KEGG   Capsicum annuum (peppers): 107840952
Entry
107840952         CDS       T04646                                 
Name
(RefSeq) splicing factor U2af large subunit A isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
cann  Capsicum annuum (peppers)
Pathway
cann03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cann00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107840952
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cann03041]
    107840952
Spliceosome [BR:cann03041]
 Complex A
  U2 snRNP components
   U2 related factors
    107840952
 Complex B
    107840952
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded RRM_PARP14_3
Other DBs
NCBI-GeneID: 107840952
NCBI-ProteinID: XP_016540392
LinkDB
Position
9:complement(216287353..216299706)
AA seq 606 aa
MDSSENGRTQLTPSHTGGENEIAGVDNGEEEHNSSKRRSSSKHSSHDYGGERESSRSRDR
ERDKGRDKDRDRSRDKERDRDREKDRDRRHRDRTERRRTRDRDDDANVSDDGREYWKKDY
DRDRVERHRHRSKSYERERDEGHGHRSKSYDKDREERDRHRSKSYERDREERHGHRSHSR
GRSSHRSRSRSRSRSRSRSKSKRVSGFDMAPPTSALLAGAPAVPASAGILPGTAAAIPGM
LPNMFPLTSGPLGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATYFNHVMSAIG
GNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGTQVKVRRPTDYNPSL
AATLGPSQPNPNLNLAAVGLSPGSTGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRG
FNLVKDKETGNSKGYAFCVYADVSVTDIACAALNGIKMGDKTLTVRRASQGTLQPKPEQE
IVLMHAQQQIALQRLMLQPGGPPTKVLCLTNVVSPDELKDDEDYEDIMEDMRMECGKFGN
LVNLVIPRPRLDGEPTPGVGKVYLEYEDVESSSRAQQGLNGRKFGGNQVVAVFYPENKFA
EGDYEG
NT seq 1821 nt   +upstreamnt  +downstreamnt
atggattccagtgaaaatgggcgaactcagctcactcctagtcatactggtggtgagaac
gaaatagctggtgtggataacggagaagaggaacataactcgagtaagagaagatcaagc
tctaagcacagctcccatgattatgggggcgaaagagagtcttcaagaagcagggatagg
gagagggacaaaggacgtgataaggatagagataggagtagagacaaggaaagggaccgg
gatcgagaaaaagatcgtgaccgtcgccacagagatcggaccgagaggcgtagaactaga
gatagagatgatgatgctaatgtttctgacgatggccgggaatactggaagaaagattat
gatagagacagggtggagaggcacagacataggtcaaaatcttatgagagagagcgggat
gaagggcatggacacaggtccaaatcatacgacaaggatagagaggaaagggatagacac
aggtcgaaatcctatgagagagatcgagaggaaaggcatggacatagatctcactcaagg
ggaagatctagccataggtcaaggtcgcgttctcgatctcggtctcgttcgcgctccaaa
agcaaaagggtcagcgggtttgacatggcacctcctacttctgctctgttagctggtgct
cctgctgttccagcttctgcaggtatactccctggcactgctgcagctattcctggaatg
cttcctaacatgttccctttgacatctggaccgcttggagcacttcctgttatgccagtt
caggcaatgactcagcaggcgactagacatgcaagacgagtttacgttggtggacttcct
cctactgcaaatgaacagtcggtggctacatacttcaatcatgttatgtcggcaattggt
ggaaacaccgccggtccaggagatgctgtcgttaatgtttatataaaccatgagaaaaag
tttgctttcgttgagatgagatccgtggaggaggccagcaatgccatggccttagatggc
attatctttgagggaacacaagttaaggtcagaagaccgaccgactataacccgtctctg
gctgcaactcttggtccgagccaaccaaatccaaaccttaaccttgctgcagtgggacta
tcaccaggatccactggtgggcttgaaggtcctgaccgaatttttgtgggaggcctgcca
tattatttcactgaagctcagattagggagttgctggagtcctttggtcctcttcggggt
tttaatcttgttaaagataaagaaactggaaactcgaaaggctatgcattttgtgtgtac
gctgatgtgtcagtaacagatattgcctgtgcagctcttaatgggattaagatgggtgat
aaaactcttactgtcagacgtgctagtcaaggtactttacagcctaagccagagcaggag
attgtattaatgcatgctcagcaacaaatagcactgcagaggctcatgctccaacctggt
ggacctcctacaaaagtcttatgcctaacaaatgtcgttagcccggatgagctcaaagat
gatgaagactatgaagatataatggaagatatgagaatggaatgtgggaagtttggtaat
ttagtgaatttagtcatcccgcgcccaaggcttgatggtgaacctacaccaggggttgga
aaggtctatttggagtatgaagatgtggagagttcttcaagagctcaacaagggttgaat
ggcagaaaattcggaggaaaccaagttgttgctgtcttttatccagagaacaagttcgcc
gagggggactacgagggctag

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