Capsicum annuum (peppers): 107841828
Help
Entry
107841828 CDS
T04646
Name
(RefSeq) sm-like protein LSM1B isoform X1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107841828
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cann03019
]
107841828
Messenger RNA biogenesis [BR:
cann03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107841828
mRNA degradation factors
5'-3' decay
Lsm complex
107841828
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
107841828
NCBI-ProteinID:
XP_016541160
UniProt:
A0A1U8ECW6
LinkDB
All DBs
Position
9:217095823..217099137
Genome browser
AA seq
119 aa
AA seq
DB search
MTDDNLFSSSLASYLDRKILILLRDGREFLGTFRSFDQYANIVLEGTLERIMVGNLFCDI
PLGLYIIRGENVMLIGERESDEKELPPHMTCVSVAEIRKAQKEELKGSTTRKMDFLDFD
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
atgacagatgacaacttattctcatcaagccttgcaagctatcttgatagaaaaattcta
atattactacgagatggtagagaattcttgggaacatttcgttctttcgatcaatatgcg
aatatagtattggaaggtaccttagagagaataatggtgggcaatctgttttgtgacata
cctttgggtctctacattattcgtggagagaatgttatgctcatcggagaacgggaatct
gacgagaaggagcttccgcctcacatgacttgtgtgtcggtagcagaaatcagaaaggct
caaaaggaagaactaaagggttccactacaaggaaaatggattttcttgactttgactag
DBGET
integrated database retrieval system