Capsicum annuum (peppers): 107839305
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Entry
107839305 CDS
T04646
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
107839305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cann03400
]
107839305
DNA repair and recombination proteins [BR:
cann03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
107839305
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
VHS
Motif
Other DBs
NCBI-GeneID:
107839305
NCBI-ProteinID:
XP_016538213
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All DBs
Position
8:complement(147425405..147429468)
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AA seq
670 aa
AA seq
DB search
MKLGKAMEAEEKKMVVEGLIDKATNSTRPEVEPRILKSIKSVVRSSDSELRLAAHTLMSL
MKRDHSQVRYLALLIIDELFMRSKLFRIIIVENLDQLLTLSVGFRRNLPLPPPASVASVL
RPKAIEFLEKWNSSFGIHYRQLRLGYDHLKNTLRLHFPNLQANAARIRQERRERETRTKE
ILLKKFETLKENLASIKDEIQSTVDEIGECLNILSTKDEEDILFPPLDDTEIVEFRNSEL
RQIRLDSLKEGEKIKEDSENEVVFDALRELFKVLVTKHMVTVQEWISVLIRVEPTDTRFR
DSTLKDFIDTHNHLKSVKKKCEESGCTLPKSRSLEEEDIWEEGNVEPENGKSFEKPDRGE
DFSLNLNFSGMRVEAPECSNLNIKGKGKLPVANGGSETDTSRGKLLAEAPVMNWGSFLDD
WGSNSRDVLANQRGLDLDGHWGRVDHDAVIPADKIAELKVHATVYKEDPVEIQPCRAPLR
NGGLCQRRDLKICPFHGPIIPRDDEGKPFDTVSSTEDQAAQLVEQQEPISPCPSVAENLH
ELDDKLVEKLAKQAVKNVRQRDREETKKREQDKQISKRAKLAKVREHNQDVLRDAALAST
SRSLYAGENLDRSSSSKSKKETLASMLKKKETTKDRLGQRLLNARARDATVRQLTVAEDA
NYREAFPNQW
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgggaaaggcgatggaggcagaagaaaagaaaatggtggtggagggtttaatt
gataaggcaaccaactccacccgaccggaagtggagccccgaattctgaaatccatcaaa
tcggtggtccgttcatctgattcggagctccgacttgctgcccatacgcttatgtctctt
atgaaacgtgaccactctcaggtgcgctatcttgctctgctcataatagatgaactcttc
atgcgctcaaaactttttagaattattattgtcgagaacttggatcagttactcacttta
agcgttgggttcagaaggaatctgccgcttccacctcctgcgtctgttgcttctgtatta
cgccccaaagcaattgagttcttagagaagtggaattcttcatttggcattcattatagg
cagctcaggttggggtatgaccatttgaagaacaccctccgtcttcacttcccaaatttg
caagcaaatgcagctaggattcggcaagaaaggagggaaagagagacgaggacaaaggag
atcctgctgaagaagtttgaaaccttgaaggagaaccttgcttctataaaagatgaaatt
cagtcgacagttgacgaaattggagagtgtttgaacattttaagcacaaaggatgaagaa
gatatattgtttcctcctttagatgatacagaaattgtggaattccgcaactctgaactc
cgacaaatccgtcttgattccttgaaggagggggaaaagattaaagaggacagtgagaat
gaagttgtgtttgatgctttaagggaactattcaaggttctagtaacaaagcatatggtt
acagtgcaagaatggatctctgttctcataagagtggaaccaacagacactaggttcagg
gactccacattaaaggattttattgatactcataatcatctcaaatcagtgaagaagaaa
tgtgaagaatctggttgtactctgcctaaatcaagaagtcttgaggaagaagacatatgg
gaagaaggtaatgtggaaccagaaaacggaaaatcatttgaaaagcctgaccgaggtgag
gatttttccttgaatctgaatttcagtggaatgagagttgaagctcctgaatgtagtaat
cttaacataaagggaaaggggaagttgccggtggccaatggtggcagtgaaactgacacc
tctagaggtaagcttttagcggaagctcccgttatgaattggggttctttcttggatgat
tggggatcaaacagcagggatgttttggcgaatcaaagaggtttagatcttgatggccat
tggggtagggtggaccatgatgcggtgattcctgctgataaaattgcagaattgaaagtc
catgccactgtttataaggaggatcctgttgaaatacaaccatgtcgggccccattaaga
aacggaggtctttgtcagaggagagatttgaaaatctgtccatttcacggacctattatt
cctcgagatgatgaaggcaaaccatttgatacagtctcatcaacagaagaccaggctgca
cagttggtggagcaacaagagcccatctctccatgcccttcagtagcagagaatttacat
gagttggatgataaacttgtggaaaaattagccaagcaggctgtaaaaaatgtccgacaa
agagatagagaggagacaaagaagagagagcaggacaaacagatttcgaagcgtgcaaag
cttgcaaaagttcgagaacataatcaagatgtcctacgtgatgctgcattggcatcgacc
tcaagatccttatatgctggagaaaatctggatagatcttcttcgtccaagagtaagaaa
gaaactctggcatctatgttaaaaaagaaagaaactaccaaagatagattgggtcaaagg
cttcttaacgcccgagctagagatgcaacagtacggcagttaacggtggctgaagatgct
aattaccgtgaagcctttccaaatcaatggtag
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