Capsicum annuum (peppers): 107838807
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Entry
107838807 CDS
T04646
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 3, chloroplastic isoform X1
Organism
cann
Capsicum annuum (peppers)
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
zf-CCHC
CMS1
AAA_30
YgbB
ERCC3_RAD25_C
zf-CCHC_4
Cas3-like_C_2
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
107838807
NCBI-ProteinID:
XP_016537495
UniProt:
A0A1U8E2F0
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Position
8:30219135..30258423
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AA seq
745 aa
AA seq
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MACSSSIIGVPSIYQTNPSRRPTTSPPLYLPFSNEKSHFNVRLRHGLFSSSPFVASAVVT
PNSSVLSEEAFKGIGVFGKDSLNVSKTEYESEVKDDESGSKNENELAISKLGLPYRLVQS
LEKRGITELFPIQRAVLVPALEGRDIIARAKTGTGKTLAFGIPVLKKLSGDEEMISTQRR
GRLPKVLVLAPTRELANQVEKEMKESAPYLNTVCIYGGVSYATQQNALSRGVDVVVGTPG
RLIDLINNNCLKLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPPQRQSMLFSATMPGWV
KKLARRYLNNPLTIDLVGDQEEKLAEGIKLYALSTTTTSKRTILGDLVTVYAKGGKTIVF
TQTKRDADEVSMALSNSISSEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIP
NVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTGSQRRTVRSLERDVGCKFEFVS
PPSVKEVLESSAEHVVATLNGVHPESVEYFTPTAQQLMEQQGVNALAAALALLGGFSKPP
SSRSLITHEQGWTTLQLTRDSVNSRGFLSARSVTGYLSDVYSPAADEVGKIHLIADERVQ
GAIFDLPEEIAADLLNQELPPGNTISKITKLPALQDDGPASDFYGKFSSRDTRGSRGGLR
DRRGRNSRGSSSGRFSDNDDDNWRNDFRQQGARTRRGGNDWLISGDRRSSRSLSGGSRDR
SFGGACFNCGRSGHRASECPNKRDY
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggcctgttcttcttccattataggagttccctccatataccaaaccaacccttcacga
agacccaccactagcccacctttatatcttcctttctccaatgaaaaatctcattttaat
gttcgtctcagacatggtctgttttcttccagtccttttgtggcttctgctgtggtaact
ccaaattcttcggtgcttagtgaagaagcgtttaagggaatcggggtttttgggaaggat
tctttgaatgttagcaaaaccgaatatgagtctgaggttaaagatgatgagtcaggatct
aagaatgagaatgaacttgctatttctaaacttggtttaccttacaggcttgttcagtct
cttgagaagcgtggaattactgaacttttcccaattcagagagctgttctagtgccggca
ctggagggtcgggatataattgctcgtgcaaagactgggacagggaagacacttgccttt
ggtattcccgtattgaaaaagcttagtggggatgaagaaatgataagtactcagagacgg
ggacgacttccgaaagttttggtacttgcacctactcgagagttagccaatcaagtagag
aaggaaatgaaagagtcagcaccatacttgaacactgtctgcatatatggaggtgtttct
tatgctacacagcaaaatgcactttcccgtggggttgatgttgttgttggaactccaggt
agacttattgacctgataaacaataactgcttgaaactgggggaggtggaatatttggtt
ctcgatgaggctgatcaaatgctcgcagttggatttgaggaagatgtggaagttatattg
gaaaaacttccaccacagaggcaaagcatgcttttctcagccaccatgcctggttgggta
aagaaactggctaggaggtatttgaacaatcctttgacaattgacttggttggtgatcaa
gaggaaaaactggctgaggggatcaagctttatgctctatcaactacaacaacatcaaaa
cgaaccatacttggtgatcttgttacggtttatgcaaagggtggaaagacaattgttttc
acacagacaaaacgagatgctgatgaggtctcaatggcattatctaatagcatttcttct
gaggcactgcatggcgacatttctcaacatcagagagaaagaactctaaatggatttagg
caaggaaaattcactgtgctagttgcgactgatgttgcatctcgtggtcttgatataccg
aatgttgacctagtaatccattatgaactacccaacgatccagagacttttgttcatcgt
tctggtcgaacgggccgtgctggaaaagaaggcactgctattctgatgtacacaggtagt
caaaggcgaactgtcagatctctcgagcgtgatgtggggtgcaagtttgagttcgttagt
cctccgtctgtcaaagaggttttggagtcatcagctgagcatgtggtggctacacttaat
ggagttcatcccgaatctgttgagtacttcactccaactgcacaacagttgatggagcaa
caaggagtaaatgcgcttgctgctgcacttgcgcttttgggtggattttccaaaccacca
tcttctcgatctctaataactcatgaacaggggtggactacattgcagctgacacgtgat
tctgtaaattcccgaggattcctatcggcaagatctgttactggttacctctctgatgtg
tattcaccagctgccgatgaagttggcaaaattcacctaattgcagatgaaagggttcag
ggggccatatttgatcttccagaagagattgcagcagatctactaaatcaggagttacca
cctggaaatactatttccaagattaccaagttacctgctttacaagatgatggaccagct
agtgatttctatgggaagttttctagcagggatactagggggtcacgaggaggattaaga
gatcgtagaggcagaaactcccggggttcttctagtggtcgtttctcagataatgatgat
gataattggaggaatgactttaggcagcaaggtgcccgaacaagaaggggaggaaatgat
tggctcatcagtggtgataggcgctctagccggtctctatctggaggaagcagagacaga
agctttggtggtgcatgtttcaattgtgggcgcagtggtcaccgagcatctgaatgcccc
aacaaaagggactactag
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