Capsicum annuum (peppers): 107839373
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Entry
107839373 CDS
T04646
Name
(RefSeq) protein argonaute 4A
KO
K11593
eukaryotic translation initiation factor 2C
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cann03019
]
107839373
03036 Chromosome and associated proteins [BR:
cann03036
]
107839373
Messenger RNA biogenesis [BR:
cann03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
107839373
Chromosome and associated proteins [BR:
cann03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
107839373
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
107839373
microRNA pathway
RISC loading complex
107839373
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
DUF7780
Motif
Other DBs
NCBI-GeneID:
107839373
NCBI-ProteinID:
XP_016538312
LinkDB
All DBs
Position
8:148810894..148819223
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AA seq
881 aa
AA seq
DB search
MSSTKGEATGSKPNRDLMARPGTGMKGQKIRLLTNHFNVGMTNADGHFFHYSVALSYEDG
TPVELKGIGRRILEQVHQTYAVELAGKDFAYDGEKSLFTIGALPGNKFEFDVVLEDSSSS
RTARGSPGGSPGDGDRKRSKKQPWSKAYKVVIKYAAKIPMQAIANALRGQDSEQYQEAVR
VLDIVLRQHAAKRGCLIVRQSFFHNEPRNFVNLGGGVLGCRGFHSSFRATQGGLSLNMDV
STTMIVQPGPVIDFLLANQNTKDPYQIDWAKAKRMLKNLRIKANPSNMEHKITGLTDMPC
KEQTFMLRQKNGDGGVHEVELTVYEYFTIHRRIPLQYSGDFPCINVGKPKRPTFIPLELC
TLVSLQRYTKALSNLQRASLVEQSRQKPQERMKTLTEALHASKYKADPLLGSAGISISSQ
FTQVEGRVLPTPKLRVGDHQDLFPNKGRWNFNQKLLVEPVKLERWAAVNFSARCDVRKLC
MDLQRCGKMKGIFINPPFEHIFEENPQYRRSPAPVRVEKMLETLKSTLPGSPQFLLCILP
EKKNSDLYGPWKKRNLADLGVVTQCIAPTKINDQYLTNVLLKINAKLGGMNSFLATELSP
TLPQISKVPTIIIGMDVSHGSPGRADVPSIAAVVSSRQWPYISRYRAAVRTQSPKMEMID
SLYKKVSDNEDEGLFRELLKDFYTSSKNVKPEHIIIFRDGVSESQFNQVINIELNQIIEA
CNHLDESWSPKFTVIVAQKNHHTKFFQTNSPENVPPGTVIDNAVCHPKTNDFYMCAHAGP
IGTTRPTHYHVLHDEIGFSADDMQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQMAQF
VKFDELSETSSSHGGVATAGSFQVPALPPLHRNVRSSMFFC
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctacaaaaggtgaagctacaggatcaaaaccaaaccgtgatcttatggctcga
ccaggaactggaatgaaaggccagaaaattcgcctacttaccaaccattttaatgtaggg
atgaccaatgctgatgggcacttcttccactatagtgttgctctaagttatgaagatgga
actcctgtggaattaaaaggcattggaaggagaattcttgagcaggtccatcaaacgtat
gcagtggagctagctggcaaagattttgcctatgacggggagaagagcttgtttactatt
ggtgcattgcctgggaacaagtttgagtttgatgttgtcctggaggactcctcttcatct
agaactgctcgaggcagccctggagggagcccgggtgatggtgataggaaaagatcaaag
aaacagccatggtcgaaggcatataaagtggtgattaagtatgctgccaaaatacctatg
caagctattgcaaatgcattgcggggacaagattctgaacagtatcaagaggcagtgaga
gtgcttgacatagttctgaggcagcatgctgccaaacggggctgccttattgtgcgtcaa
tcttttttccataatgagcctagaaactttgttaatcttggtggaggagttttaggatgc
cgaggtttccattcaagcttcagggccacacagggaggcctttcattgaacatggatgtg
tcgaccacaatgattgtgcagccaggcccggtgatagatttccttcttgcgaatcaaaac
acgaaagatccttaccagattgattgggccaaggcaaagaggatgctgaagaatctgagg
attaaggccaacccctcaaatatggaacacaaaatcaccggcctcactgatatgccttgc
aaagagcagactttcatgttgaggcagaaaaatggggatgggggagtgcacgaggttgag
ctgactgtttatgagtatttcactattcatcggcgtattcctttacagtattctggagat
tttccttgcatcaacgtggggaaacctaaacgtccaaccttcattcctcttgagctttgc
actctggtgtctctgcagcgctacaccaaggcgctgtccaatctacaaagggcttcccta
gtagaacaatcccgacaaaagccccaagaaaggatgaaaactttgaccgaggctctacat
gccagcaagtataaagctgacccacttcttgggtctgctggaatttcaatcagttctcag
tttactcaagttgaaggtcgtgtcttgccaactccaaagttgagggtaggagatcatcaa
gatttgtttcctaataagggaaggtggaattttaaccagaagctattggttgaaccggtt
aaacttgagcgttgggctgctgtgaacttttctgcccgttgtgatgtccgtaagctttgc
atggatctacaaaggtgtgggaaaatgaaaggaattttcatcaatccaccatttgaacat
atttttgaggagaatccgcagtataggcgcagccctgctcctgttagagttgagaagatg
ttagaaacgttgaaatcaacacttccaggctcacctcagttccttctatgcattctacca
gagaaaaagaactctgacctttatggcccctggaagaaaaggaatttggctgatcttgga
gttgttacacaatgcattgctccaacaaaaatcaatgatcagtaccttaccaatgtgctc
ttgaaaatcaatgcaaagctgggtggcatgaattcctttttggctacggagctttcccca
acactacctcagatttcaaaggtaccaactatcattattgggatggatgtctcccatggc
tcacctggacgagcagatgttccctccattgcagcggttgtcagttctagacaatggccc
tatatttcacgctatagagctgctgttcgtacacagtcaccaaagatggaaatgatagat
tctctgtacaagaaagtatctgataacgaagatgagggccttttcagggaactattgaag
gacttctacacaagttcaaagaatgtgaaacctgagcatatcatcattttcagagatgga
gttagtgagtcccagttcaaccaagtcataaacattgaactcaatcagattattgaggcc
tgcaatcatctggatgaaagttggtctccaaagttcactgttatcgttgcacaaaagaac
caccacacaaagtttttccagaccaactcaccagagaatgttcctcctgggactgtgatt
gacaatgcagtttgccatccaaagaccaatgacttctacatgtgtgctcatgctgggcct
attggaacaacaagacctacacactaccatgttctgcatgatgaaattggattctctgca
gatgacatgcaagaactggtccattcattgtcctatgtgtatcagagaagcaccacagcc
atctctgttgttgcacctatatgttatgctcacttggcagcagcacaaatggcacagttt
gtcaagtttgatgaactgtcagagacgtcctcaagccacggtggagttgcaacagctggt
agttttcaagtgcctgcattgcctccgcttcacaggaatgttcgcagttccatgtttttt
tgttaa
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