Capsicum annuum (peppers): 107840744
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Entry
107840744 CDS
T04646
Name
(RefSeq) probable polygalacturonase At1g80170
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
cann
Capsicum annuum (peppers)
Pathway
cann00040
Pentose and glucuronate interconversions
cann01100
Metabolic pathways
Module
cann_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107840744
Enzymes [BR:
cann01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
107840744
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Motif
Other DBs
NCBI-GeneID:
107840744
NCBI-ProteinID:
XP_016540130
UniProt:
A0A1U8E9X9
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Position
9:217452595..217463246
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AA seq
414 aa
AA seq
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MCSSNTSYTMKTLVLLFILIGLTDSRIYSASIFGNAESFNVLDYGAAADGITDDSQALLN
AWNAACSSSAGSAEVVIPPNMIFFLSPVILRGPCNSENIYFVISGTLVSPGSPSTWTGQD
SSQWLAFRNVTGLIVDGSGTIDGQGQRWWDQSCRYHPEMDGCTRLAPTALKFIFCTQSSI
SNMYFANSAQTHILIERCNGFKVDNVMIQSPGNSPNTDGIHIQASQYVDITNSKISSGDD
CISIGDYSSNVQIYNIQCGPGHGISIGSLGKHGNSAQVENIHVSNAFFHGTTNGARIKTW
QVGRGYVRDVIFENLEFNSVKNPIIIDQNYCDVRGACKEMVTGVQVSNVVYQNIVGTSSS
DIAINLNCSISVPCTDITMQFIQLTPATSGRKVKAYCRNANGQEYGIEPGPCLS
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtgttcttctaacacttcatatactatgaaaactttggttctcttgttcattttaatt
ggcttgacagattcaagaatatacagtgcaagtatatttggaaatgcagaaagttttaat
gtcctggattatggagctgctgctgatggcattacagatgattctcaagcattacttaat
gcttggaatgctgcatgttcatcatcagctggatctgctgaagtggttattcctccaaat
atgatattttttcttagccctgtgatactcagaggcccctgcaattccgaaaacatctat
tttgtgatatcaggtacacttgtttcaccaggctcacctagtacatggaccgggcaagac
tcgagtcagtggttggctttcagaaatgttactggtctaatcgtcgatggctcaggaacc
attgatggtcaaggacaaagatggtgggatcaatcatgtcgataccaccctgaaatggac
ggatgcacaagattagctccaactgccttgaagttcattttttgcactcagagttcaatc
agtaacatgtactttgcaaacagtgcacaaactcatatacttatagagagatgcaatggc
tttaaagtggacaatgtaatgattcaatctccaggaaatagtccaaatactgatggcatt
catattcaagcttctcaatatgtggacataacaaattctaaaattagcagtggagatgat
tgtatttcaattggagattactcttctaatgtccaaatatacaacattcaatgtggacca
ggtcatggtataagtattggaagcttaggaaaacatggtaattctgctcaagtagagaac
attcatgtgagcaatgctttcttccatggaactacgaacggagctcgtatcaagacatgg
caggttggcagaggatatgtacgcgatgtcatatttgagaatcttgaatttaactccgtc
aagaatcccatcataatcgaccagaattactgtgatgttcgaggggcttgcaaggaaatg
gtaactggagtgcaagtcagcaatgttgtttatcagaacatagttggaacatcgagctcg
gatatcgcgataaatttgaactgcagcatttcagtgccatgtactgatataacaatgcag
ttcatacaactaacaccagcaacatcaggaaggaaagttaaagcttattgtaggaatgct
aatggccaagaatacggaatcgaacccggtccttgtctctcataa
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