Capsicum annuum (peppers): 107840105
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Entry
107840105 CDS
T04646
Name
(RefSeq) KH domain-containing protein HEN4
KO
K21444
poly(rC)-binding protein 3/4
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cann03019
]
107840105
Messenger RNA biogenesis [BR:
cann03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
107840105
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
107840105
NCBI-ProteinID:
XP_016539320
LinkDB
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Position
8:162964771..162971316
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AA seq
647 aa
AA seq
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MHKISIATSTVMHENTVAVSGSNSTAADAVDDGADNSTLTPPLPRRIVFRLLCHASRVGG
VIGKSGSIIRQLQQDTSAKIHVDVSTNSDHHRLIVVVASALLNKRIRLLGPNEECDEIEV
SAAQEALVKVFERVIEVTAENNGVVLGAENVVSCRLLVKGNQVGALMGKGGKVIDTIRRE
NGCRIKVLTSGKMPSCASPNDEIVEIEGDILAVKKGLVAVSRRLQDCFSVDRNRTAENPS
LELDSEQTLPPQPVDLPGQRSSMPQPISTSSFSGASGCHPVSLDADKFSSIDSKMPLQEV
AFRVLCPNDKVGAIIGKGGAIVKALQNDSGASIAVGPNVAECNERMISVTALENLELRKS
PAQIAVVLVFERILDAGSGMNLGTRSLITFRLVVANSQVGCLLGKGGAIISDIRKETGTS
IRIFRGDQVPRCVSVNDEVVQIAGEFVNVQDALRNVTGRLRDNLLAAKVSNGVCRNNSLA
SESSPSGQMKEPPFGFHRSGGVTHAMNQHPDLTRSIDNLVLSNKTDHPPSSGLWSSQTRP
GANQRGAFDVSKGSNSVKGGIELGSGSRSAIVTNTTVEIMVPENIVSCVYGENKSNLTRL
RQISGARVVVHEPRPGAGDRIIVISGTPDETQAAQSLLQAFILAESP
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgcacaaaatttctattgctactagtacagtaatgcacgaaaatactgttgccgtctcc
ggctccaactccaccgccgcagacgccgtggacgacggcgccgacaattcaacccttaca
ccaccattaccgagacgtattgttttccgactactctgtcacgcttcacgcgtcggagga
gttatcggaaagtcaggttcaattatcagacaacttcaacaagatacttccgctaaaatt
cacgttgatgtttccacaaactccgaccaccaccgcctcatagttgttgtagcctccgct
ttgttaaacaagaggataaggctattgggaccaaatgaagaatgtgatgaaattgaagtt
tcggcggcacaggaagcacttgttaaggtttttgagagggtaatagaagtaactgcggaa
aataatggagtagttttgggagcggagaatgttgtgtcgtgtaggttattagtgaagggg
aatcaagtaggggcgttgatgggtaaaggtgggaaagtaattgatacaataaggagggaa
aatggatgtaggattaaggtattaacttcaggaaaaatgccaagttgtgcttcacccaat
gatgaaattgtcgagatagaaggggatattctggctgtcaagaaaggacttgtcgctgtc
agtcgccgtcttcaagattgtttctctgttgataggaatagaacggctgagaatccatca
cttgagttagattcagagcagactttgcctcctcaacctgttgatctacctggacaaagg
agttcaatgccacagccaataagcacaagctctttctcaggtgcctctggatgccatcct
gtgtcactagatgctgacaagttttccagcattgattcaaaaatgccattacaagaggtt
gctttcagggttctctgcccaaatgataaggtaggggctataattggcaagggtggagca
attgttaaggctcttcagaatgacagcggagcaagcattgctgttgggcccaatgttgct
gagtgcaatgagagaatgataagtgttactgcattagagaatctagaattacggaaatct
ccagcacaaatcgctgttgttcttgtttttgagcggattctggacgctggctctgggatg
aatttgggcacaagatcattaattacatttcgacttgtggtggcaaatagccaagttggt
tgtttattgggaaagggaggtgcaataatttcagatatcaggaaggagactggtaccagc
atacgaatatttagaggtgaccaagttcctaggtgtgtctcagtcaatgatgaagttgta
cagattgcaggtgagtttgtaaatgtgcaagatgctttacgaaatgtcactggtcggttg
cgtgataatctcttggcagcgaaggtgtccaatggtgtctgcagaaacaactccttggca
tctgaaagtagtccctctggccaaatgaaggaacctccttttggatttcatcggtctggt
ggtgtcacacatgccatgaatcagcatcctgacttaacgcggtctattgataaccttgta
ctttccaacaagacagatcatcccccatcatcagggctgtggtcatcacagacacgaccc
ggagcaaatcaaagaggtgcttttgatgtcagcaaaggatctaattcagttaaaggcggc
atagaactgggaagtggaagcagatctgccattgtgaccaatactactgtggagatcatg
gttcctgaaaacattgtcagctgtgtgtatggggagaacaagagcaacttgactcgttta
agacagatttccggagcaagggttgtggtacacgagccccgtcctggagcaggtgacagg
attattgtgatctctgggacaccagatgaaacccaggcagctcagagcctccttcaggcc
ttcatactagctgaatcaccctaa
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