Capsicum annuum (peppers): 107840890
Help
Entry
107840890 CDS
T04646
Name
(RefSeq) oligouridylate-binding protein 1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cann03019
]
107840890
03041 Spliceosome [BR:
cann03041
]
107840890
Messenger RNA biogenesis [BR:
cann03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
107840890
Spliceosome [BR:
cann03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
107840890
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_7
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
107840890
NCBI-ProteinID:
XP_047252564
LinkDB
All DBs
Position
9:complement(<217145475..217155754)
Genome browser
AA seq
406 aa
AA seq
DB search
MMQQQRLKQQQALMQQSLYHPGLLAPPQIEPILSGNLPPGFDSSTCRSVYVGNIHSQVTE
PLLQEVFASTGPLEGCKLIRKDKSSYGFVDYFDRRSAALAIVTLNGRHLFGQPIKVNWAY
ASAQREDTSSHFNIFVGDLSPEVTDATLFACFSVYTSCSDARVMWDQKTGRSRGFGFVSF
RNQQDAQSAINDLNGKWLGSRQIRCNWAAKGAAGANDDMQSSDAKSVVELTAGTSDDGQE
KANEDAPENNPQYTTVYVGNLAPEVTSLDLHRHFHALGAGIIEDVRIQAGKGFGFVRYSS
HAEAARAIQLGNARILFGKPVKCSWGSKPTPPGSSSNPLPPPAIGQLPGISAMDLAAYER
QLALAKMAGMQTLMHPQGQRIGGAPSQAMYDGGYGSIASTQPPMYY
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaacagcaaagactgaaacaacaacaagcattgatgcagcaatccctttatcat
cctggtcttcttgcaccccctcagatagagcccatcttgagcggaaatctgcctcccgga
tttgattctagtacttgcaggagcgtgtatgttggaaacatccactcacaagtcacagaa
ccacttcttcaagaggtttttgccagcaccggtccccttgagggatgcaagctcataaga
aaggacaagtcatcctatggttttgtggattactttgatcgccgatcagctgcgcttgcc
attgtgacgcttaatggaaggcacttgtttggacagccgataaaagttaactgggcgtat
gccagtgcccaaagagaggacacatctagtcattttaacatatttgtgggtgatcttagt
ccggaagttacagatgccacattgtttgcttgcttttcagtatacactagctgctcagat
gcaagagtgatgtgggatcagaaaacaggccgttcaagagggtttgggtttgtttccttc
cgtaatcagcaggatgcccaaagtgctataaacgacttgaatggtaagtggcttggaagc
agacaaatccgctgcaactgggcagcaaaaggtgctgctggagccaatgatgacatgcag
agttcagatgccaaaagtgttgttgaactgacagctggaacgtcagatgatggtcaagag
aaggccaatgaagacgctccagaaaacaatccccagtatacgaccgtttatgttggcaac
cttgctcctgaagttacttcacttgacctccatcgtcattttcatgctcttggagctggt
attattgaagatgtccgtattcaagcaggcaaaggttttggtttcgttaggtacagcagt
cacgctgaagcagctcgagctattcagttgggaaatgctcgaatcctctttggtaaacct
gttaagtgctcgtggggaagcaagccgacaccaccaggaagcagttccaaccccctacca
ccacctgctatcggacaactccccggtatttcagccatggatcttgcagcgtacgagagg
caacttgctttggctaagatggctggtatgcagacactcatgcatccacagggccagcga
attggtggcgctcctagtcaggctatgtatgatggtggctacggaagcattgcttccacg
cagccaccgatgtactactag
DBGET
integrated database retrieval system
