Capsicum annuum (peppers): 107839625
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Entry
107839625 CDS
T04646
Name
(RefSeq) serine/arginine-rich splicing factor SR30 isoform X2
KO
K12890
serine/arginine-rich splicing factor 1
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107839625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cann03041
]
107839625
Spliceosome [BR:
cann03041
]
Common components
Common spliceosomal components
SR proteins
107839625
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
FlhF_2nd
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
107839625
NCBI-ProteinID:
XP_016538685
LinkDB
All DBs
Position
8:complement(154313597..154323475)
Genome browser
AA seq
309 aa
AA seq
DB search
MPFVLVSSTRNSLVSYLVGNMGRLSRTIYVGNLPGDIREREVEDLFYKYGPIVEIDLKVP
PRPPGYAFVEFEDPRDAEDAIRGRDGCDFDGHRLRVELAHGGRRPSSYDRHSSYSSYSSG
SRGGLSRRSDYRVMVSGLPSSASWQDLKDHMRRAGDVCFSQVFRDRDGMRGIVDYTNYDD
MKYAIKKLDDSLFRNQFSRSYIRVDRYDKRHSYSRSPSPYYSRSRSYSRSRSPRLSYSRS
VSPRGRYHRRSVSLSPSRSLSPARSFSRSISRSRSPLSPPRHRRYARSPSPSRSRSRSLS
YSRSSEISY
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgccatttgttcttgtttcgtctactagaaattctctcgtctcgtatctcgttggcaat
atgggtcgtctaagtcggactatctacgtcggaaatcttcctggtgatattcgggagaga
gaagtagaagatttgttttacaagtatgggcccattgtggaaattgatttgaaagttccc
cccaggccacctggttatgcgttcgtagagtttgaagatccccgtgatgctgaggatgcc
atccgtgggcgtgatggctgtgactttgacggacatcgtttgcgagttgaacttgcgcat
ggtgggcgaagaccatcatcatatgatcgccacagtagttatagtagttacagtagtggg
agtcgtggtggactttctaggcgctctgactatcgtgtaatggtgtctggactaccatct
tctgcttcatggcaagacttgaaggatcacatgcgacgagctggagatgtctgtttctct
caagttttccgagatcgtgacggtatgcgagggattgtggactataccaactatgacgat
atgaaatatgcgataaagaaacttgatgactctctgtttcgcaatcaattctctcgatca
tatattagggtggacaggtatgataagaggcatagctattccaggagtccaagtccatat
tattcaagaagcagaagttactcaagaagcaggagtcctcgactaagctatagcagaagt
gtatctcctaggggtagataccatcgtcgctctgtctctctctcaccctcaaggtctctt
tcccctgctcgctctttctcaagatccatatcaagatccagatctccactttcacctccg
cgtcaccggaggtatgcaaggagccccagcccaagcaggagccggagcaggagtctctcc
tattctcgctcttcggagatatcctactga
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