Capsicum annuum (peppers): 107839573
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Entry
107839573 CDS
T04646
Name
(RefSeq) DNA polymerase zeta catalytic subunit isoform X1
KO
K02350
DNA polymerase zeta [EC:
2.7.7.7
]
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
107839573
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cann03400
]
107839573
Enzymes [BR:
cann01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
107839573
DNA repair and recombination proteins [BR:
cann03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
B-family DNA polymerases
107839573
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
POL3_N
REV3_N
zf-C4pol
DNA_pol_B_exo1
divDNApol
PHF5
Motif
Other DBs
NCBI-GeneID:
107839573
NCBI-ProteinID:
XP_016538602
LinkDB
All DBs
Position
8:153636630..153650196
Genome browser
AA seq
1963 aa
AA seq
DB search
MEDSQNDLKFFSVRIVSIDYYMSPPLPAFDISYSTFQGGRVNEVPVIRVYGATPAGQKTC
LHLHGALPYFYVPCSELSLQSDEKGSECTNALARALEKVLKLKGSAGSKRQHVHGCSLVR
ARKFYGYHSSEELFLKIYFYHPQDVSRAANLLLGGAVLDKSLQPHESHIPFLLQFLVDYN
LYGMGHLHVSKMKFRNPIPDTFSPRKANYIDRRSSDMSTSMTAEFQVDLDGEACFDTPIW
ISSTIPDDWMWKYSSQADTSTDPDIPNIKRQSISELEGDAIVDAIVNQQLISYMSVSQTC
SQEKMVQSLIPIWEEEFARNGLYEVGLPPDPGKPLQDDVLKTLSHGIGYEEILMELSNDV
KVSSDMLQSITSSMNDGNIANVEHGGSLNSIREPSKCSKEGLFQDHVVEKREETDACPKQ
LLVDQMEATVSVVPSQDVKASDQDALRLLNWLASSQAAEDINSDDDLGQETILSPSMPAT
TIDTVLEKANVAYENESQQECEDILDSVRDCYFEELERKTSQSISNNRSCRSSSSMIIPQ
LDGSNDDPNPFPFVNDSSETYKKFGRSSQADSWNKATLATNNKHRNKRPGWCSLPIALGQ
NLNDSHPNPVHTPSSHICDERAGRRTSSHMNFNEQPNFLTRNLNKSANCEEKSSTIVECS
TRDLMRVKRSYQAEPSEYGNQVKKVQIGAEGREDSFLYSESNHDKKEKRLRDSLISRTAI
TDQPRECNERSSYLALQLQAEPGDIKADKSNCPSYCKLPLSSSSLLTNASKDGVLLSSEG
PHVEVVSRASAGFQRSASTSQGTKDIFQLPDVENQKSTIYMGSCGCCSRENVDSCMKCLS
QYPAGPSHSISTVTGVSGDVSELIGMTFSKKPPKAEFTDEPGRSVQSARGAPSYHVVKNK
TRTCVQDRDLDECPPFFEGNDLVGEKICSIKYGTDDYAHCQDSVLGVPVHYQNDGSYLYM
LTPVYSPPRSECVRQWLSVDCIDSSKMDVVSGPPMNPSTKVCSDDVAELQDSQSTFGDQP
LMDSASASEPNTNQLQAKENCQESTGVHDARMKQQDEEIILKYNPSLGGSQNLSQISGPD
RKSRLTPLSQTGFRDPASIGCGQQLTILSIEVQAESRGDLKPDPRFDAVRIVVLFFQEDD
DFRSDTHVLLHCNGESVQRDLDGVSECKVLTFSEERQVFFHFIKIIKSFDPDIFMGWDIQ
GGSLGFLAERAAYLGIGLLNKISRSPSEGNIASRDSEGGKLSDIFSDAVAADPMSHEDAA
IIDDEWGRTHASGVHVGGRIVLNIWRLMRGEVKLNLYTLEAVAEAVLRRKIPYIPNKVLT
NWFLSGPGRARYRCIEYFLERAKLNLQIMNQLDVVNRTSELARIFGIDFFSVLSRGSQYR
VESMFLRLAHAQNYVAISPGNQQVASQPAMECIPLVMEPKSGFYADPVVVLDFQSLYPSM
IIAYNLCFCTCLGKVTSTKANILGVSSYSPDKNVVHNLKDEILLTPNGVMYVPPRVRKGV
LPRLLEEILDTRIMVKTAMKKLAPGQQVLHRIFNARQLALKLIANVTYGYTAAGFSGRMP
CAELADSIVQCGRRTLECAISFVNTNHRWNAKVIYGDTDSMFVLLEGRSVEEAFRIGHEI
ASEVTAMNPNPVTLKMEKVYDSCFLLTKKRYVGYSYENIVQSKPVFDAKGIETVRRDTCG
AVSKIMERSLRVFFEYRDIQKVKSYLVRQWKKIISGRVSLQDFVFAKEVRLGTYSAQTSS
LPPAAIVATKAMRVDPRAEPRYAERVPYVVVHGEPGARLADVVVDPLDVLSIDSPYRLND
IYYIKKQIIPALQRVFGLVRADLNQWFSDMPRTEREVAGKRHLVAANAHRTRIDYYYLSK
HCIICGELIQASSYVCQNCSRNEAVVAAALTGRTSMLERNIQHLAAICRHCGGGDWFVES
GVKCTSLACSVFYERRKVQKELQSLSAVTTDTGFYPRCVVEWF
NT seq
5892 nt
NT seq
+upstream
nt +downstream
nt
atggaggattctcagaacgatttgaaattcttcagtgttcgaattgtttctatagactat
tacatgtcccctcctcttcccgccttcgacatttcttacagcactttccaaggtgggaga
