KEGG   Capsicum annuum (peppers): 107839494
Entry
107839494         CDS       T04646                                 
Name
(RefSeq) WD repeat-containing protein 48
  KO
K15361  WD repeat-containing protein 48
Organism
cann  Capsicum annuum (peppers)
Pathway
cann03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:cann00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    107839494
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cann03400]
    107839494
DNA repair and recombination proteins [BR:cann03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     107839494
SSDB
Motif
Pfam: WD40_Prp19 WD40 DUF3337 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_EML_2 Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_SCAP WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_SPT8 Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF4 Beta-prop_EIPR1 Beta-prop_RIG_2nd NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st ANAPC4_WD40 Beta-prop_WDR75_2nd RAWUL WD40_RFWD3 Beta-prop_DCAF12 Beta-prop_Vps41 Beta-prop_IP5PC_F Beta-prop_RIG_1st WDR90_beta-prop_4th VWA_3_C KNTC1_N
Other DBs
NCBI-GeneID: 107839494
NCBI-ProteinID: XP_016538487
LinkDB
Position
8:151116927..151132186
AA seq 762 aa
MHRVASAGNTSNSVRPRKEKRLTYVLNDADDTKHCAGVNSLAVLKSSATDGCEYLFTGSR
DGTLKRWALAEDVATCSATFESHVDWVNDAVLTGSNTLVSCSSDTTVKVWNGLSEGSCIK
TLRQHSDYVTSLASAEKNSNVIASAGLGGEVFIWDLEAALTPTSKSSDATEEDCSNGVNG
SGSSLPMTSIRPISSSNNISLQTQSQAYIPVTAKGHKESVYALAMNESGSLLVSGGTEKV
VRVWDPRTGSKTMKLKGHTDNIRALQLDSTGRFCISGSSDSMIRLWDLGQQRCVHSYAVH
TDSVWSLASTPTFSHVYSGGRDLSLYLTDLATRESVLLCTKEHPILQLALHDDGIWVATT
DSSVHRWAAEVRNPQKVFQRGGSFLAGNLSFSRARVSLEGSTPVPVYKEPCLSIPGTPGI
VQHEILNNRRHVLTKDTAGTVKLWEITRGTVIHNYGEVSFEKKKEELFEMVSIPAWFTVD
TRLGSLAVHLDTPQCFSAEMYSADLNIPGKPEDDKVNLARETLKGLLAHWLTKRRQRFGS
QVLVNGEAQPGKDVPTRNLTSSRIEMDGNADNDAAVYPPFEFSAASPPSIITEGSQSGPW
RKKITDLDGTEDEKDMPWWVVDCVMNNRLPPRENTKCSFYLHPCEGSAVQILTQGKLSAP
RILRIHKVINYVVEKMVLEKPLDSINSDGSTGMPGGQVTHPTIGGDGLFRTGLKPWQKLK
PSIEILCNNQVLSPDMSLATVRAYIWKKPEDLVLNYRVLTSR
NT seq 2289 nt   +upstreamnt  +downstreamnt
atgcaccgtgtagcaagtgcaggcaacacatccaattcagttaggcctaggaaggagaag
aggttgacttatgttttgaatgatgccgatgatactaagcattgtgcaggcgtaaattct
ttggctgtattgaagtcatcagccactgatggatgtgaatacctatttactgggagtaga
gatggcacgttaaagagatgggcattggctgaagatgttgccacctgctctgccacattt
gagtcacatgtcgattgggtaaatgatgcagttcttacaggtagtaacacattagtgtca
tgctcctcagacaccactgtcaaggtgtggaatggcttatctgagggatcttgtattaag
acactccggcagcactctgattacgtcaccagccttgcgtcagcagaaaaaaatagcaat
gttattgcatctgctggtcttggcggtgaggttttcatatgggatcttgaagctgcactt
actccgacatctaagtccagtgatgccaccgaagaagactgttcaaatggtgtcaatggt
tcaggaagttcattgcccatgacaagcatccgtcctatcagttcgagcaataacatttcc
ttgcagacccagtctcaagcatatattcctgtgactgctaaaggccataaggagtcagta
tatgcattggcaatgaatgagagcggatcccttcttgtttctggtggtactgagaaggtt
gtgcgcgtttgggacccaagaactggttccaagaccatgaagctaaaaggtcatacagat
aatattagggctctccagctagattccactggcaggttctgcatatctggatcttctgat
tccatgattagactatgggatctaggtcagcagcgatgtgtgcattcttatgctgtgcat
acggattctgtgtggtcacttgctagcactcctacatttagtcatgtttatagtggtgga
agagacctctctttatacttgacagatttggcaacaagggagagtgtattgctctgcacg
aaggaacaccccattttgcaattagcattgcatgatgacggcatttgggtggccacaact
gattcatctgtacatagatgggctgcggaagtgcgtaatccccagaaagtgttccagaga
gggggctcattcttggctggaaacttgtccttttccagggcaagggtttctctagaagga
tctacacctgtgcctgtttataaagaaccatgtcttagcattcctggaactccaggaata
gtgcagcatgagattttgaacaacagaagacatgtcctgactaaggacactgctggtaca
gtgaagttgtgggagatcactagaggcactgtgattcacaactatggagaggtatcattt
gagaagaagaaagaagaactttttgagatggtgagcatccctgcatggttcactgtggac
acgaggcttggaagcttggctgtacatctggatacgccacaatgcttttctgctgagatg
tactctgcggacctcaacattccagggaagcctgaagacgacaaggttaatttggcacga
gaaactcttaaagggctgttggctcattggttaaccaaaagaagacagagatttggatct
caagttctagtcaatggggaagcccaacctggaaaggatgtgcctacaaggaatctgacg
tcgtcaagaattgaaatggacggtaatgctgacaatgatgctgcagtatatcctcccttt
gaattttcagcggcatcccctccatcaattattaccgagggttctcaaagtggtccatgg
aggaaaaagattaccgacttagatggaacggaagatgagaaggacatgccatggtgggta
gtggattgtgtgatgaacaatcggttgccgcccagggaaaataccaaatgtagcttctac
ttgcatccatgtgagggttctgcagtccagattcttacccagggaaagctgagtgcgcct
cgcatattaagaattcacaaagtcatcaactatgttgtagaaaagatggttcttgagaag
ccactggatagcataaactcagatggatctactggaatgcctggtggacaggtgacacac
ccaactattggaggagatggtttatttcggactgggctgaagccttggcaaaagcttaag
ccatctatcgagatcttgtgcaataaccaggttttatcccctgatatgagcttagcgact
gtacgggcgtatatatggaagaaacctgaagaccttgttctcaactaccgggtgttgacg
agcaggtga

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