Capsicum annuum (peppers): 107841044
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Entry
107841044 CDS
T04646
Name
(RefSeq) protein argonaute PNH1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cann03019
]
107841044
03036 Chromosome and associated proteins [BR:
cann03036
]
107841044
Messenger RNA biogenesis [BR:
cann03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
107841044
Chromosome and associated proteins [BR:
cann03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
107841044
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
107841044
microRNA pathway
RISC loading complex
107841044
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
107841044
NCBI-ProteinID:
XP_047252470
LinkDB
All DBs
Position
9:complement(211474970..211494748)
Genome browser
AA seq
946 aa
AA seq
DB search
MPQWQMKLEPQERHMVSRTPLQESMNQNAQCQISEEHSRMEEAVKRNNNAGKRRARRKGK
GILVEKMKDMSNNSEVSSACSASSSSERSIVFPRRPGYGQLGTKCLVKANHFIAELSERN
LSQYSVKITPEVKCTILNKAIIAELVKLHKDVDLGKRIPVFDGRRTIYTAGLLPFNSKEF
TITLGDDDEWIGITKERKFTVTIKFISQANLHQLRELLSGKQVENPPQALKIIDIVLREL
ASQRYISVGRFFYSPNIKKPQTLGNGLQSWRGFYQSIKPTQMGLSLNIDMSTTAFIEPLP
VVEFVAQVLGKDVSSRPLSDADRVKVKKALRGVKVEVTHRGNIRRKYRISGLTSQPTREL
IFPVDEEKNMKSVIEYFQEVYGFTIQYPHLPCLLVGSQKKVNYLPMEACKILEGQRYTKR
LDEKQITSLLKSSCQRPREQELDVLQTIHQNGYKQDPIAKEFGINIDDKLASVEARVLPA
PWLKYHDAGKEKECHPQLGQWNMINKKVINGSTVNHWACINFSCNVQENAARGFCQQLSQ
MCQVSGMEFNSEPVIPIYYARPDQAKKALNYVYNAAASKLGGKELELLIAILPDNNGSLY
GTLKKICETDLGLISQCCLTKHVLKISKQYLSNVSLKINVKMGGRNTVLLDALRWKIPLV
SDIPTIIFGADVTHPESGEDCSPSIAAVVASQDWPEVTKYAGLVCAQPHRQELIQDLYRT
WQDPQRGTMSGGMIRELLLAFKKATGQKPLRIIFYRDGVSDGQFYQVLLYELDAIRKACA
SLEPGYQPPVTFIVVQKRHHTRLLPNNHNDRNHTDRSGNILPGTVVDTKICHPTEFDFYL
CSHAGIQGTSRPAHYHVLWDENNFSADEMQSLTNNLCYTYARCTRSVSVVPPAYYAHLAA
YRARFYVEPDSHGNGSMRSTRATNGSVNVRPLPALKEKVKNVMFYC
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagtggcaaatgaaactagagcctcaggaaaggcatatggtttcaagaactccg
ttgcaagagtcgatgaatcagaacgcgcaatgtcagattagtgaagagcatagtagaatg
gaagaagctgtcaagagaaataataatgcggggaagagaagagctaggaggaaagggaaa
gggatattagtcgaaaaaatgaaggatatgagtaataattctgaggtttcttctgcttgt
tctgcttcatcatcatctgaaagaagtatcgtgttcccacgtaggccggggtatggccag
ttgggtacaaagtgtttggttaaagctaaccatttcattgctgagttatcagaaaggaac
ttaagccaatatagcgtaaaaattactccggaagttaagtgtacaatattgaacaaggct
ataattgcggagttggtaaaacttcataaagatgtcgacttgggtaaaagaattccggtt
tttgatggaagaagaacaatttatacagcaggattgctcccttttaactcgaaagagttc
acaataactcttggcgatgatgatgaatggatcggaatcacaaaggagcgtaaatttact
gtcacgatcaagttcatctcacaggcaaacttgcatcagttacgcgaacttctttcaggg
aagcaggtggaaaatcctccacaagcacttaaaatcattgatattgtgctaagggaactt
gcttctcaaaggtacatatcggttgggagatttttctattctccgaatatcaaaaaacca
caaacactaggtaatggtttacagtcttggcggggattctatcagagcataaaacctact
cagatgggattgtcactcaatattgatatgtcaacaacagccttcattgaacctctcccg
gttgttgagtttgttgctcaagttttgggaaaagacgttagttcaaggccactgtccgat
gcagatcgagtaaaggttaagaaggctctcagaggtgttaaagttgaagttacacacagg
ggaaatattcgaaggaaataccgaatttctggtttgacatcacagcctacaagggagcta
atttttcctgtcgatgaggaaaagaacatgaaatcagtcatcgagtattttcaagaggtg
tatggatttaccattcagtatcctcatctaccttgtctccttgttggaagccaaaagaaa
gtaaattacttgccgatggaggcttgtaagatactcgagggacagagatacaccaaaagg
ttggatgagaagcagataacttcattgttaaaatcgtcgtgccaaagaccacgggaacaa
gaactggacgttttgcagaccattcaccagaatggatacaagcaagatcctattgcaaaa
gagtttggcatcaatattgacgataagcttgcatcagtggaggctcgagtcctcccagca
ccgtggttaaagtaccatgatgcagggaaagaaaaggaatgtcatccacagctaggccaa
tggaacatgataaataagaaagtaattaatggaagtactgtaaaccactgggcttgtatc
aacttctcatgtaacgtccaagaaaacgcagcccgtggcttttgtcaacagctttcccaa
atgtgccaagtctccgggatggaattcaatagtgagccagtgataccgatttattatgca
agaccagatcaggcaaagaaggcactaaattatgtatacaatgctgctgctagtaaactt
ggaggaaaagaattggagctactaattgccattcttcctgataacaatggatctttgtat
ggtactctgaagaaaatatgtgagacagatttggggttgatttctcagtgttgcctaaca
aagcatgtattaaaaattagcaagcaatatctgtcaaatgtatcactgaaaataaatgta
aagatgggaggaagaaacacggtacttttagatgctttgagatggaaaatccctctcgtt
agtgatatcccaacgattatatttggtgctgatgtgactcatccggaatcaggagaggac
tgtagcccatcgattgctgctgttgttgcatcacaagattggccagaagttactaaatat
gccggtttagtgtgtgctcagcctcatagacaagaactcattcaggatctttaccggaca
tggcaagatcctcaacgaggaacaatgtctggagggatgattagagaacttctattggca
ttcaagaaagccacaggacagaaaccactgagaataatattctacagggatggtgtaagt
gatgggcagttttatcaggtcctactttatgaacttgatgcaattcgtaaggcttgtgca
tctcttgaaccaggttaccaacctccagtaaccttcatagtcgttcaaaaacgtcaccac
acacgacttttgccaaataaccacaatgacagaaatcatactgacaggagtggaaacata
ttacctggtaccgtggtggatacaaaaatttgtcatccaactgaatttgatttttactta
tgcagtcatgctggaattcagggaactagtcgtcctgcacactatcatgttctctgggat
gaaaataatttttccgcggatgaaatgcagtctttgacaaacaacctttgttacacatat
gctcgatgcactcgatctgtttcagtagttcctcccgcatattatgcacatttggcggcc
tatagagcgcgtttctacgtggaacctgactcacatggaaatggttcaatgcgtagcacg
cgtgcaacgaatggttctgtcaatgtccggccactaccagcgttgaaagagaaggttaag
aatgtgatgttctattgctag
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