gtaaatgaggtccctgtgataagagtgtatggtgctactcctgctggacagaagacctgc
ttgcaccttcatggagctcttccttatttctatgttccatgctcagagctctccctccaa
tcagatgagaaagggagcgaatgcacgaatgctctcgctcgtgctcttgagaaggtgctc
aagctaaaaggtagtgctggttcaaaacgtcaacatgtccatggctgcagccttgtacgc
gcaaggaagttttatggttatcattcttcagaggaactgtttttgaagatctatttctat
catccacaggacgtctcacgtgctgccaatcttctactaggaggtgcagtactggataag
tcattgcagccccacgaatcacatatacctttccttcttcaattcctggttgactataat
ttgtatgggatgggccatctacatgtatcaaaaatgaagttccgcaatccaattccagat
actttctccccaaggaaggctaactacattgacagaaggtcttctgatatgtccacttcc
atgactgcagagtttcaggttgatttagatggtgaggcttgttttgatacgccaatttgg
atatcttctacaattccggatgattggatgtggaaatactctagtcaggctgatacttca
acagacccagatatccctaacattaagcgacaaagtatctctgaacttgaaggagatgct
attgttgatgcaattgtgaatcagcagttgatatcctacatgtccgtttcacaaacctgt
tcccaagagaaaatggttcagtcgctaataccgatttgggaggaggagtttgcaaggaat
gggttgtatgaagtgggcttgcctcctgatcccggtaaaccacttcaagatgatgtcttg
aaaacactttcacatgggattggatatgaagagattctaatggaattaagcaatgatgtg
aaggtttcttctgatatgctgcagtcaataacctcatcaatgaatgatgggaacattgcc
aatgttgagcatggtggctctttaaatagtatacgtgaaccatccaaatgctcaaaagaa
ggattatttcaagatcatgttgtggagaaaagggaggaaactgatgcatgtcccaagcaa
ttgttagttgatcagatggaagcaactgtttccgtggtaccctcacaggatgtgaaggct
tctgatcaggacgccttaagacttctaaattggcttgcatcttctcaagctgcagaagac
ataaactccgatgatgaccttggtcaggaaacgattttgagtccttcaatgccagcaaca
actattgatacggtgttggagaaggcaaatgtagcctatgagaatgagtctcagcaagag
tgtgaggacattcttgattctgttcgcgattgttattttgaagaattagagagaaagact
tcccagtccatcagcaacaatcgttcatgcagaagttcatcgagtatgattattcctcag
ctggatggctccaatgatgatccaaacccctttccttttgttaatgattcatctgaaaca
tataaaaaattcgggagatcttcccaagcagattcatggaataaggctactttagctacc
aacaataagcacagaaacaaaagaccaggatggtgctctttacccattgctttgggtcag
aatctgaatgattcacatccaaatccagttcacacacctagcagtcacatctgtgacgaa
agagctggcaggcgaacttcttctcacatgaattttaacgaacagcctaattttctaaca
agaaatttgaataaatctgctaattgtgaagaaaaatctagtaccatagttgaatgttct
acacgtgacttgatgagggtaaaaagatcctatcaggctgagccttctgaatatggaaat
caggtaaaaaaggtacaaattggtgccgaaggaagagaagattcttttctttattcagaa
tccaatcatgacaagaaagagaagaggcttcgtgattccttgatatcgcgaacagctatc
acagatcaaccaagagaatgtaatgagaggagctcatatcttgcacttcagttgcaggct
gagcctggtgatattaaagctgacaaatcaaattgtccttcatattgtaagttgccactt
tcatccagctctctgctgacaaatgcatcaaaagatggagtgcttctttcttctgaagga
cctcatgttgaggttgtcagcagagcatctgcaggttttcagaggagtgcatcaacatca
caagggactaaagatatattccagcttcctgatgttgagaatcaaaaatctactatttac
atgggaagctgtggatgctgtagtcgcgaaaatgttgacagctgtatgaaatgtttaagt
caatatcctgctggtcctagtcattcaatatctacagtaactggtgtatctggtgacgtt
tcggaacttataggtatgaccttcagcaagaaacctcctaaggcggaattcacagatgaa
cctggacgcagtgttcaatctgcccgtggtgcccctagttaccatgtggtgaaaaataaa
acaaggacatgtgttcaggatagagatttagatgaatgcccccctttctttgaggggaat
gaccttgtaggagaaaagatatgcagtattaagtatggaacagatgactacgctcattgt
caagacagtgtgttgggtgtacctgttcactatcaaaatgatgggtcttatctatacatg
ttgactcctgtgtattcaccaccacgaagtgaatgtgttcggcaatggctgtcagttgat
tgcatagattcttctaaaatggatgtagtttcgggcccaccaatgaatccatcaacaaag
gtttgctctgatgatgtagcagaattacaggattctcaatctacctttggtgatcagcct
