Capsicum annuum (peppers): 107839204
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Entry
107839204 CDS
T04646
Name
(RefSeq) ATP-dependent helicase BRM isoform X2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107839204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cann03021
]
107839204
03036 Chromosome and associated proteins [BR:
cann03036
]
107839204
Transcription machinery [BR:
cann03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107839204
Chromosome and associated proteins [BR:
cann03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
107839204
Chromatin remodeling factors
BAF complex
107839204
PBAF complex
107839204
GBAF(ncBAF) complex
107839204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
QLQ
Bromodomain
AAA_14
Ribosomal_S13_N
Motif
Other DBs
NCBI-GeneID:
107839204
NCBI-ProteinID:
XP_016538085
LinkDB
All DBs
Position
8:145587188..145600877
Genome browser
AA seq
2242 aa
AA seq
DB search
MQSGGGGQQGGVAGAGGGHGRNTAASASASPSSSSSAASHMGLDQQQQQQLHQQQQQQRQ
SLQQQFLRRTEGNEAILAFQTGSAHGILGGGNFVGPSGSVQLPQQSRRYIEQHGSPTIRE
DGQNRSQAFEQQMLNPVQQAYLQYAYQAAQQKSALGLQQQQMKMGIFCPSAKDQDPRIAN
LKMQELVAMQASNQAQASSSKLSSEQHFSRGEKQSDQGQQLMTDQRQDTKLLSQPALLGQ
TVATKPMQAPPPSQQSMANMTSNSLAMAAQMQAMQALALERNVDLSLPANANIMAQLIPL
MQSRMITQQKVPENNVPVQSSSGHMPKQQVSSPQIANDSSPHAHSSSDLSGSSSAKTRQA
VTTGPLGMSHSVASVNNPNSVPQQQFSAHGRENNLPPRQPIMGSSGLPPMHYPQSSVNPN
QGVDNTVLPKPASNAQETLQTQYARQLSRPSPHSAASSPDANLGNSLTSQGGNVRQVQQQ
HLGFSKQQLHVLKAQILAFRRIKKGDGTLPRELLQAITPPPLDVQMQQTLPPGGTVNQEK
PSGKGSEDNRRRLESSEKGPQLVVPSDGLNGSKEEVRRDESTAAATTPVPGSSTETKETA
SVVPRGKEEQPITGHASKVDQDADRTIQNTPSRGDIAPDRGKAVASQVTGSDTTQAKKPM
QSSATQQKDTGPARKYHGPLFDFSFFTRKHDAFGPSMMMNNNNNLTLAYELKDLLVEEGS
EFHKRKREESIKKIGDILAINLERKRIRPDLVLRLQIEEKKLQLADIQARMRDEIDQQQQ
EIMAMPDRHYRKFVRLCERQRQDLSRQVQASQKAIREKQLKTIFQWRKKLLEAHWAIRDA
RTARNRGVAKYHERMLREFSKKKDDNRNERMEALKNNDVERYREMLLEQQTNVPGDGAER
YAVLSSFLSQTEEYLHKLGGKITAAKKQQEVEEAANAAAVAARAQGLSEEEVRAAAACAR
EEVMIRNRFSEMNAPRDGSSVNKYYHLAHAVNEMVIRQPSMLRAGTLRDYQLVGLQWMLS
LYNNKLNGILADEMGLGKTVQVMALIAYLMEFKQNYGPHLIIVPNAVLVNWKSEFLNWLP
SASCIFYVGSKDQRSKLFSQEVCAMKFNVLVTTYEFIMYDRAKLSKVDWKYIIIDEAQRM
KDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSKPF
QKEGPTNNADDDWLETEKKVIVIHRLHQILEPFMLRRRVEDVEGSLPPKVSVVLRCRMSG
FQSAVYDWIKSTGTLRVDLEDEQRRTEKNPNYQPKTYKVLNNRCMELRKTCNHPLLNYPY
LNVTKDFLVKSCGKLWVLDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLIYRRID
GTTSLEDRESAIVDFNSPDTDCFIFLLSIRAAGRGLNLQTADTVIIYDPDPNPKNEEQAV
ARAHRIGQKREVKVIYMEAVVDKIASHQKEDEYRVGVVDSDDDLAGKDRYIGSIESLIRN
NIQQYKIDMADEVINAGRFDQMTTHEERRLTLETLLHDEERYQETLHDVPSLQEVNRMIA
