KEGG   Capsicum annuum (peppers): 107841828
Entry
107841828         CDS       T04646                                 
Name
(RefSeq) sm-like protein LSM1B isoform X1
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
cann  Capsicum annuum (peppers)
Pathway
cann03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cann00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    107841828
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cann03019]
    107841828
Messenger RNA biogenesis [BR:cann03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     107841828
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     107841828
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 107841828
NCBI-ProteinID: XP_016541160
UniProt: A0A1U8ECW6
LinkDB
Position
9:217095823..217099137
AA seq 119 aa
MTDDNLFSSSLASYLDRKILILLRDGREFLGTFRSFDQYANIVLEGTLERIMVGNLFCDI
PLGLYIIRGENVMLIGERESDEKELPPHMTCVSVAEIRKAQKEELKGSTTRKMDFLDFD
NT seq 360 nt   +upstreamnt  +downstreamnt
atgacagatgacaacttattctcatcaagccttgcaagctatcttgatagaaaaattcta
atattactacgagatggtagagaattcttgggaacatttcgttctttcgatcaatatgcg
aatatagtattggaaggtaccttagagagaataatggtgggcaatctgttttgtgacata
cctttgggtctctacattattcgtggagagaatgttatgctcatcggagaacgggaatct
gacgagaaggagcttccgcctcacatgacttgtgtgtcggtagcagaaatcagaaaggct
caaaaggaagaactaaagggttccactacaaggaaaatggattttcttgactttgactag

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