KEGG   Capsicum annuum (peppers): 107840471
Entry
107840471         CDS       T04646                                 
Name
(RefSeq) squalene synthase
  KO
K00801  farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21]
Organism
cann  Capsicum annuum (peppers)
Pathway
cann00100  Steroid biosynthesis
cann00909  Sesquiterpenoid and triterpenoid biosynthesis
cann01100  Metabolic pathways
cann01110  Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:cann00001]
 09100 Metabolism
  09103 Lipid metabolism
   00100 Steroid biosynthesis
    107840471
  09109 Metabolism of terpenoids and polyketides
   00909 Sesquiterpenoid and triterpenoid biosynthesis
    107840471
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:cann01006]
    107840471
Enzymes [BR:cann01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.21  squalene synthase
     107840471
Prenyltransferases [BR:cann01006]
 Terpene biosynthesis
  Squalene/phytoene synthase
   107840471
SSDB
Motif
Pfam: SQS_PSY DUF2172
Other DBs
NCBI-GeneID: 107840471
NCBI-ProteinID: NP_001311515
UniProt: Q9XF02
LinkDB
Position
8:170596808..170604380
AA seq 411 aa
MGTLRAILKNPDDLYPLIKLKLAARHAEKQIPPEPHWGFCYLMLQKVSRSFALVIQQLPV
ELRDAVCIFYLVLRALDTVEDDTSIPTDVKVPILISFHQHIYDREWHFSCGTKEYKVLMD
QFHHVSTAFLELGKNYQQAIEDITMRMGAGMAKFICKEVETTDDYDEYCHYVAGLVGLGL
SKLFHASGKEDLASDSLSNSMGLFLQKTNIIRDYLEDINEVPKCRMFWPREIWSKYVNKL
EELKYEENSVKAVQCLNDMVTNALSHVEDCLIYMSNLRDPAIFRFCAIPQVMAIGTLAMC
YDNIEVFRGVVKMRRGLTAKAIDRTRTMADVYGAFFDFSCMLKSKVNNNDPNATKTLKRL
EAILKTCRDSGTLNKRKSYVIKSEPTYSPVLIFVIFIILAIILAHLSGNRS
NT seq 1236 nt   +upstreamnt  +downstreamnt
atggggactttgagagcgattttgaagaatccagatgatttgtatccattgataaagcta
aaactagcggctcgacatgccgaaaagcagatcccgccggagccacattggggattctgt
tacttaatgcttcaaaaagtctctcgtagttttgctctcgtcattcaacagcttcctgtc
gagcttcgtgatgctgtatgcatattctatttggtccttagagcacttgacactgtcgag
gatgataccagcattcccacggatgttaaagtacctattctgatctcttttcatcagcat
atctatgatcgtgaatggcacttttcatgtggtacaaaggagtacaaggttctcatggac
cagttccatcatgtctcaactgcttttctggaacttggaaaaaattatcagcaagcaatt
gaggatattaccatgaggatgggtgcaggaatggcaaaatttatatgcaaggaggtggaa
acaaccgatgattatgacgaatattgtcactacgtagctgggcttgttgggctaggattg
tcaaaactgttccatgcatctgggaaagaagatctggcttcagattctctctccaactcc
atgggtttatttcttcagaaaacaaacatcattagagattatctggaagacataaatgaa
gtacccaagtgccgtatgttttggccccgtgagatttggagtaaatatgttaacaagctt
gaggagttaaagtatgaggagaactcggtcaaggcagtgcaatgtcttaatgacatggtc
accaatgctttgtcacatgtagaagattgtttgatttacatgtccaatttgcgtgatcct
gccatctttcgattctgtgctattccacaggtcatggcaattgggactttagctatgtgc
tatgacaacattgaagtcttcagaggagtggttaaaatgagacgtggtctgacagctaag
gccattgaccggactagaactatggctgatgtatatggtgctttttttgacttctcttgt
atgctgaaatccaaggttaataataatgatccaaatgcaacaaaaactttgaagaggctt
gaagcaatcctgaaaacttgcagagactcgggaaccttgaataaaaggaaatcttacgta
atcaagagcgagcctacttacagtccagttctgatctttgtcatcttcatcatactggct
attattcttgcacacctatctggaaaccgctcttag

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