Capsicum annuum (peppers): 107840471
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Entry
107840471 CDS
T04646
Name
(RefSeq) squalene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
cann
Capsicum annuum (peppers)
Pathway
cann00100
Steroid biosynthesis
cann00909
Sesquiterpenoid and triterpenoid biosynthesis
cann01100
Metabolic pathways
cann01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
107840471
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
107840471
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cann01006
]
107840471
Enzymes [BR:
cann01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
107840471
Prenyltransferases [BR:
cann01006
]
Terpene biosynthesis
Squalene/phytoene synthase
107840471
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
DUF2172
Motif
Other DBs
NCBI-GeneID:
107840471
NCBI-ProteinID:
NP_001311515
UniProt:
Q9XF02
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Position
8:170596808..170604380
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AA seq
411 aa
AA seq
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MGTLRAILKNPDDLYPLIKLKLAARHAEKQIPPEPHWGFCYLMLQKVSRSFALVIQQLPV
ELRDAVCIFYLVLRALDTVEDDTSIPTDVKVPILISFHQHIYDREWHFSCGTKEYKVLMD
QFHHVSTAFLELGKNYQQAIEDITMRMGAGMAKFICKEVETTDDYDEYCHYVAGLVGLGL
SKLFHASGKEDLASDSLSNSMGLFLQKTNIIRDYLEDINEVPKCRMFWPREIWSKYVNKL
EELKYEENSVKAVQCLNDMVTNALSHVEDCLIYMSNLRDPAIFRFCAIPQVMAIGTLAMC
YDNIEVFRGVVKMRRGLTAKAIDRTRTMADVYGAFFDFSCMLKSKVNNNDPNATKTLKRL
EAILKTCRDSGTLNKRKSYVIKSEPTYSPVLIFVIFIILAIILAHLSGNRS
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggggactttgagagcgattttgaagaatccagatgatttgtatccattgataaagcta
aaactagcggctcgacatgccgaaaagcagatcccgccggagccacattggggattctgt
tacttaatgcttcaaaaagtctctcgtagttttgctctcgtcattcaacagcttcctgtc
gagcttcgtgatgctgtatgcatattctatttggtccttagagcacttgacactgtcgag
gatgataccagcattcccacggatgttaaagtacctattctgatctcttttcatcagcat
atctatgatcgtgaatggcacttttcatgtggtacaaaggagtacaaggttctcatggac
cagttccatcatgtctcaactgcttttctggaacttggaaaaaattatcagcaagcaatt
gaggatattaccatgaggatgggtgcaggaatggcaaaatttatatgcaaggaggtggaa
acaaccgatgattatgacgaatattgtcactacgtagctgggcttgttgggctaggattg
tcaaaactgttccatgcatctgggaaagaagatctggcttcagattctctctccaactcc
atgggtttatttcttcagaaaacaaacatcattagagattatctggaagacataaatgaa
gtacccaagtgccgtatgttttggccccgtgagatttggagtaaatatgttaacaagctt
gaggagttaaagtatgaggagaactcggtcaaggcagtgcaatgtcttaatgacatggtc
accaatgctttgtcacatgtagaagattgtttgatttacatgtccaatttgcgtgatcct
gccatctttcgattctgtgctattccacaggtcatggcaattgggactttagctatgtgc
tatgacaacattgaagtcttcagaggagtggttaaaatgagacgtggtctgacagctaag
gccattgaccggactagaactatggctgatgtatatggtgctttttttgacttctcttgt
atgctgaaatccaaggttaataataatgatccaaatgcaacaaaaactttgaagaggctt
gaagcaatcctgaaaacttgcagagactcgggaaccttgaataaaaggaaatcttacgta
atcaagagcgagcctacttacagtccagttctgatctttgtcatcttcatcatactggct
attattcttgcacacctatctggaaaccgctcttag
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