcgtcatccagtggcacgaaa
tccgatcttcaccctccaccacctgtcaatttcgctggtgtttacggccacgaaaaccct
atgaacactgggaatcatcttcatgacctagttgtcaatgcttatggtgcacaagaacaa
caccaagaatatggtggagtgattggaggagggtacaacaacaacaacaagatgaatggt
tacaatgagcagccaccacagaagaagcaaatgattaataacaataatttttcaatggaa
attgggatgagtgaagaagctaataggttaacaagagattttcttggagttggtgaaatt
gtaagaagtatgaatggtggaggatccaataataatccttttggaggtggcaattttcag
tga
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