Capsicum annuum (peppers): 107839968
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Entry
107839968 CDS
T04646
Name
(RefSeq) upstream activation factor subunit spp27-like isoform X1
KO
K15223
upstream activation factor subunit UAF30
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cann03021
]
107839968
Transcription machinery [BR:
cann03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
107839968
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SWIB
DEK_C
Vma22_CCDC115
Motif
Other DBs
NCBI-GeneID:
107839968
NCBI-ProteinID:
XP_047254030
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All DBs
Position
1:complement(153711394..153725027)
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AA seq
309 aa
AA seq
DB search
MVSDSVLIERLRQILTVSDLETATAGTVRRKLEEEFGVDLLDRKAFVRDQIDVFLRTHVQ
ETPNDDVQEVEDVKEEEEKESVENDDNSSETGSKKKARRSEKVNGEEKRKGGFYKPCALS
PQLQKLVGEPELGRPEVVKKIWAYIWEKKLQNPQNKRKILCDDVLSGIFRAKAIDMFQMN
KALSKHIWPIDEKDAAEVKSSVKRTQKQGREEALDEPKQKEKRQKGGGSGFLAPVRLSDA
LVKFFGTRENSLPRAEVIKRIWQYIKDNELQDPSDKKTIICDEQLKELFQVDSFHGFTVM
KLLTTHFVK
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcggattctgtgttaattgaacggctccggcaaatactaacagtttctgacctt
gaaacggccactgccgggactgttcgtcggaagcttgaggaggaatttggggttgattta
cttgataggaaagcgtttgtaagggaccaaatcgatgtttttcttcgaacccatgttcaa
gaaactccaaatgatgacgtacaagaagtagaggatgtgaaggaagaggaagagaaagaa
tctgtggagaatgatgataattcgagtgagactgggtcaaagaagaaagcgagaaggtct
gagaaagtgaatggagaagaaaagagaaaagggggattttataaaccatgtgcactttct
ccacagcttcagaaattggttggcgagccagaacttggcagaccagaggtcgtcaagaag
atttgggcctatatctgggagaagaaattacaaaatccacagaacaagcggaaaatttta
tgtgatgatgttttgagtggaatttttcgggccaaagcaatagacatgttccagatgaac
aaggcgctatccaagcatatttggcccatagatgagaaagatgccgctgaagtcaaatct
tctgtgaagaggacacagaaacaaggcagagaagaagctttagatgagccaaagcagaaa
gagaaaaggcagaaaggtggaggatctggctttcttgctccagttcgattgtcagatgct
cttgtgaaattctttggtactagagaaaattccttgccgcgagctgaggttatcaagcga
atatggcaatatataaaagataatgagctgcaggatccatctgataagaagacaattatc
tgtgatgaacagttgaaagaactatttcaagttgattcattccatggcttcacagttatg
aaactgttgactactcattttgtcaaatga
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