ttgatggattcagcttctgcttcagaaccaaatacaaatcaacttcaagctaaagaaaat
tgtcaggaaagcactggtgtccatgatgcaagaatgaaacagcaagatgaagagattatt
ttgaaatacaatccatcactgggtggatctcaaaatctctcccagatatccggtcctgat
agaaaatcaaggctaactccattaagtcaaactggttttcgagacccggctagtattggt
tgtggacagcagttaacaatattgagcatagaggtccaagcagaatccaggggtgatctg
aaacctgatcctcgatttgatgctgtaagaatcgttgttcttttttttcaggaagatgat
gattttagatctgatactcatgtacttttgcattgcaatggtgaatctgttcaaagggac
cttgatggagtatctgaatgtaaagttttaactttctctgaagagaggcaagtattcttt
catttcataaagattattaaatcttttgaccctgacatatttatgggctgggatattcaa
ggtggttcccttggttttcttgctgaaagggctgcataccttggcattggtttgcttaac
aaaatatctcgctctccatctgagggcaacatagcttctagagactctgaaggaggaaaa
ctaagtgatattttttctgatgctgttgctgctgacccaatgtctcatgaagatgctgca
ataatcgatgatgaatggggccgaactcacgccagtggcgtccatgtagggggtagaatt
gtccttaacatttggcgactgatgcgtggtgaagtgaagctgaacttgtacacacttgaa
gccgtggctgaagctgtgctgagacgaaaaattccatatattcctaacaaggtattgaca
aattggtttttaagtggtcctggacgtgctagatacagatgtatagaatactttttagag
agggcaaagctgaaccttcagatcatgaatcaactcgatgtggtaaatcgaacatcagag
cttgcacgaatttttggcattgactttttttcagttctttctcggggttcacagtaccgt
gttgaatcaatgtttctgaggcttgctcatgcacaaaattatgttgccatttctcctgga
aaccaacaagttgcttctcaacctgccatggaatgtataccccttgtcatggaaccaaaa
tctggattttatgcagaccctgttgtcgttttggattttcagtcactttatccatccatg
ataattgcttataacctctgcttctgtacttgccttggtaaagttacttctacgaaagcc
aacatcctcggtgttagttcatattcacctgataaaaatgtggtgcataatttaaaggat
gaaatattgctcactccaaatggtgttatgtatgtgcctcccagggtccggaagggggta
ctacctcgcttgttggaagaaattttagatactaggatcatggttaaaacagcaatgaag
aaattggctcctggacagcaagttcttcaccggatattcaatgcaagacaacttgctttg
aagctaatagcaaatgtgacctatgggtatacagctgctggatttagtggacgcatgccc
tgtgctgagcttgctgacagtattgtccagtgtggccgcagaacattggaatgtgcaatt
tcatttgttaacacaaatcataggtggaatgctaaagttatttatggtgatacggacagt
atgtttgtactcctcgaaggacggtccgttgaagaagcttttcgaattggtcatgaaatt
gcatcagaagtaactgcaatgaacccaaatccagtcacgttaaagatggaaaaggtttac
gattcgtgcttcctccttactaagaaacgatatgttggttatagttatgagaacattgtc
caaagcaaaccagtctttgatgctaaaggtattgagacagtacgcagagatacatgtggg
gctgtgtccaagataatggagcgctctttaagagtcttttttgaatacagggatattcag
aaggtgaaatcttacctggtgcgtcagtggaaaaagattatttcaggcagagtatctctt
caggattttgtgtttgcaaaagaggtacgcttaggcacctattctgcacagacttcttca
cttccaccagcagcaattgttgccactaaagcaatgagagttgaccctagggcagaacct
cggtatgcagaacgagtgccttatgttgtggttcatggtgaacctggtgccaggttggct
gatgtagtggtagatcccttggatgtcctttcaattgattcaccttacaggctaaatgac
atatattacatcaagaaacagataatcccagctctgcaacgagtatttgggctcgttcga
gccgacttgaatcagtggttttcagatatgccccgtacagagagggaggttgccggtaaa
cgtcacctggttgctgcaaatgctcacagaactagaattgattattactatctgtcaaaa
cattgtatcatatgcggtgagctgatccaggcatctagttacgtctgtcaaaactgctcc
agaaatgaagctgttgttgctgctgctttaacaggaagaacttcaatgttggaaagaaac
atccaacaccttgctgctatatgtcggcactgtggaggaggagattggttcgtagaaagt
ggggtgaaatgcacatctcttgcatgttctgttttctacgaaaggaggaaagtccagaaa
gaactgcaatctctttctgctgttactacagacacaggtttttatcctaggtgtgtggtg
gaatggttctaa
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integrated database retrieval system