RSEEEVEQFDQMDEEFDWEEEMTRYDQVPKWLRATSKEVNTAIANLAKKPSKNVLFSSGV
GVDSSGLAPESEKKRGRPKGKKVPIYTELDDDNGEFSEASSGERNGYSANEEGDIGEFED
DEFNGAIDVTPANKDQSEEDGPSFVGRYEYHQGPQGAIKTRVPEQVGSSGSSSDNQRSKQ
IVSSSVSSQQKFGSLSALDARPSSRAKKMADELEEGEIAVSGDSHVDLQQSGSWIQDRDE
GEEEQVLQPKIKRKRSLRVRPRHAAERPEETLVEKPAVQRGDSSSQMAFQGDRRYDLQMR
NDRGHKTHAEPSGPKNSQSDASFKSKRSIPSRKSSSSSVKVHGSGKPGKVSRLSPDDAFE
PTRDSWDNKLMNASGSFSGGTKMSEVIQRKCKTVIIKLQKKIEKGGQQIIPLLHGLWKRI
DSTGCMGGSEDSLFGLQTVDLRVDESEYSGVLEFVSDVQLMLKRAVQYFGFSHEVRSEAR
KVHDLFFDILKLEFPETDFREARNSISFSGPAASTTPGASSRLMSVGQNKRHKLMNEMEH
DSSPLLKSQTRGVHHAGEDSKAKSHVAHRETRFGGSSSREINQQDDSRPFTHPGELVICK
KKRKDREKLVLKSGSSSGGPVSPPVVSRSIRSPGSLPTAKEGGRLNQQTPHQLNGSGSSS
VGWANPVKRLRSDSARRRQSHL
NT seq
6729 nt
NT seq
+upstream
nt +downstream
nt
atgcaatctgggggtggaggtcagcaaggtggtgtcgccggcgccggtggtggacatggg
cggaacacggcggcatcagcctcagcttctccttcttcatcatcttctgctgcctctcat
atggggttggatcagcagcagcaacagcagctgcatcaacaacagcaacaacaacgccag
tcattacaacaacagttccttagaaggactgaaggaaacgaagctattctggccttccag
actggcagtgcccatggaattttaggtgggggtaattttgttggaccttctggatctgtg
cagctacctcagcagtcgaggaggtatattgaacagcatggttctcccaccattcgagag
gatggacagaacaggagccaggcctttgagcaacagatgttgaatcctgtccaacaggcg
tacctgcagtatgcttaccaggcagcgcaacagaagtcagctcttggattgcaacagcag
caaatgaaaatgggaatattttgcccttctgcaaaggatcaagatcctagaattgctaat
ctgaaaatgcaggaacttgttgccatgcaggcatcaaaccaggcccaggcatcatcatca
aagttatcctcagagcaacatttctctcgtggtgagaaacaatctgaccaggggcagcag
ttgatgaccgatcagagacaagacacaaagcttctttcccagccggcattgcttggccaa
acggtagctacgaagcccatgcaggcgccgccaccatctcagcaaagcatggcgaacatg
acgagtaactctcttgctatggctgcacagatgcaagcaatgcaggctctggcacttgaa
cgtaatgttgatctgtcactacctgcgaatgctaatattatggcacaactaattccactc
atgcagtccagaatgattacccagcagaaagtgcctgaaaacaatgtgccggttcaatct
tcatcaggtcatatgccaaagcagcaagtttcatctcctcaaattgcaaatgatagttcg
ccccatgctcattcttcaagtgatttgtcggggtcaagttctgctaaaactaggcaggct
gttacaactggtcctcttggcatgtctcatagcgtagcttcagttaataacccaaatagt
gttccccaacagcagttttctgctcatggcagagagaacaatttacctcctagacaacca
attatgggtagcagtggattacctccgatgcattacccacagtcatctgtaaacccgaat
cagggtgtggataacaccgtgctgcctaagcctgcctcaaatgcccaagaaaccttgcag
acgcagtatgccaggcagttgagtcgaccttcaccacattctgcagcttcttctccagat
gcaaacttggggaattccctaacatctcagggtggaaatgtccgtcaggtgcaacaacag
catctggggttcagtaagcagcaattgcatgttcttaaagcccaaatacttgcatttaga
cgtataaagaaaggagatgggacattaccacgtgaattactccaagctattactccgcca
cctctggacgtgcaaatgcagcaaacattgcctcctggtggtacagtaaatcaggagaaa
ccatcaggaaaaggttcagaagataacagaagacgactggaatcgagtgagaagggtcct
cagcttgtagtaccatctgatggactgaatggttcaaaggaggaggtcagaagagatgag
agtacagctgctgcaaccacacctgtgcctggtagctcaactgagacaaaggagactgca
tcggtggttcctcgcggaaaagaggagcagccaatcacgggacatgctagtaaagttgac
caggatgctgaccgtactattcagaatactcctagcagaggtgatattgcaccagacagg
ggtaaagctgttgcatcgcaagttactggttctgatactactcaggcaaaaaaacctatg
cagtctagtgctactcaacaaaaagatacaggtccagctaggaagtatcatggaccatta
tttgatttttctttcttcactcgaaagcatgatgcttttggaccatccatgatgatgaac
aacaataataatttaacattggcttatgaactcaaggatcttctggtggaggaaggctca
gaatttcacaagagaaaaagggaggaaagcataaagaagattggtgatatactagctata
aatttagagaggaaaaggattagaccagatcttgttcttagattgcaaatagaagaaaag
aaactccaacttgctgatatacaggcacgcatgagggatgagattgaccaacagcagcag
gaaataatggcaatgcctgataggcattaccgaaaatttgtaaggctatgcgagcgtcag
cgtcaggacctatctaggcaagtgcaggcctcccagaaagctatcagagaaaaacaatta
aaaactatttttcaatggcgaaagaagcttcttgaggctcattgggcaatacgtgatgct
cgaactgcacgcaacaggggagtagctaagtatcatgagagaatgttgagagagttctcg
aagaaaaaggatgataatcggaatgaaagaatggaggcattgaagaataatgatgttgag
agatacagggagatgttgctagagcagcagaccaacgttcctggtgatggtgcagagaga
tatgctgttctttcatcatttttgagtcagacagaagagtatcttcataaattgggaggt
aaaattacagcagcaaaaaaacaacaggaggttgaggaggctgcaaatgccgctgcagtt
gctgcacgtgcacagggtctctctgaggaagaagtaagagctgcagcagcctgtgctcgg
gaggaagtcatgataaggaatcgtttctctgaaatgaatgcacccagagatggttcatca
gttaacaagtattaccatcttgcccatgctgtgaatgaaatggttataaggcaaccttcc
atgttaagagctggaactttgcgagactatcagcttgttgggttgcagtggatgctttct
ttgtataataataagctaaatggtatattggctgatgagatgggtctggggaagactgtg
caggttatggcattaattgcttacttgatggaattcaaacaaaactatggaccacatctt
ataattgtgcccaatgcagttctagttaattggaagagtgagtttctcaattggcttcca
tctgcgtcatgcattttctatgttggttcgaaggatcagagatctaagttgttttcacag
gaagtttgtgcaatgaaatttaatgttcttgtcactacgtatgagttcatcatgtacgat
cgtgctaaactttcaaaagtcgattggaagtatataataattgatgaggcacaacgtatg
aaggacagggaatcagttctagctcgtgatcttgacagatatcgatgccaaaggcgcttg
cttctcacggggacaccattgcagaatgatctgaaggaactatggtcacttctaaatcta
ctacttccagaagtttttgataatcgcaaagcatttcatgattggttctctaagcccttt
caaaaagaaggtccgacaaacaacgctgacgatgactggcttgagactgagaagaaggtc
atcgttatccatcgacttcaccaaattctcgagcctttcatgctcaggcgtcgtgttgaa
gatgttgaaggttcacttccacccaaggtctcagttgtcttaagatgcagaatgtcaggt
tttcagagtgctgtttatgattggatcaaatctactggtacacttagagttgaccttgaa
gatgagcagcgaaggactgaaaaaaatccaaattaccagcctaaaacatataaagtttta
aataatagatgcatggagcttcggaaaacttgcaaccatcctttgcttaattatccatat
ctcaatgttacaaaggacttccttgttaaatcatgtgggaaattgtgggttcttgatcgg
atattaattaaacttcaaagaacagggcacagggtgctgcttttcagtaccatgacaaag
ctgcttgatatcttggaggagtatttgcagtggcgacgactcatctatagaagaattgac
gggacgacaagcttagaggaccgtgaatcagctattgtggattttaatagtccagatact
gattgcttcatcttcttgctaagcattcgtgctgctgggcgtggattaaatttgcagact
gctgacactgtcatcatctatgatcctgatccaaaccccaaaaatgaagaacaggcagtt
gccagagcccatcgtatagggcagaagagagaagttaaagtcatttacatggaggcagtt
gtagacaaaattgcaagtcaccagaaagaggatgaatatcgtgtaggcgtagttgattct
gatgatgacctcgcaggcaaggaccgctatattggatctattgagagtctcattcggaat
aatattcaacagtataagattgacatggctgatgaagttataaatgctgggcgttttgat
caaatgactacacatgaagagcgacgtctgactttagagacattattacatgacgaggag
agatatcaggagacacttcatgatgttccctctctgcaggaggtaaatcgcatgattgct
aggagtgaagaagaggtagaacaatttgatcaaatggatgaagaatttgattgggaagag
gagatgactagatatgaccaggttccgaagtggctacgtgctaccagtaaggaagttaat
acggccattgccaatttagcaaaaaagccctcaaagaatgtcttattcagtagtggtgtt
ggcgtggactccagtggattagctcctgaatctgagaagaaaagggggcggcctaaaggc
aagaaggttcctatttacacagaattggatgacgacaacggagagttctctgaagcaagt
tctggggagaggaatggatattcagccaatgaagaaggtgatattggggaattcgaagat
gatgaatttaatggtgcaattgacgtcacaccagctaacaaagaccagtcagaagaagat
ggtcccagttttgttggtagatatgaataccaccaaggtccacaaggtgctataaagact
cgtgtacctgaacaagtgggttcatcaggatcatcatcggataaccaaaggtcgaaacaa
atagtatcatcgtctgtgtcttctcagcagaagttcggatccctttctgcgttggatgca
aggcccagttctcgggccaaaaagatggcagatgaattagaggaaggagaaatcgcagtc
tctggagattcacatgtggatctccagcaatctggtagctggatccaagatcgtgatgaa
ggtgaagaagaacaggtgttgcagcccaaaataaaaaggaaacgcagcttgagggttcga
ccaaggcatgctgcagaaaggccagaagagacactcgttgaaaagccagctgtgcagcgt
ggagattcttcttctcagatggcatttcaaggggatcgtagatatgatcttcaaatgaga
aatgatcgtggacacaaaacgcatgcagagcctagtggtccaaaaaatagtcaaagcgat
gcatcctttaagagtaagcgaagcataccgtctaggaaatcatcttctagttcagtgaag
gtgcatggttccggaaaacctggaaaagtcagtcgcttgtcccctgatgatgcttttgaa
cccacaagggatagttgggacaataagctcatgaatgccagtgggagttttagtggaggg
actaagatgtctgaggtcattcaaagaaagtgcaagactgtcattatcaagctccaaaag
aaaatagagaagggaggtcagcaaataattccactgctacatggtctgtggaaaagaatt
gatagtactggttgcatgggtgggtcagaggatagtctgtttggtttacagacagttgat
ctacgtgttgatgaatcagagtacagcggagtgctcgaatttgtgtctgatgtgcagctg
atgttaaaacgtgcagtgcaatactttgggttctctcatgaggtcagatctgaagcaagg
aaagtacatgatcttttctttgacatcttgaagctagaatttccagagactgattttcga
gaagcaaggaattccatctccttttctggaccagcagcttctactactcctggtgcgtct
tcacggctgatgtctgtaggtcaaaacaagagacacaaactgatgaatgaaatggaacat
gactctagcccactgctgaagtcacagacacgtggagtacaccatgccggtgaagatagc
aaggctaagagtcatgtggctcatagagaaacaagatttggtggtagcagcagccgggag
attaaccaacaggatgattcacgcccattcactcatcctggggagctggttatttgcaaa
aagaaacgaaaagacagagagaagttggttttgaaatctgggagtagttctggtggtcct
gtctcaccacctgttgtcagccgcagtatcagaagtccaggctccctcccaactgcaaag
gagggggggcggttaaaccagcagacaccccatcagttgaatggcagtggtagcagttct
gttggctgggcaaatcctgtgaagagactgagatcagattctgcaagaaggcggcaaagt
catttataa
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integrated database retrieval system
